myRT

myRT report for GCA_002104455.1_ASM210445v1

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Seq: NBOC01000004.1 Colwellia chukchiensis strain CGMCC 1.9127 scaffold4, whole genome shotgun sequence (263380 bp)
Overview 1 RT 1: 143231-147869 bp Neighborhood of RT #1 [143231, 148126] OmpR RVT_N RVT-GII GIIM YbjD YbjD Feature: gene Location: 143231-143905 bp Feature: domain Description: OmpR Location: 143234-143897 bp Feature: domain Description: OmpR Location: 1 43234-1 43897 bp Feature: gene Location: 144630-144797 bp Feature: gene Location: 144775-146247 bp Feature: RT Description: RVT_N Location: 144823-145066 bp Feature: RT Description: RVT_N Location: 1 44823-1 45066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145111-145738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 451 1 1 -1 45738 bp Feature: domain Description: GIIM Note: maturase Location: 145798-146023 bp Feature: domain Description: GIIM Note: maturase Location: 1 45798-1 46023 bp Feature: gene Location: 146334-146462 bp Feature: gene Location: 146513-148126 bp Feature: domain Description: YbjD Location: 146573-146735 bp Feature: domain Description: YbjD Location: 1 46573-1 46735 bp Feature: domain Description: YbjD Location: 147359-147869 bp Feature: domain Description: YbjD Location: 1 47359-1 47869 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OmpR (COG0745), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), YbjD (COG3593)