myRT

myRT report for GCA_002125925.1_ASM212592v1

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Seq: CP017980.1 Escherichia coli strain CH611_eco genome (4771582 bp)
Overview 1 RT 1: 54400-57985 bp 2 RT 2: 2114973-2118746 bp 3 RT 3: 3999368-4004254 bp Neighborhood of RT #1 [54400, 57985] Phage_holin_8 PHA02517 RVT-GII GIIM Neighborhood of RT #2 [2114973, 2118748] dinD PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #3 [3999368, 4004262] PHA02517 RVT-GII GIIM PHA02517 HsdM Feature: gene Location: 54400-54795 bp Feature: domain Description: Phage_holin_8 Location: 54403-54772 bp Feature: domain Description: Phage_holin_8 Location: 54403-54772 bp Feature: gene Location: 55234-55620 bp Feature: domain Description: PHA02517 Location: 55237-55618 bp Feature: domain Description: PHA0251 7 Location: 55237-5561 8 bp Feature: gene Location: 55797-57305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56055-56787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56055-56787 bp Feature: domain Description: GIIM Note: maturase Location: 56862-57060 bp Feature: domain Description: GIIM Note: maturase Location: 56862-57060 bp Feature: gene Location: 57274-57699 bp Feature: gene Location: 57614-57985 bp Feature: gene Location: 2114973-2115281 bp Feature: domain Description: dinD Location: 2115030-2115279 bp Feature: domain Description: dinD Location: 21 1 5030-21 1 5279 bp Feature: gene Location: 2115265-2115744 bp Feature: domain Description: PHA02517 Location: 2115268-2115742 bp Feature: domain Description: PHA0251 7 Location: 21 1 5268-21 1 5742 bp Feature: gene Location: 2115828-2117336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2116086-2116818 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 1 6086-21 1 681 8 bp Feature: domain Description: GIIM Note: maturase Location: 2116893-2117091 bp Feature: domain Description: GIIM Note: maturase Location: 21 1 6893-21 1 7091 bp Feature: gene Location: 2117943-2118224 bp Feature: domain Description: PHA02517 Location: 2117946-2118159 bp Feature: domain Description: PHA0251 7 Location: 21 1 7946-21 1 81 59 bp Feature: gene Location: 2118422-2118748 bp Feature: domain Description: InsE Location: 2118425-2118746 bp Feature: domain Description: InsE Location: 21 1 8425-21 1 8746 bp Feature: gene Location: 3999368-3999535 bp Feature: gene Location: 3999560-3999703 bp Feature: domain Description: PHA02517 Location: 3999569-3999638 bp Feature: domain Description: PHA0251 7 Location: 3999569-3999638 bp Feature: gene Location: 4000310-4001818 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4000568-4001300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4000568-4001 300 bp Feature: domain Description: GIIM Note: maturase Location: 4001375-4001573 bp Feature: domain Description: GIIM Note: maturase Location: 4001 375-4001 573 bp Feature: gene Location: 4001899-4002387 bp Feature: domain Description: PHA02517 Location: 4001902-4002352 bp Feature: domain Description: PHA0251 7 Location: 4001 902-4002352 bp Feature: gene Location: 4002739-4004262 bp Feature: domain Description: HsdM Location: 4002760-4004254 bp Feature: domain Description: HsdM Location: 4002760-4004254 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_holin_8 (pfam16931), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), dinD (PRK11525), InsE (COG2963), HsdM (COG0286)