myRT

myRT report for GCA_002108845.1_ASM210884v1

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Seq: NAFF01000106.1 Bradyrhizobium canariense strain UBMA182 Contig106, whole genome shotgun sequence (232402 bp)
Overview 1 RT 1: 72021-78652 bp Neighborhood of RT #1 [72021, 79242] PRK09579 fkbM_fam RVT-GII Resolvase Recombinase Zn_ribbon_recom Feature: gene Location: 72021-75125 bp Ori: OSI87879.1 Feature: domain Description: PRK09579 Location: 72024-75051 bp Feature: domain Description: PRK09579 Location: 72024-75051 bp Feature: gene Location: 75246-75437 bp Ori: OSI87746.1 Feature: domain Description: fkbM_fam Location: 75324-75417 bp Feature: domain Description: fkbM_fam Location: 75324-7541 7 bp Feature: gene Location: 75688-76642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76126-76297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 761 26-76297 bp Feature: gene Location: 77042-77113 bp Feature: gene Location: 77539-79242 bp Ori: OSI87747.1 Feature: domain Description: Resolvase Location: 77569-77992 bp Feature: domain Description: Resolvase Location: 77569-77992 bp Feature: domain Description: Recombinase Location: 78061-78427 bp Feature: domain Description: Recombinase Location: 78061 -78427 bp Feature: domain Description: Zn_ribbon_recom Location: 78505-78652 bp Feature: domain Description: Zn_ribbon_recom Location: 78505-78652 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09579 (multidrug efflux RND transporter permease subunit), fkbM_fam (TIGR01444), RVT-GII, Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)

Seq: NAFF01000041.1 Bradyrhizobium canariense strain UBMA182 Contig41, whole genome shotgun sequence (22936 bp)
Overview 1 RT 1: 11790-16916 bp Neighborhood of RT #1 [11790, 16930] TesB RVT-GII PLN02864 ACAD_FadE2 Feature: gene Location: 11790-12650 bp Ori: OSI98351.1 Feature: domain Description: TesB Location: 11802-12642 bp Feature: domain Description: TesB Location: 11802 -12 642 bp Feature: gene Location: 13073-13297 bp Feature: gene Location: 13278-13484 bp Ori: OSI98353.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13281-13479 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132 81-13479 bp Feature: gene Location: 14695-15555 bp Ori: OSI98354.1 Feature: domain Description: PLN02864 Location: 14704-15532 bp Feature: domain Description: PLN02 864 Location: 14704-15532 bp Feature: gene Location: 15704-16930 bp Ori: OSI98358.1 Feature: domain Description: ACAD_FadE2 Location: 15728-16916 bp Feature: domain Description: ACAD_FadE2 Location: 1572 8-16916 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TesB (COG1946), RVT-GII, PLN02864 (enoyl-CoA hydratase), ACAD_FadE2 (cd01155)

Seq: NAFF01000076.1 Bradyrhizobium canariense strain UBMA182 Contig76, whole genome shotgun sequence (76755 bp)
Overview 1 RT 1: 58653-67639 bp Neighborhood of RT #1 [58653, 67683] GalE RVT-GII RVT-CRISPR-like RT_G2_intron Big_6 Big_6 W_rich_C W_rich_C ArpD Feature: gene Location: 58653-59192 bp Feature: gene Location: 59770-60789 bp Ori: OSI95035.1 Feature: domain Description: GalE Location: 59818-60766 bp Feature: domain Description: GalE Location: 59818-60766 bp Feature: gene Location: 61342-61493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61393-61492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 613 93 -61492 bp Feature: gene Location: 62039-62745 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 62273-62447 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 62273 -62447 bp Feature: domain Description: RT_G2_intron Location: 62657-62702 bp Feature: domain Description: RT_G2_intron Location: 62657-62702 bp Feature: gene Location: 63203-65653 bp Ori: OSI95036.1 Feature: domain Description: Big_6 Location: 63965-64169 bp Feature: domain Description: Big_6 Location: 63 965-64169 bp Feature: domain Description: Big_6 Location: 64193-64439 bp Feature: domain Description: Big_6 Location: 64193 -6443 9 bp Feature: domain Description: W_rich_C Location: 64544-64874 bp Feature: domain Description: W_rich_C Location: 64544-64874 bp Feature: domain Description: W_rich_C Location: 64964-65294 bp Feature: domain Description: W_rich_C Location: 64964-65294 bp Feature: gene Location: 65980-67683 bp Ori: OSI95052.1 Feature: domain Description: ArpD Location: 65989-67639 bp Feature: domain Description: ArpD Location: 65989-6763 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GalE (COG1087), RVT-GII, RVT-CRISPR, RT_G2_intron (cd01651), Big_6 (pfam17936), W_rich_C (pfam07483), ArpD (COG4618)