myRT

myRT report for GCA_002109605.1_ASM210960v1

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Seq: ADIK01000088.1 Escherichia coli M056 supercont1.88, whole genome shotgun sequence (2227 bp)
Overview 1 RT 1: 586-2127 bp Neighborhood of RT #1 [586, 2162] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 586-1926 bp Ori: OSK12857.1 Feature: domain Description: RVT_N Location: 634-871 bp Feature: domain Description: RVT_N Location: 634-871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 922-1564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 922-1 564 bp Feature: domain Description: GIIM Note: maturase Location: 1615-1849 bp Feature: domain Description: GIIM Note: maturase Location: 1 61 5-1 849 bp Feature: gene Location: 1893-2162 bp Ori: OSK12858.1 Feature: domain Description: HNHc Note: nucleases Location: 1968-2127 bp Feature: domain Description: HNHc Note: nucleases Location: 1 968-21 27 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: ADIK01000006.1 Escherichia coli M056 supercont1.6, whole genome shotgun sequence (354440 bp)
Overview 1 RT 1: 26582-32613 bp Neighborhood of RT #1 [26582, 32750] SfsB RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 26582-26722 bp Ori: OSK31932.1 Feature: domain Description: SfsB Location: 26591-26663 bp Feature: domain Description: SfsB Location: 2 6591-2 6663 bp Feature: gene Location: 26719-27189 bp Feature: gene Location: 27536-30745 bp Ori: OSK31934.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 28064-28553 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 8064-2 8553 bp Feature: domain Description: nitrilase Location: 30059-30656 bp Feature: domain Description: nitrilase Location: 30059-30656 bp Feature: gene Location: 31040-31843 bp Ori: OSK31935.1 Feature: domain Description: AbiEi_3_N Location: 31073-31334 bp Feature: domain Description: AbiEi_3_N Location: 31073-31334 bp Feature: domain Description: AbiEi_3 Location: 31346-31802 bp Feature: domain Description: AbiEi_3 Location: 31346-31802 bp Feature: gene Location: 31830-32750 bp Ori: OSK31936.1 Feature: domain Description: AbiEii Location: 31872-32613 bp Feature: domain Description: AbiEii Location: 31872 -32 613 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SfsB (COG3423), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: ADIK01000118.1 Escherichia coli M056 supercont1.118, whole genome shotgun sequence (916 bp)
Overview 1 RT 1: 70-760 bp Neighborhood of RT #1 [70, 879] RVT-GII GIIM Feature: gene Location: 70-879 bp Ori: OSK09270.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73-478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73 -478 bp Feature: domain Description: GIIM Note: maturase Location: 559-760 bp Feature: domain Description: GIIM Note: maturase Location: 559-760 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: ADIK01000104.1 Escherichia coli M056 supercont1.104, whole genome shotgun sequence (1424 bp)
Overview 1 RT 1: 1-862 bp Neighborhood of RT #1 [1, 862] RVT-GII Feature: gene Location: 1-862 bp Ori: OSK10461.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 205-862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 205-862 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: ADIK01000102.1 Escherichia coli M056 supercont1.102, whole genome shotgun sequence (1475 bp)
Overview 1 RT 1: 36-1293 bp Neighborhood of RT #1 [36, 1367] RVT-GII GIIM Feature: gene Location: 36-1367 bp Ori: OSK10467.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 321-1008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 321-1008 bp Feature: domain Description: GIIM Note: maturase Location: 1125-1293 bp Feature: domain Description: GIIM Note: maturase Location: 1125 -1293 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)