myRT

myRT report for GCA_002107635.1_ASM210763v1

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Seq: NBRW01000003.1 Salmonella enterica subsp. enterica serovar Rubislaw strain NY_FSL S10-1000 NODE_3_length_633557_cov_54.0709_ID_2305, whole genome shotgun sequence (633557 bp)
Overview 1 RT 1: 536596-542016 bp Neighborhood of RT #1 [536596, 542120] PRK15246 RVT-UG8 PRK09678 Feature: gene Location: 536596-537354 bp Ori: OSG64653.1 Feature: domain Description: PRK15246 Location: 536656-537352 bp Feature: domain Description: PRK1 5246 Location: 536656-537352 bp Feature: gene Location: 537402-537596 bp Feature: gene Location: 538174-540192 bp Ori: OSG64655.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 538747-539200 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 538747-539200 bp Feature: gene Location: 540183-541461 bp Feature: gene Location: 541848-542120 bp Ori: OSG64656.1 Feature: domain Description: PRK09678 Location: 541857-542016 bp Feature: domain Description: PRK09678 Location: 541 857-54201 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15246 (fimbrial assembly chaperone), RVT-UG8, PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: NBRW01000010.1 Salmonella enterica subsp. enterica serovar Rubislaw strain NY_FSL S10-1000 NODE_10_length_146506_cov_34.7766_ID_2319, whole genome shotgun sequence (146506 bp)
Overview 1 RT 1: 91885-95172 bp Neighborhood of RT #1 [91885, 95195] HTH_XRE RVT_N RVT-GII YkfC HNHc PRK09738 Feature: gene Location: 91885-92172 bp Feature: gene Location: 92266-92535 bp Ori: OSG59937.1 Feature: domain Description: HTH_XRE Location: 92281-92383 bp Feature: domain Description: HTH_XRE Location: 92 2 81-92 383 bp Feature: gene Location: 92786-94459 bp Ori: OSG59938.1 Feature: domain Description: RVT_N Location: 92846-93089 bp Feature: domain Description: RVT_N Location: 92 846-93089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93134-93776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93134-93776 bp Feature: domain Description: YkfC Location: 93905-94076 bp Feature: domain Description: YkfC Location: 93905-94076 bp Feature: domain Description: HNHc Note: nucleases Location: 94274-94436 bp Feature: domain Description: HNHc Note: nucleases Location: 942 74-94436 bp Feature: gene Location: 94481-94672 bp Feature: gene Location: 95016-95195 bp Ori: OSG60000.1 Feature: domain Description: PRK09738 Location: 95019-95172 bp Feature: domain Description: PRK09738 Location: 95019-95172 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), PRK09738 (small toxic polypeptide; Provisional)