myRT

myRT report for GCA_002108395.1_ASM210839v1

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Seq: NBOP01000026.1 Klebsiella pneumoniae strain ARPG-489 contig026, whole genome shotgun sequence (249508 bp)
Overview 1 RT 1: 39-6787 bp Neighborhood of RT #1 [39, 6789] RVT-GII PRK10276 umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 39-1403 bp Ori: OSH97411.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 321-1011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 321 -1 01 1 bp Feature: gene Location: 1483-1902 bp Ori: OSH97185.1 Feature: domain Description: PRK10276 Location: 1486-1897 bp Feature: domain Description: PRK1 0276 Location: 1 486-1 897 bp Feature: gene Location: 1904-3169 bp Ori: OSH97186.1 Feature: domain Description: umuC Location: 1907-3167 bp Feature: domain Description: umuC Location: 1 907-31 67 bp Feature: gene Location: 3325-3582 bp Feature: gene Location: 4121-4750 bp Ori: OSH97412.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 4124-4571 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 41 24-4571 bp Feature: gene Location: 4951-5619 bp Ori: OSH97188.1 Feature: domain Description: PRK09951 Location: 4954-5617 bp Feature: domain Description: PRK09951 Location: 4954-561 7 bp Feature: gene Location: 5824-6789 bp Ori: OSH97189.1 Feature: domain Description: PRK15110 Location: 5827-6787 bp Feature: domain Description: PRK1 51 1 0 Location: 5827-6787 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)

Seq: NBOP01000043.1 Klebsiella pneumoniae strain ARPG-489 contig043, whole genome shotgun sequence (141212 bp)
Overview 1 RT 1: 138007-141065 bp Neighborhood of RT #1 [138007, 141067] RVT-Retrons HTH_XRE DinI Feature: gene Location: 138007-138201 bp Feature: gene Location: 138200-138631 bp Feature: gene Location: 138770-139720 bp Ori: OSH92238.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 138950-139493 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 138950-139493 bp Feature: gene Location: 139698-140006 bp Ori: OSH92239.1 Feature: domain Description: HTH_XRE Location: 139710-139875 bp Feature: domain Description: HTH_XRE Location: 139710-139875 bp Feature: gene Location: 140627-141067 bp Ori: OSH92242.1 Feature: domain Description: DinI Location: 140882-141065 bp Feature: domain Description: DinI Location: 140882 -141065 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HTH_XRE (smart00530), DinI (pfam06183)

Seq: NBOP01000107.1 Klebsiella pneumoniae strain ARPG-489 plasmid unnamed58 contig107, whole genome shotgun sequence (25910 bp)
Overview 1 RT 1: 17577-21322 bp Neighborhood of RT #1 [17577, 21324] PRK10276 RVT-GII Antirestrict Feature: gene Location: 17577-18002 bp Ori: OSH86082.1 Feature: domain Description: PRK10276 Location: 17580-17988 bp Feature: domain Description: PRK10276 Location: 17580-17988 bp Feature: gene Location: 18156-18407 bp Feature: gene Location: 18407-19915 bp Ori: OSH86084.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18809-19523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18809-19523 bp Feature: gene Location: 20149-20379 bp Feature: gene Location: 20899-21324 bp Ori: OSH86085.1 Feature: domain Description: Antirestrict Location: 21034-21322 bp Feature: domain Description: Antirestrict Location: 2103 4-213 22 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)