myRT

myRT report for GCA_002108275.1_ASM210827v1

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Seq: NBOJ01000038.1 Klebsiella pneumoniae strain ARPG-318 plasmid unnamed2 contig38, whole genome shotgun sequence (1915 bp)
Overview 1 RT 1: 120-1463 bp Neighborhood of RT #1 [120, 1855] RVT-GII Feature: gene Location: 120-371 bp Feature: gene Location: 371-1855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 773-1463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 773-1 463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NBOJ01000021.1 Klebsiella pneumoniae strain ARPG-318 contig21, whole genome shotgun sequence (221900 bp)
Overview 1 RT 1: 42915-48219 bp Neighborhood of RT #1 [42915, 48221] PRK10276 umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 42915-43334 bp Ori: OSH55068.1 Feature: domain Description: PRK10276 Location: 42918-43329 bp Feature: domain Description: PRK102 76 Location: 42 918-4332 9 bp Feature: gene Location: 43336-44601 bp Ori: OSH55069.1 Feature: domain Description: umuC Location: 43339-44599 bp Feature: domain Description: umuC Location: 43339-44599 bp Feature: gene Location: 45553-46182 bp Ori: OSH55229.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 45556-46003 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 45556-46003 bp Feature: gene Location: 46383-47051 bp Ori: OSH55070.1 Feature: domain Description: PRK09951 Location: 46386-47049 bp Feature: domain Description: PRK09951 Location: 46386-47049 bp Feature: gene Location: 47256-48221 bp Ori: OSH55071.1 Feature: domain Description: PRK15110 Location: 47259-48219 bp Feature: domain Description: PRK15110 Location: 472 59-482 19 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)

Seq: NBOJ01000031.1 Klebsiella pneumoniae strain ARPG-318 contig31, whole genome shotgun sequence (210065 bp)
Overview 1 RT 1: 138007-141065 bp Neighborhood of RT #1 [138007, 141067] RVT-Retrons HTH_XRE DinI Feature: gene Location: 138007-138201 bp Feature: gene Location: 138200-138631 bp Feature: gene Location: 138770-139720 bp Ori: OSH49721.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 138950-139493 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13 8950-13 9493 bp Feature: gene Location: 139698-140006 bp Ori: OSH49722.1 Feature: domain Description: HTH_XRE Location: 139710-139875 bp Feature: domain Description: HTH_XRE Location: 13 9710-13 9875 bp Feature: gene Location: 140627-141067 bp Ori: OSH49723.1 Feature: domain Description: DinI Location: 140882-141065 bp Feature: domain Description: DinI Location: 140882-141065 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HTH_XRE (smart00530), DinI (pfam06183)