myRT

myRT report for GCA_002102655.1_ASM210265v1

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Seq: MDUK01000011.1 Klebsiella pneumoniae strain Kp45 contig_18, whole genome shotgun sequence (12472 bp)
Overview 1 RT 1: 1-3937 bp Neighborhood of RT #1 [1, 3945] InsA RVT-GII PRK10276 umuC Feature: gene Location: 1-198 bp Feature: domain Description: InsA Location: 4-199 bp Feature: domain Description: InsA Location: 4-1 99 bp Feature: gene Location: 350-1837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 755-1445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 755-1 445 bp Feature: gene Location: 1862-2674 bp Feature: domain Description: PRK10276 Location: 2294-2657 bp Feature: domain Description: PRK1 0276 Location: 2294-2657 bp Feature: gene Location: 2674-3945 bp Feature: domain Description: umuC Location: 2677-3937 bp Feature: domain Description: umuC Location: 2677-3937 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsA (COG3677), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: MDUK01000015.1 Klebsiella pneumoniae strain Kp45 contig_26, whole genome shotgun sequence (747848 bp)
Overview 1 RT 1: 264297-271165 bp Neighborhood of RT #1 [264297, 271167] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 264297-265025 bp Feature: domain Description: FimC Location: 264345-265008 bp Feature: domain Description: FimC Location: 2 64345-2 65008 bp Feature: gene Location: 265057-267666 bp Feature: domain Description: FimD Location: 265114-267655 bp Feature: domain Description: FimD Location: 2 65114-2 67655 bp Feature: gene Location: 267666-269744 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 268074-268518 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 68074-2 68518 bp Feature: gene Location: 269801-270241 bp Feature: domain Description: Integrase_1 Location: 269807-270023 bp Feature: domain Description: Integrase_1 Location: 2 69807-2 7002 3 bp Feature: gene Location: 270502-271167 bp Feature: domain Description: INT_P4_C Location: 270607-271165 bp Feature: domain Description: INT_P4_C Location: 2 70607-2 71165 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: MDUK01000028.1 Klebsiella pneumoniae strain Kp45 contig_45, whole genome shotgun sequence (15582 bp)
Overview 1 RT 1: 4705-7975 bp Neighborhood of RT #1 [4705, 7989] RVT-GII PRK10276 Feature: gene Location: 4705-4920 bp Feature: gene Location: 5187-5417 bp Feature: gene Location: 5651-7162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6056-6770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6056-6770 bp Feature: gene Location: 7213-7446 bp Feature: gene Location: 7564-7989 bp Feature: domain Description: PRK10276 Location: 7567-7975 bp Feature: domain Description: PRK10276 Location: 7567-7975 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)