myRT

myRT report for GCA_002127545.1_ASM212754v1

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Seq: MUBK01000021.1 Xenorhabdus beddingii strain DSM 4764 Xbed_21, whole genome shotgun sequence (89193 bp)
Overview 1 RT 1: 85123-89042 bp Neighborhood of RT #1 [85123, 89042] TonB DDE_Tnp_1_3 RVT-GII GIIM DDE_Tnp_1_3 Feature: gene Location: 85123-85935 bp Feature: domain Description: TonB Location: 85204-85924 bp Feature: domain Description: TonB Location: 85204-85924 bp Feature: gene Location: 86169-86726 bp Feature: domain Description: DDE_Tnp_1_3 Location: 86484-86703 bp Feature: domain Description: DDE_Tnp_1 _3 Location: 86484-86703 bp Feature: gene Location: 87249-88568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87525-88179 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87525-881 79 bp Feature: domain Description: GIIM Note: maturase Location: 88263-88476 bp Feature: domain Description: GIIM Note: maturase Location: 88263-88476 bp Feature: gene Location: 88555-88815 bp Feature: domain Description: DDE_Tnp_1_3 Location: 88648-88702 bp Feature: domain Description: DDE_Tnp_1 _3 Location: 88648-88702 bp Feature: gene Location: 88887-89042 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TonB (COG0810), DDE_Tnp_1_3 (pfam13612), RVT-GII, GIIM (pfam08388)

Seq: MUBK01000032.1 Xenorhabdus beddingii strain DSM 4764 Xbed_32, whole genome shotgun sequence (31558 bp)
Overview 1 RT 1: 7446-13132 bp Neighborhood of RT #1 [7446, 13137] groES groEL RVT_N RVT-GII GIIM HNHc DUF4156 Feature: gene Location: 7446-7739 bp Feature: domain Description: groES Location: 7449-7734 bp Feature: domain Description: groES Location: 7449-7734 bp Feature: gene Location: 7795-9441 bp Feature: domain Description: groEL Location: 7801-9424 bp Feature: domain Description: groEL Location: 7801-942 4 bp Feature: gene Location: 10457-12121 bp Feature: RT Description: RVT_N Location: 10508-10751 bp Feature: RT Description: RVT_N Location: 10508-10751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10796-11441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10796-11441 bp Feature: domain Description: GIIM Note: maturase Location: 11495-11726 bp Feature: domain Description: GIIM Note: maturase Location: 11495-1172 6 bp Feature: domain Description: HNHc Note: nucleases Location: 11942-12098 bp Feature: domain Description: HNHc Note: nucleases Location: 11942 -12 098 bp Feature: gene Location: 12223-12543 bp Feature: gene Location: 12796-13137 bp Feature: domain Description: DUF4156 Location: 12862-13132 bp Feature: domain Description: DUF4156 Location: 12 862 -13132 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF4156 (pfam13698), groES (PRK14533), groEL (PRK12852)