myRT

myRT report for GCA_002127535.1_ASM212753v1

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Seq: MUBJ01000098.1 Xenorhabdus vietnamensis strain DSM 22392 Xvie_98, whole genome shotgun sequence (958 bp)
Overview 1 RT 1: 36-777 bp Neighborhood of RT #1 [36, 851] RVT-GII GIIM Feature: gene Location: 36-851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42-489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42-489 bp Feature: domain Description: GIIM Note: maturase Location: 594-777 bp Feature: domain Description: GIIM Note: maturase Location: 594-777 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MUBJ01000053.1 Xenorhabdus vietnamensis strain DSM 22392 Xvie_53, whole genome shotgun sequence (4739 bp)
Overview 1 RT 1: 119-2485 bp Neighborhood of RT #1 [119, 2568] RVT-GII Rve Feature: gene Location: 119-364 bp Feature: gene Location: 361-1536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 646-1333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 646-1333 bp Feature: gene Location: 1839-2258 bp Feature: gene Location: 2182-2568 bp Feature: domain Description: Rve Location: 2353-2485 bp Feature: domain Description: Rve Location: 2 353-2 485 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), RVT-GII

Seq: MUBJ01000039.1 Xenorhabdus vietnamensis strain DSM 22392 Xvie_39, whole genome shotgun sequence (12525 bp)
Overview 1 RT 1: 6072-12437 bp Neighborhood of RT #1 [6072, 12460] RHS_repeat YD_repeat_2x RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat Rhs_assc_core Tox-HDC group_II_RT_mat RVT-GII Rve Feature: gene Location: 6072-11051 bp Feature: domain Description: RHS_repeat Location: 7791-7887 bp Feature: domain Description: RHS_repeat Location: 7791-7887 bp Feature: domain Description: YD_repeat_2x Location: 7935-8040 bp Feature: domain Description: YD_repeat_2x Location: 793 5-8040 bp Feature: domain Description: RHS_repeat Location: 8400-8508 bp Feature: domain Description: RHS_repeat Location: 8400-8508 bp Feature: domain Description: RHS_repeat Location: 8625-8730 bp Feature: domain Description: RHS_repeat Location: 8625-873 0 bp Feature: domain Description: RHS_repeat Location: 8982-9048 bp Feature: domain Description: RHS_repeat Location: 8982-9048 bp Feature: domain Description: RHS_repeat Location: 9060-9120 bp Feature: domain Description: RHS_repeat Location: 9060-9120 bp Feature: domain Description: RHS_repeat Location: 9237-9330 bp Feature: domain Description: RHS_repeat Location: 923 7-93 3 0 bp Feature: domain Description: RHS_repeat Location: 9390-9447 bp Feature: domain Description: RHS_repeat Location: 93 90-9447 bp Feature: domain Description: RHS_repeat Location: 9498-9594 bp Feature: domain Description: RHS_repeat Location: 9498-9594 bp Feature: domain Description: RHS_repeat Location: 9606-9693 bp Feature: domain Description: RHS_repeat Location: 9606-9693 bp Feature: domain Description: Rhs_assc_core Location: 9945-10146 bp Feature: domain Description: Rhs_assc_core Location: 9945-10146 bp Feature: domain Description: Tox-HDC Location: 10551-10992 bp Feature: domain Description: Tox-HDC Location: 10551-10992 bp Feature: gene Location: 11182-11676 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 11188-11545 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 11188-11545 bp Feature: gene Location: 11673-11933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11688-11910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11688-11910 bp Feature: gene Location: 11959-12264 bp Feature: gene Location: 12218-12460 bp Feature: domain Description: Rve Location: 12221-12437 bp Feature: domain Description: Rve Location: 12221-1243 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, Rve (COG3316), RHS_repeat (pfam05593), YD_repeat_2x (TIGR01643), Rhs_assc_core (TIGR03696), Tox-HDC (pfam15656)

Seq: MUBJ01000026.1 Xenorhabdus vietnamensis strain DSM 22392 Xvie_26, whole genome shotgun sequence (46961 bp)
Overview 1 RT 1: 41091-46555 bp Neighborhood of RT #1 [41091, 46773] SIR2-like STALD DUF1863 RVT-GII GIIM DDE_Tnp_1_2 DUF4096 Feature: gene Location: 41091-42542 bp Feature: domain Description: SIR2-like Location: 41163-41796 bp Feature: domain Description: SIR2-like Location: 4 1163-4 1796 bp Feature: domain Description: STALD Location: 41847-42465 bp Feature: domain Description: STALD Location: 4 184 7-4 24 65 bp Feature: gene Location: 42542-43132 bp Feature: domain Description: DUF1863 Location: 42551-42899 bp Feature: domain Description: DUF1863 Location: 4 2551-4 2899 bp Feature: gene Location: 43861-45195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44146-44833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 4 14 6-4 4 833 bp Feature: domain Description: GIIM Note: maturase Location: 44968-45121 bp Feature: domain Description: GIIM Note: maturase Location: 4 4 968-4 5121 bp Feature: gene Location: 45932-46237 bp Feature: domain Description: DDE_Tnp_1_2 Location: 45956-46214 bp Feature: domain Description: DDE_Tnp_1_2 Location: 4 5956-4 6214 bp Feature: gene Location: 46315-46773 bp Feature: domain Description: DUF4096 Location: 46336-46555 bp Feature: domain Description: DUF4 096 Location: 4 6336-4 6555 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SIR2-like (cd01406), STALD (pfam18185), DUF1863 (pfam08937), RVT-GII, GIIM (pfam08388), DDE_Tnp_1_2 (pfam13586), DUF4096 (pfam13340)

Seq: MUBJ01000073.1 Xenorhabdus vietnamensis strain DSM 22392 Xvie_73, whole genome shotgun sequence (1893 bp)
Overview 1 RT 1: 84-1316 bp Neighborhood of RT #1 [84, 1402] RVT-GII GIIM RVT-GII Feature: gene Location: 84-698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90-309 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90-309 bp Feature: domain Description: GIIM Note: maturase Location: 393-606 bp Feature: domain Description: GIIM Note: maturase Location: 393-606 bp Feature: gene Location: 674-1402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 950-1316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95 0-1316 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)