myRT

myRT report for GCA_002108615.1_ASM210861v1

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Seq: MTEG01000034.1 Raoultella sp. YJ Scaffold32_1, whole genome shotgun sequence (3232 bp)
Overview 1 RT 1: 2-3176 bp Neighborhood of RT #1 [2, 3229] RVT-GII GIIM PHA02517 DEDD_Tnp_IS110 Feature: gene Location: 2-364 bp Feature: gene Location: 658-2181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 931-1663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 931 -1 663 bp Feature: domain Description: GIIM Note: maturase Location: 1738-1936 bp Feature: domain Description: GIIM Note: maturase Location: 1 738-1 936 bp Feature: gene Location: 2346-2504 bp Feature: domain Description: PHA02517 Location: 2349-2469 bp Feature: domain Description: PHA0251 7 Location: 2349-2469 bp Feature: gene Location: 2723-3229 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 2762-3176 bp Feature: domain Description: DEDD_Tnp_IS1 1 0 Location: 2762-31 76 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), DEDD_Tnp_IS110 (pfam01548)

Seq: MTEG01000010.1 Raoultella sp. YJ Scaffold8_2, whole genome shotgun sequence (95882 bp)
Overview 1 RT 1: 77271-85173 bp Neighborhood of RT #1 [77271, 85217] PRK09692 RVT-UG5 PRK04247 RMtype1_S_EcoKI-TRD1-CR1_like RMtype1_S_EcoKI-TRD1-CR1_like Feature: gene Location: 77271-77438 bp Feature: gene Location: 77547-78809 bp Feature: domain Description: PRK09692 Location: 77556-78753 bp Feature: domain Description: PRK09692 Location: 77556-78753 bp Feature: gene Location: 79112-82129 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 79610-80105 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 79610-80105 bp Feature: gene Location: 82307-83407 bp Feature: domain Description: PRK04247 Location: 82367-82601 bp Feature: domain Description: PRK042 47 Location: 82 367-82 601 bp Feature: gene Location: 83418-85217 bp Feature: domain Description: RMtype1_S_EcoKI-TRD1-CR1_like Location: 83733-84297 bp Feature: domain Description: RMtype1_S_EcoKI-TRD1-CR1_like Location: 83733-842 97 bp Feature: domain Description: RMtype1_S_EcoKI-TRD1-CR1_like Location: 84807-85173 bp Feature: domain Description: RMtype1_S_EcoKI-TRD1-CR1_like Location: 84807-85173 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-UG5, PRK04247 (endonuclease NucS), RMtype1_S_EcoKI-TRD1-CR1_like (cd17252)