myRT

myRT report for GCA_002110175.1_ASM211017v1

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Seq: ADIZ01000046.1 Escherichia coli TA447 supercont1.46, whole genome shotgun sequence (236580 bp)
Overview 1 RT 1: 90692-95540 bp Neighborhood of RT #1 [90692, 95540] DUF4942 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT_N RVT-GII YkfC HNHc TnpB_IS66 Feature: gene Location: 90692-91324 bp Feature: domain Description: DUF4942 Location: 90965-91214 bp Feature: domain Description: DUF4942 Location: 90965-91 21 4 bp Feature: gene Location: 91245-92867 bp Feature: domain Description: LZ_Tnp_IS66 Location: 91443-91659 bp Feature: domain Description: LZ_Tnp_IS66 Location: 91 443-91 659 bp Feature: domain Description: zf-IS66 Location: 91680-91812 bp Feature: domain Description: zf-IS66 Location: 91 680-91 81 2 bp Feature: domain Description: DDE_Tnp_IS66 Location: 91857-92712 bp Feature: domain Description: DDE_Tnp_IS66 Location: 91 857-9271 2 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 92733-92844 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 92733-92844 bp Feature: gene Location: 92776-94446 bp Feature: RT Description: RVT_N Location: 92824-93067 bp Feature: RT Description: RVT_N Location: 92824-93067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93112-93754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 931 1 2-93754 bp Feature: domain Description: YkfC Location: 93886-94090 bp Feature: domain Description: YkfC Location: 93886-94090 bp Feature: domain Description: HNHc Note: nucleases Location: 94252-94411 bp Feature: domain Description: HNHc Note: nucleases Location: 94252-9441 1 bp Feature: gene Location: 95044-95355 bp Feature: domain Description: TnpB_IS66 Location: 95071-95350 bp Feature: domain Description: TnpB_IS66 Location: 95071 -95350 bp Feature: gene Location: 95355-95540 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4942 (pfam13708), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), TnpB_IS66 (pfam05717)