myRT

myRT report for GCA_002107465.1_ASM210746v1

Download annotations/find similar RTs

Seq: NBRX01000018.1 Salmonella enterica subsp. enterica serovar Newport strain NY_FSL S10-1060 NODE_18_length_81518_cov_45.3194_ID_3561, whole genome shotgun sequence (81518 bp)
Overview 1 RT 1: 46467-51765 bp Neighborhood of RT #1 [46467, 51767] RVT-Retrons Arm-DNA-bind_3 trmE Feature: gene Location: 46467-46676 bp Feature: gene Location: 47094-47963 bp Feature: gene Location: 48289-49221 bp Ori: OSG68152.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 48445-48988 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 48445-48988 bp Feature: gene Location: 49303-50069 bp Feature: domain Description: Arm-DNA-bind_3 Location: 49309-49489 bp Feature: domain Description: Arm-DNA-bind_3 Location: 49309-49489 bp Feature: gene Location: 50403-51767 bp Ori: OSG68124.1 Feature: domain Description: trmE Location: 50406-51765 bp Feature: domain Description: trmE Location: 50406-51 765 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Arm-DNA-bind_3 (pfam13356), trmE (PRK05291)

Seq: NBRX01000006.1 Salmonella enterica subsp. enterica serovar Newport strain NY_FSL S10-1060 NODE_6_length_335036_cov_42.4197_ID_3537, whole genome shotgun sequence (335036 bp)
Overview 1 RT 1: 245481-252363 bp Neighborhood of RT #1 [245481, 252363] reactive_PduG Tra5 RVT-UG8 RVT-UG3 PRK09678 Feature: gene Location: 245481-246186 bp Feature: domain Description: reactive_PduG Location: 245484-245757 bp Feature: domain Description: reactive_PduG Location: 2 45484-2 45757 bp Feature: gene Location: 246197-246976 bp Feature: domain Description: Tra5 Location: 246269-246971 bp Feature: domain Description: Tra5 Location: 2 462 69-2 46971 bp Feature: gene Location: 247656-249674 bp Ori: OSG73608.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 248229-248682 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2 482 2 9-2 48682 bp Feature: gene Location: 249665-250942 bp Ori: OSG73609.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 249953-250448 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 2 49953-2 50448 bp Feature: gene Location: 251330-251602 bp Ori: OSG73610.1 Feature: domain Description: PRK09678 Location: 251339-251495 bp Feature: domain Description: PRK09678 Location: 2 51339-2 51495 bp Feature: gene Location: 251602-252363 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT reactive_PduG (TIGR04491), Tra5 (COG2801), RVT-UG8, RVT-UG3, PRK09678 (DNA-binding transcriptional regulator; Provisional)