myRT

myRT report for GCA_002114155.1_ASM211415v1

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Seq: NBYN01000010.1 Cylindrospermopsis raciborskii CENA303 NODE_69_length_114421_cov_341.268, whole genome shotgun sequence (114421 bp)
Overview 1 RT 1: 52238-58036 bp Neighborhood of RT #1 [52238, 58050] RNR_II_monomer RVT_N RVT-GII GIIM RTPR DUF3598 Feature: gene Location: 52238-52621 bp Feature: gene Location: 52905-53168 bp Feature: domain Description: RNR_II_monomer Location: 52968-53163 bp Feature: domain Description: RNR_II_monomer Location: 52968-531 63 bp Feature: gene Location: 53790-55031 bp Feature: RT Description: RVT_N Location: 53802-53955 bp Feature: RT Description: RVT_N Location: 53802-53955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53967-54573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53967-54573 bp Feature: domain Description: GIIM Note: maturase Location: 54651-54888 bp Feature: domain Description: GIIM Note: maturase Location: 54651 -54888 bp Feature: gene Location: 55119-57170 bp Feature: domain Description: RTPR Location: 55125-57144 bp Feature: domain Description: RTPR Location: 551 25-571 44 bp Feature: gene Location: 57196-58050 bp Feature: domain Description: DUF3598 Location: 57205-58036 bp Feature: domain Description: DUF3598 Location: 57205-58036 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RNR_II_monomer (cd01676), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), RTPR (TIGR02505), DUF3598 (pfam12204)

Seq: NBYN01000055.1 Cylindrospermopsis raciborskii CENA303 NODE_48_length_177911_cov_335.827, whole genome shotgun sequence (177911 bp)
Overview 1 RT 1: 38024-43441 bp Neighborhood of RT #1 [38024, 43443] MviM QueC RVT_N RVT-GII GIIM DUF3157 TlyC Feature: gene Location: 38024-39103 bp Feature: domain Description: MviM Location: 38090-39041 bp Feature: domain Description: MviM Location: 38090-39041 bp Feature: gene Location: 39303-39983 bp Feature: domain Description: QueC Location: 39306-39969 bp Feature: domain Description: QueC Location: 39306-39969 bp Feature: gene Location: 40116-41792 bp Feature: RT Description: RVT_N Location: 40143-40371 bp Feature: RT Description: RVT_N Location: 40143-40371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40407-41067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40407-41067 bp Feature: domain Description: GIIM Note: maturase Location: 41169-41400 bp Feature: domain Description: GIIM Note: maturase Location: 41169-41400 bp Feature: gene Location: 42470-43171 bp Feature: domain Description: DUF3157 Location: 42845-43001 bp Feature: domain Description: DUF3157 Location: 42 845-43001 bp Feature: gene Location: 43267-43443 bp Feature: domain Description: TlyC Location: 43303-43441 bp Feature: domain Description: TlyC Location: 43303-43441 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MviM (COG0673), QueC (pfam06508), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF3157 (pfam11355), TlyC (COG1253)

Seq: NBYN01000031.1 Cylindrospermopsis raciborskii CENA303 NODE_77_length_98284_cov_336.136, whole genome shotgun sequence (98284 bp)
Overview 1 RT 1: 73877-77377 bp Neighborhood of RT #1 [73877, 77388] HEAT CpeS RVT_N RVT-GII RVT-GII GIIM CpeS cyt_b559_alpha Feature: gene Location: 73877-74542 bp Feature: domain Description: HEAT Location: 73889-74525 bp Feature: domain Description: HEAT Location: 73 889-74525 bp Feature: gene Location: 74659-74925 bp Feature: domain Description: CpeS Location: 74665-74893 bp Feature: domain Description: CpeS Location: 74665-74893 bp Feature: gene Location: 75448-76569 bp Feature: RT Description: RVT_N Location: 75484-75655 bp Feature: RT Description: RVT_N Location: 75484-75655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75676-75943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75676-75943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76024-76189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76024-76189 bp Feature: domain Description: GIIM Note: maturase Location: 76249-76444 bp Feature: domain Description: GIIM Note: maturase Location: 76249-76444 bp Feature: gene Location: 76651-76986 bp Feature: domain Description: CpeS Location: 76657-76933 bp Feature: domain Description: CpeS Location: 76657-7693 3 bp Feature: gene Location: 77140-77388 bp Feature: domain Description: cyt_b559_alpha Location: 77146-77377 bp Feature: domain Description: cyt_b559_alpha Location: 77146-773 77 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEAT (sd00044), CpeS (pfam09367), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), cyt_b559_alpha (TIGR01332)

Seq: NBYN01000064.1 Cylindrospermopsis raciborskii CENA303 NODE_118_length_59655_cov_347.245, whole genome shotgun sequence (59655 bp)
Overview 1 RT 1: 36206-41466 bp Neighborhood of RT #1 [36206, 41498] DppC KOG0404 TRX_NTR RVT_N RVT-GII GIIM KOG0404 N_methyl Pilin_GH Feature: gene Location: 36206-37066 bp Feature: domain Description: DppC Location: 36242-37058 bp Feature: domain Description: DppC Location: 3624 2-37058 bp Feature: gene Location: 37122-38276 bp Feature: domain Description: KOG0404 Location: 37125-37854 bp Feature: domain Description: KOG04 04 Location: 37125-37854 bp Feature: domain Description: TRX_NTR Location: 37977-38262 bp Feature: domain Description: TRX_NTR Location: 37977-38262 bp Feature: gene Location: 38464-39936 bp Feature: RT Description: RVT_N Location: 38548-38731 bp Feature: RT Description: RVT_N Location: 3854 8-38731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38806-39436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38806-394 36 bp Feature: domain Description: GIIM Note: maturase Location: 39565-39793 bp Feature: domain Description: GIIM Note: maturase Location: 39565-39793 bp Feature: gene Location: 40572-40760 bp Feature: domain Description: KOG0404 Location: 40602-40749 bp Feature: domain Description: KOG04 04 Location: 4 0602-4 074 9 bp Feature: gene Location: 40974-41498 bp Feature: domain Description: N_methyl Location: 41034-41103 bp Feature: domain Description: N_methyl Location: 4 1034 -4 1103 bp Feature: domain Description: Pilin_GH Location: 41139-41466 bp Feature: domain Description: Pilin_GH Location: 4 1139-4 14 66 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DppC (COG1173), KOG0404 (KOG0404, Thioredoxin reductase ), TRX_NTR (cd02949), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), N_methyl (pfam07963), Pilin_GH (pfam16734)