myRT

myRT report for GCA_002124315.1_ASM212431v1

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Seq: NDTA01000019.1 Staphylococcus aureus strain CFSA087 NODE_19_length_25678_cov_259.056091, whole genome shotgun sequence (25678 bp)
Overview 1 RT 1: 98-7705 bp Neighborhood of RT #1 [98, 7731] RVT-AbiK RVT-AbiK PenP MecR1 Transpeptidase Feature: gene Location: 98-262 bp Feature: gene Location: 1752-2360 bp Feature: gene Location: 2900-3490 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 3374-3473 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 3374-3473 bp Feature: gene Location: 3577-4668 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 3580-3760 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 3580-3760 bp Feature: gene Location: 5022-5867 bp Feature: domain Description: PenP Location: 5028-5859 bp Feature: domain Description: PenP Location: 5028-5859 bp Feature: gene Location: 5932-7731 bp Feature: domain Description: MecR1 Location: 5974-7006 bp Feature: domain Description: MecR1 Location: 5974-7006 bp Feature: domain Description: Transpeptidase Location: 7060-7705 bp Feature: domain Description: Transpeptidase Location: 7060-7705 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiK, PenP (COG2367), MecR1 (COG4219), Transpeptidase (pfam00905)

Seq: NDTA01000035.1 Staphylococcus aureus strain CFSA087 NODE_40_length_324886_cov_119.464294, whole genome shotgun sequence (324886 bp)
Overview 1 RT 1: 43982-49433 bp Neighborhood of RT #1 [43982, 49433] PRK08617 RVT-Retrons Feature: gene Location: 43982-45646 bp Feature: domain Description: PRK08617 Location: 43991-45638 bp Feature: domain Description: PRK08617 Location: 43991-45638 bp Feature: gene Location: 45944-46168 bp Feature: gene Location: 46896-47912 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47046-47583 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47046-47583 bp Feature: gene Location: 48157-48786 bp Feature: gene Location: 48786-49433 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08617 (acetolactate synthase AlsS), RVT-Retrons