myRT

myRT report for GCA_002112065.1_ASM211206v1

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Seq: MTZF01000001.1 Pseudomonas syringae pv. actinidiae strain NZ45 BV361_1, whole genome shotgun sequence (6686240 bp) Associated domains: PLN02278 (succinic semialdehyde dehydrogenase), IS285 (COG3328), RVT-GII, GIIM (pfam08388), GDH_like_2 (cd12164), GabT (COG0160), UvrD_C (pfam13361), RVT-UG9, DDE_3 (pfam13358), upstrm_HI1419 (TIGR02683)
Tra5 (COG2801), COG3666 (Transposase ), DDE_Tnp_1_6 (pfam13751), RVT-Retrons, ComA-like_MBL-fold (cd07731), trans_reg_C (cd00383), PRK10756 (protein CreA), TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005)
DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), CbiG (COG2073), CobJ (COG1010), MltB (TIGR02282), PG_binding_1 (pfam01471), ArfA (COG3036), holA (TIGR01128), Glyco_tranf_2_4 (pfam13704), PagL (pfam09411)
DDE_Tnp_1 (pfam01609), YkgJ (COG0727), HTH_MlrA-CarA (cd01104), YbbK (COG1683), YbgA (COG3272), TIGR02450 (tryptophan-rich conserved hypothetical protein), COG3380 (Predicted NAD/FAD-dependent oxidoreductase ), PRK05693 (SDR family oxidoreductase), LbH_gamma_CA_like (cd04645), YdhL (COG3313)
YhhQ (COG1738), PurT (COG0027), BtuE (COG0386), Toluene_X (pfam03349), Hpt (pfam01627), FliK (COG3144), fliL (PRK12785), PRK12467 (peptide synthase; Provisional), A_NRPS (cd05930), FhuE (COG4773)
PRK10378 (inactive ferrous ion transporter periplasmic protein EfeO; Provisional), tat_substr_1 (TIGR01412), type_I_sec_TolC (TIGR01844), solA (PRK11259), ALDH_KGSADH (cd07129), LysR (COG0583), HTH_Tnp_1 (pfam01527), Nuc_deoxyrib_tr (pfam05014), KOG2143 (KOG2143, Uncharacterized conserved protein ), Haemagg_act (smart00912)
Fil_haemagg (pfam05594), FHA_bHelix (sd00046), fil_hemag_20aa (TIGR01731), Peptidase_C39A (cd02549), YdhU (COG4117), TAT_signal (pfam10518), bact_SO_family_Moco (cd02108), cyc_pep_trnsptr (TIGR01194), PRK09257 (aromatic amino acid transaminase), PRK05298 (excinuclease ABC subunit UvrB)
gltX (PRK14895), FadM (COG0824), NERD (pfam08378), DEXXQc_Upf1-like (cd17934), TauA (COG4521), PRK07044 (aldolase II superfamily protein; Provisional), CHASE3 (pfam05227), Tar (COG0840), PBP1_rhizopine_binding_like, PQQ_membr_DH (TIGR03074)
GltB3 (COG0070), GltS_FMN (cd02808), SsuD (COG2141), GT_2_like_f (cd04182), RutF (TIGR03615), PRK13968 (putative succinate semialdehyde dehydrogenase; Provisional), PRK11074 (putative DNA-binding transcriptional regulator; Provisional), PBP2_YofA_SoxR_like (cd08442), 5beta-POR_like_SDR_a (cd08948), Nudix_Hydrolase_10 (cd04667)
GAF_2 (pfam13185), PRK10060 (cyclic di-GMP phosphodiesterase), PRK15441 (peptidyl-prolyl cis-trans isomerase C; Provisional), PilU (COG5008), PRK12423 (LexA repressor; Provisional), Tas (COG0667), HisM (COG0765), PBP2_Mlr3796_like (cd13695), Hemerythrin (TIGR00058), CysI (TIGR02041)
COG3749 (Uncharacterized conserved protein, DUF934 family ), PRK11778 (putative inner membrane peptidase; Provisional), PhoE (COG0406), FGGY_D-XK_1 (cd07809), bac_FRK (cd01167), PGM_like3 (cd05801), DinG (COG1199), dinG (PRK11747), rad3 (TIGR00604), OprD (pfam03573)
PRK11551 (putative 3-hydroxyphenylpropionic transporter MhpT; Provisional), SphA (COG4313), PRK12428 (coniferyl-alcohol dehydrogenase), modC_ABC (TIGR02142), Top1 (COG3569), Intron_maturas2 (pfam01348), HNHc (smart00507), DUF2625 (pfam10946), AtoC (COG2204), ligand_gated_channel (cd01347)
ExbD (pfam02472), NUC1 (COG1864), Acetyltransf_10 (pfam13673), Acetyltransf_18 (pfam18014), ALDH_CddD_SSP0762 (cd07138), PRK10260 (L,D-transpeptidase; Provisional), YidJ (COG2388), Alanine_zipper (pfam11839), PRK00153 (YbaB/EbfC family nucleoid-associated protein), PRK07994 (DNA polymerase III subunits gamma and tau; Validated)
COG3748 (Uncharacterized membrane protein ), Tsx (COG3248), MutK (COG2354), PRK11169 (leucine-responsive transcriptional regulator Lrp), PRK10791 (peptidylprolyl isomerase B), lipid_A_lpxH (TIGR01854), efflux_EmrB (TIGR00711), PRK15136 (multidrug efflux MFS transporter periplasmic adaptor subunit EmrA), fadA (TIGR02445), FadB (TIGR02437)
RdgC (pfam04381), YfeH (COG0385), PRK06814 (acyl---phospholipid O-acyltransferase), PRK04914 (RNA polymerase-associated protein RapA), DUF2177 (pfam09945), CvfB (COG2996), MFS_spinster_like (cd17328), COG4191 (Signal transduction histidine kinase regulating C4-dicarboxylate transport system ), DsbA_FrnE (cd03024), PRK06102 (amidase)
GntR (pfam00392), TrHb1_N (cd00454), DUF3034 (pfam11231), RfbB (COG1088), pgi (PRK14097), COG3662 (Uncharacterized conserved protein, DUF2236 family ), PRK05656 (acetyl-CoA C-acetyltransferase), PRK10712 (PTS system fructose-specific transporter subunits IIBC; Provisional), PTS_IIB_fructose (cd05569), PTS_IIC_fructo (TIGR01427)
Bfr (COG2193), PRK05321 (nicotinate phosphoribosyltransferase; Provisional), nadE (TIGR00552), COG3241 (Azurin ), YebA (COG1305), PRK03757 (YceI family protein), DUF2269 (pfam10027), RlmJ (COG2961), GAF (smart00065), PAS (smart00091)
PRK00058 (peptide-methionine (S)-S-oxide reductase MsrA), PRK12483 (threonine dehydratase; Reviewed), PRK00702 (ribose-5-phosphate isomerase RpiA), PAAR_motif (pfam05488), VgrG (COG3501), DUF2345 (pfam10106)