myRT

myRT report for GCA_002102515.1_ASM210251v1

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Seq: MRAZ01000022.1 Francisella tularensis subsp. holarctica strain FDC407 FDC407_22, whole genome shotgun sequence (7363 bp)
Overview 1 RT 1: 2232-7280 bp Neighborhood of RT #1 [2232, 7315] RVT-UG4 DUF2797 COG3415 Feature: gene Location: 2232-2457 bp Feature: gene Location: 2794-5065 bp Feature: gene Location: 5071-5503 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5077-5257 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5077-5257 bp Feature: gene Location: 5744-6559 bp Ori: ORX27106.1 Feature: domain Description: DUF2797 Location: 5846-6542 bp Feature: domain Description: DUF2797 Location: 5846-6542 bp Feature: gene Location: 6935-7315 bp Ori: ORX27107.1 Feature: domain Description: COG3415 Location: 6947-7280 bp Feature: domain Description: COG341 5 Location: 6947-7280 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, DUF2797 (pfam10977), COG3415 (Transposase )

Seq: MRAZ01000024.1 Francisella tularensis subsp. holarctica strain FDC407 FDC407_24, whole genome shotgun sequence (36347 bp)
Overview 1 RT 1: 31604-36280 bp Neighborhood of RT #1 [31604, 36330] rlmL KOG0539 RVT-Retrons DDE_3 Feature: gene Location: 31604-33757 bp Ori: ORX27051.1 Feature: domain Description: rlmL Location: 31616-33752 bp Feature: domain Description: rlmL Location: 31616-33752 bp Feature: gene Location: 33832-34386 bp Ori: ORX27052.1 Feature: domain Description: KOG0539 Location: 33904-34381 bp Feature: domain Description: KOG0539 Location: 33904-34381 bp Feature: gene Location: 35352-35846 bp Ori: ORX27053.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 35370-35682 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 35370-35682 bp Feature: gene Location: 35818-36330 bp Ori: ORX27054.1 Feature: domain Description: DDE_3 Location: 35863-36280 bp Feature: domain Description: DDE_3 Location: 35863-362 80 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rlmL (PRK11783), KOG0539 (KOG0539, Sphingolipid fatty acid hydroxylase ), RVT-Retrons, DDE_3 (pfam13358)

Seq: MRAZ01000017.1 Francisella tularensis subsp. holarctica strain FDC407 FDC407_17, whole genome shotgun sequence (45247 bp)
Overview 1 RT 1: 13579-17178 bp Neighborhood of RT #1 [13579, 17201] RVT-UG4 DsbB SufE Feature: gene Location: 13579-13776 bp Feature: gene Location: 13827-14240 bp Feature: gene Location: 15003-15230 bp Ori: ORX27318.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 15069-15174 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 15069-15174 bp Feature: gene Location: 15542-16078 bp Ori: ORX27319.1 Feature: domain Description: DsbB Location: 15575-16025 bp Feature: domain Description: DsbB Location: 15575-16025 bp Feature: gene Location: 16785-17201 bp Ori: ORX27320.1 Feature: domain Description: SufE Location: 16824-17178 bp Feature: domain Description: SufE Location: 16824-17178 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, DsbB (pfam02600), SufE (pfam02657)