myRT

myRT report for GCA_002115415.1_ASM211541v1

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Seq: NBVO01000115.1 Enterococcus faecium strain VREfm 320/07 Contig_134_2, whole genome shotgun sequence (3377 bp)
Overview 1 RT 1: 109-2647 bp Neighborhood of RT #1 [109, 3309] HsdM RVT-AbiP2 Feature: gene Location: 109-1584 bp Ori: OSP56950.1 Feature: domain Description: HsdM Location: 130-1552 bp Feature: domain Description: HsdM Location: 1 30-1 552 bp Feature: gene Location: 1921-3309 bp Ori: OSP56951.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2182-2647 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 21 82-2647 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2

Seq: NBVO01000001.1 Enterococcus faecium strain VREfm 320/07 Contig_2_45, whole genome shotgun sequence (155848 bp)
Overview 1 RT 1: 91386-96350 bp Neighborhood of RT #1 [91386, 96942] RelB_DinJ RVT-GII HNHc Dcm Feature: gene Location: 91386-91727 bp Ori: OSP59625.1 Feature: domain Description: RelB_DinJ Location: 91617-91719 bp Feature: domain Description: RelB_DinJ Location: 91617-91719 bp Feature: gene Location: 91796-92810 bp Feature: gene Location: 93404-95278 bp Ori: OSP59569.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93770-94466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93770-94466 bp Feature: domain Description: HNHc Note: nucleases Location: 95006-95165 bp Feature: domain Description: HNHc Note: nucleases Location: 95006-95165 bp Feature: gene Location: 95380-95756 bp Feature: gene Location: 95801-96942 bp Feature: domain Description: Dcm Location: 95804-96350 bp Feature: domain Description: Dcm Location: 95804-96350 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB_DinJ (TIGR02384), RVT-GII, HNHc (smart00507), Dcm (COG0270)

Seq: NBVO01000015.1 Enterococcus faecium strain VREfm 320/07 Contig_20_19, whole genome shotgun sequence (62458 bp)
Overview 1 RT 1: 24399-29728 bp Neighborhood of RT #1 [24399, 29799] AAA_10 RVT-GII AAA_10 TcpE Feature: gene Location: 24399-25217 bp Ori: OSP58677.1 Feature: domain Description: AAA_10 Location: 24402-25203 bp Feature: domain Description: AAA_10 Location: 24402-25203 bp Feature: gene Location: 25245-25328 bp Feature: gene Location: 25351-27176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25651-26350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25651-263 50 bp Feature: gene Location: 27873-29423 bp Ori: OSP58678.1 Feature: domain Description: AAA_10 Location: 29202-29385 bp Feature: domain Description: AAA_10 Location: 29202-293 85 bp Feature: gene Location: 29410-29799 bp Ori: OSP58679.1 Feature: domain Description: TcpE Location: 29428-29728 bp Feature: domain Description: TcpE Location: 29428-29728 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_10 (pfam12846), RVT-GII, TcpE (pfam12648)