myRT

myRT report for GCA_002128685.1_ASM212868v1

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Seq: MIMU01000116.1 Lactobacillus reuteri strain KLR3005 NODE_49_length_15909_cov_6.52024_ID_12649, whole genome shotgun sequence (15909 bp)
Overview 1 RT 1: 1-6719 bp Neighborhood of RT #1 [1, 6730] RVT-GII GIIM KxYKxGKxW glucan_65_rpt glucan_65_rpt glucan_65_rpt GanB Surf_Exclu_PgrA glucan_65_rpt COG5263 Feature: gene Location: 1-630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-1 84 bp Feature: domain Description: GIIM Note: maturase Location: 238-466 bp Feature: domain Description: GIIM Note: maturase Location: 238-466 bp Feature: gene Location: 730-4986 bp Feature: domain Description: KxYKxGKxW Location: 742-805 bp Feature: domain Description: KxYKxGKxW Location: 742-805 bp Feature: domain Description: glucan_65_rpt Location: 1402-1564 bp Feature: domain Description: glucan_65_rpt Location: 1 402-1 564 bp Feature: domain Description: glucan_65_rpt Location: 1660-1819 bp Feature: domain Description: glucan_65_rpt Location: 1 660-1 81 9 bp Feature: domain Description: glucan_65_rpt Location: 2056-2203 bp Feature: domain Description: glucan_65_rpt Location: 2056-2203 bp Feature: domain Description: GanB Location: 3310-4534 bp Feature: domain Description: GanB Location: 331 0-4534 bp Feature: gene Location: 5150-6730 bp Feature: domain Description: Surf_Exclu_PgrA Location: 5330-6137 bp Feature: domain Description: Surf_Exclu_PgrA Location: 5330-61 37 bp Feature: domain Description: glucan_65_rpt Location: 6311-6383 bp Feature: domain Description: glucan_65_rpt Location: 631 1 -6383 bp Feature: domain Description: COG5263 Location: 6404-6719 bp Feature: domain Description: COG5263 Location: 6404-671 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MIMU01000001.1 Lactobacillus reuteri strain KLR3005 NODE_100_length_2874_cov_7.69845_ID_12751, whole genome shotgun sequence (2874 bp)
Overview 1 RT 1: 1-2873 bp Neighborhood of RT #1 [1, 2874] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII Feature: gene Location: 1-312 bp Feature: domain Description: TnpB_IS66 Location: 4-265 bp Feature: domain Description: TnpB_IS66 Location: 4-2 65 bp Feature: gene Location: 384-1925 bp Feature: domain Description: LZ_Tnp_IS66 Location: 459-699 bp Feature: domain Description: LZ_Tnp_IS66 Location: 459-699 bp Feature: domain Description: zf-IS66 Location: 726-855 bp Feature: domain Description: zf-IS66 Location: 72 6-855 bp Feature: domain Description: DDE_Tnp_IS66 Location: 915-1764 bp Feature: domain Description: DDE_Tnp_IS66 Location: 915-1764 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1782-1893 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1782 -1893 bp Feature: gene Location: 2414-2874 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2732-2873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 732 -2 873 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)

Seq: MIMU01000060.1 Lactobacillus reuteri strain KLR3005 NODE_154_length_797_cov_7.48291_ID_12865, whole genome shotgun sequence (797 bp)
Overview 1 RT 1: 86-605 bp Neighborhood of RT #1 [86, 769] RVT-GII GIIM Feature: gene Location: 86-769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89-323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89-3 23 bp Feature: domain Description: GIIM Note: maturase Location: 377-605 bp Feature: domain Description: GIIM Note: maturase Location: 3 77-605 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)