myRT

myRT report for GCA_002113525.1_ASM211352v1

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Seq: NEIJ01000008.1 Pseudomonas sp. R14(2017) R14_8, whole genome shotgun sequence (280019 bp)
Overview 1 RT 1: 90362-96591 bp Neighborhood of RT #1 [90362, 96608] SUA5 Smf RVT_N RVT-GII YkfC HNH def fmt Feature: gene Location: 90362-90919 bp Feature: domain Description: SUA5 Location: 90380-90917 bp Feature: domain Description: SUA5 Location: 90380-9091 7 bp Feature: gene Location: 90962-92089 bp Feature: domain Description: Smf Location: 91031-92081 bp Feature: domain Description: Smf Location: 91 031 -92081 bp Feature: gene Location: 93295-95001 bp Feature: RT Description: RVT_N Location: 93352-93595 bp Feature: RT Description: RVT_N Location: 93352-93595 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93640-94273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93640-94273 bp Feature: domain Description: YkfC Location: 94474-94636 bp Feature: domain Description: YkfC Location: 94474-94636 bp Feature: domain Description: HNH Note: nucleases Location: 94813-94951 bp Feature: domain Description: HNH Note: nucleases Location: 9481 3-94951 bp Feature: gene Location: 95109-95615 bp Feature: domain Description: def Location: 95112-95598 bp Feature: domain Description: def Location: 951 1 2-95598 bp Feature: gene Location: 95676-96608 bp Feature: domain Description: fmt Location: 95679-96591 bp Feature: domain Description: fmt Location: 95679-96591 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SUA5 (pfam03481), Smf (COG0758), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), def (PRK00150), fmt (TIGR00460)