myRT

myRT report for GCA_002126925.1_ASM212692v1

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Seq: NDVW01000018.1 Staphylococcus aureus strain c58 NODE_19_length_12650_cov_99.253227, whole genome shotgun sequence (12650 bp)
Overview 1 RT 1: 3-6318 bp Neighborhood of RT #1 [3, 6344] RVT-AbiK RVT-AbiK PenP MecR1 Transpeptidase Feature: gene Location: 3-284 bp Feature: gene Location: 364-972 bp Feature: gene Location: 1513-2103 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 1987-2086 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 1 987-2086 bp Feature: gene Location: 2190-3281 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 2193-2373 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 21 93-2373 bp Feature: gene Location: 3635-4480 bp Feature: domain Description: PenP Location: 3641-4472 bp Feature: domain Description: PenP Location: 3641 -4472 bp Feature: gene Location: 4545-6344 bp Feature: domain Description: MecR1 Location: 4587-5619 bp Feature: domain Description: MecR1 Location: 4587-561 9 bp Feature: domain Description: Transpeptidase Location: 5673-6318 bp Feature: domain Description: Transpeptidase Location: 5673-631 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiK, PenP (COG2367), MecR1 (COG4219), Transpeptidase (pfam00905)

Seq: NDVW01000003.1 Staphylococcus aureus strain c58 NODE_3_length_49289_cov_51.606220, whole genome shotgun sequence (49289 bp)
Overview 1 RT 1: 45954-49286 bp Neighborhood of RT #1 [45954, 49286] YkfC RVT-Retrons Feature: gene Location: 45954-46178 bp Feature: gene Location: 46906-47244 bp Feature: domain Description: YkfC Location: 46909-47209 bp Feature: domain Description: YkfC Location: 46909-472 09 bp Feature: gene Location: 47367-47921 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47517-47913 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47517-47913 bp Feature: gene Location: 48165-49286 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YkfC (COG3344), RVT-Retrons