myRT

myRT report for GCA_002109875.1_ASM210987v1

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Seq: ADKA01000005.1 Escherichia coli TA008 supercont1.5, whole genome shotgun sequence (9348 bp)
Overview 1 RT 1: 5988-8648 bp Neighborhood of RT #1 [5988, 8656] PHA02517 RVT-GII GIIM Tra5 Feature: gene Location: 5988-6455 bp Feature: domain Description: PHA02517 Location: 6054-6393 bp Feature: domain Description: PHA0251 7 Location: 6054-6393 bp Feature: gene Location: 6752-6865 bp Feature: gene Location: 7239-7832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7242-7596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7242-7596 bp Feature: domain Description: GIIM Note: maturase Location: 7671-7827 bp Feature: domain Description: GIIM Note: maturase Location: 7671 -7827 bp Feature: gene Location: 7884-8114 bp Feature: gene Location: 8225-8656 bp Feature: domain Description: Tra5 Location: 8231-8648 bp Feature: domain Description: Tra5 Location: 8231 -8648 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Tra5 (COG2801)

Seq: ADKA01000046.1 Escherichia coli TA008 supercont1.46, whole genome shotgun sequence (483125 bp)
Overview 1 RT 1: 252693-257391 bp Neighborhood of RT #1 [252693, 257393] LldP PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 252693-254246 bp Feature: domain Description: LldP Location: 252705-254238 bp Feature: domain Description: LldP Location: 2 52 705-2 542 38 bp Feature: gene Location: 254676-255050 bp Feature: domain Description: PHA02517 Location: 254679-255039 bp Feature: domain Description: PHA02 517 Location: 2 54679-2 55039 bp Feature: gene Location: 255245-256120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 255248-255602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 552 48-2 55602 bp Feature: domain Description: GIIM Note: maturase Location: 255677-255896 bp Feature: domain Description: GIIM Note: maturase Location: 2 55677-2 55896 bp Feature: gene Location: 256949-257133 bp Feature: domain Description: PHA02517 Location: 257075-257132 bp Feature: domain Description: PHA02 517 Location: 2 57075-2 57132 bp Feature: gene Location: 257067-257393 bp Feature: domain Description: InsE Location: 257070-257391 bp Feature: domain Description: InsE Location: 2 57070-2 57391 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LldP (COG1620), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: ADKA01000007.1 Escherichia coli TA008 supercont1.7, whole genome shotgun sequence (1017 bp)
Overview 1 RT 1: 1-985 bp Neighborhood of RT #1 [1, 1017] RVT-GII Feature: gene Location: 1-1017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 253-985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 253 -985 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: ADKA01000006.1 Escherichia coli TA008 supercont1.6, whole genome shotgun sequence (1079 bp)
Overview 1 RT 1: 361-1079 bp Neighborhood of RT #1 [361, 1079] RVT-GII Feature: gene Location: 361-474 bp Feature: gene Location: 510-632 bp Feature: gene Location: 671-1079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 929-1079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 929-1079 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: ADKA01000049.1 Escherichia coli TA008 supercont1.49, whole genome shotgun sequence (32189 bp)
Overview 1 RT 1: 17329-19308 bp Neighborhood of RT #1 [17329, 19340] DDE_Tnp_IS66_C InsE RVT-GII trans_reg_C Feature: gene Location: 17329-17514 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 17383-17491 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 17383-17491 bp Feature: gene Location: 17534-17779 bp Feature: domain Description: InsE Location: 17549-17768 bp Feature: domain Description: InsE Location: 175 49-17768 bp Feature: gene Location: 17985-18242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18090-18180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18090-18180 bp Feature: gene Location: 18426-18767 bp Feature: gene Location: 19065-19340 bp Feature: domain Description: trans_reg_C Location: 19110-19308 bp Feature: domain Description: trans_reg_C Location: 19110-19308 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), InsE (COG2963), RVT-GII, trans_reg_C (cd00383)