myRT

myRT report for GCA_002120075.1_ASM212007v1

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Seq: MSZN01000011.1 Alcaligenes faecalis strain GZAF1 Contig_11, whole genome shotgun sequence (151116 bp)
Overview 1 RT 1: 49314-53586 bp Neighborhood of RT #1 [49314, 53678] INT_Rci_Hp1_C RVT-Retrons HTH_XRE PulD Feature: gene Location: 49314-49517 bp Feature: gene Location: 49641-49877 bp Feature: domain Description: INT_Rci_Hp1_C Location: 49647-49773 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 49647-49773 bp Feature: gene Location: 50149-51171 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50335-50899 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50335-50899 bp Feature: gene Location: 51189-51476 bp Feature: domain Description: HTH_XRE Location: 51201-51366 bp Feature: domain Description: HTH_XRE Location: 51 201 -51 366 bp Feature: gene Location: 52431-53678 bp Feature: domain Description: PulD Location: 52920-53586 bp Feature: domain Description: PulD Location: 52920-53586 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Rci_Hp1_C (cd00796), RVT-Retrons, HTH_XRE (smart00530), PulD (COG1450)

Seq: MSZN01000014.1 Alcaligenes faecalis strain GZAF1 Contig_14, whole genome shotgun sequence (124492 bp)
Overview 1 RT 1: 17333-20408 bp Neighborhood of RT #1 [17333, 20410] Aminoglyc_resit RVT-GII GIIM PRK15417 Feature: gene Location: 17333-17604 bp Feature: gene Location: 17552-18085 bp Feature: domain Description: Aminoglyc_resit Location: 17555-18074 bp Feature: domain Description: Aminoglyc_resit Location: 17555-18074 bp Feature: gene Location: 18157-19062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18163-18628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18163-1862 8 bp Feature: domain Description: GIIM Note: maturase Location: 18673-18895 bp Feature: domain Description: GIIM Note: maturase Location: 18673-18895 bp Feature: gene Location: 19259-19438 bp Feature: gene Location: 19397-20410 bp Feature: domain Description: PRK15417 Location: 19400-20408 bp Feature: domain Description: PRK15417 Location: 19400-2 0408 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Aminoglyc_resit (pfam10706), RVT-GII, GIIM (pfam08388), PRK15417 (integron integrase)