myRT

myRT report for GCA_002104015.1_ASM210401v1

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Seq: MWJH01000020.1 Clostridium botulinum strain SU1033 CbotD0113-U21308_20, whole genome shotgun sequence (2498 bp)
Overview 1 RT 1: 585-2265 bp Neighborhood of RT #1 [585, 2411] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 585-2411 bp Ori: OSB07961.1 Feature: domain Description: RVT_N Location: 642-879 bp Feature: domain Description: RVT_N Location: 642-879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 942-1596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 942-1 596 bp Feature: domain Description: GIIM Note: maturase Location: 1659-1893 bp Feature: domain Description: GIIM Note: maturase Location: 1 659-1 893 bp Feature: domain Description: HNHc Note: nucleases Location: 2100-2265 bp Feature: domain Description: HNHc Note: nucleases Location: 21 00-2265 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: MWJH01000002.1 Clostridium botulinum strain SU1033 CbotD0113-U21308_2, whole genome shotgun sequence (755219 bp)
Overview 1 RT 1: 433413-438580 bp Neighborhood of RT #1 [433413, 438762] Uup PBP2_LTTR_substrate RVT-GII Beta-lactamase AcrR Feature: gene Location: 433413-434891 bp Ori: OSB14186.1 Feature: domain Description: Uup Location: 433416-434886 bp Feature: domain Description: Uup Location: 433416-434886 bp Feature: gene Location: 435391-435609 bp Feature: domain Description: PBP2_LTTR_substrate Location: 435406-435589 bp Feature: domain Description: PBP2 _LTTR_substrate Location: 435406-435589 bp Feature: gene Location: 435747-435965 bp Ori: OSB14187.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 435753-435882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 435753-435882 bp Feature: gene Location: 436596-437693 bp Ori: OSB14490.1 Feature: domain Description: Beta-lactamase Location: 436638-437637 bp Feature: domain Description: Beta-lactamase Location: 436638-437637 bp Feature: gene Location: 438154-438762 bp Ori: OSB14188.1 Feature: domain Description: AcrR Location: 438169-438580 bp Feature: domain Description: AcrR Location: 438169-438580 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Uup (COG0488), PBP2_LTTR_substrate (cd05466), RVT-GII, Beta-lactamase (pfam00144), AcrR (COG1309)