myRT

myRT report for GCA_002133405.1_ASM213340v1

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Seq: NELV01000081.1 Escherichia coli strain EC-H contig_81_19_31, whole genome shotgun sequence (7254 bp)
Overview 1 RT 1: 2413-4752 bp Neighborhood of RT #1 [2413, 5672] HTH_XRE RVT-Retrons PRK13889 Feature: gene Location: 2413-2628 bp Feature: gene Location: 2719-3000 bp Feature: domain Description: HTH_XRE Location: 2734-2899 bp Feature: domain Description: HTH_XRE Location: 2734-2899 bp Feature: gene Location: 2993-4093 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3134-3686 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31 34-3686 bp Feature: gene Location: 4170-5672 bp Feature: domain Description: PRK13889 Location: 4173-4752 bp Feature: domain Description: PRK1 3889 Location: 41 73-4752 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, PRK13889 (conjugal transfer relaxase TraA; Provisional)

Seq: NELV01000111.1 Escherichia coli strain EC-H contig_111_38_09, whole genome shotgun sequence (38124 bp)
Overview 1 RT 1: 18637-22752 bp Neighborhood of RT #1 [18637, 22752] InsG RVT-GII GIIM Feature: gene Location: 18637-18816 bp Feature: gene Location: 19215-20204 bp Feature: domain Description: InsG Location: 19218-20139 bp Feature: domain Description: InsG Location: 192 18-2 0139 bp Feature: gene Location: 20591-21979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20921-21539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 092 1-2 1539 bp Feature: domain Description: GIIM Note: maturase Location: 21587-21818 bp Feature: domain Description: GIIM Note: maturase Location: 2 1587-2 1818 bp Feature: gene Location: 22204-22477 bp Feature: gene Location: 22547-22752 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsG (COG3385), RVT-GII, GIIM (pfam08388)

Seq: NELV01000087.1 Escherichia coli strain EC-H contig_87_45_56, whole genome shotgun sequence (8589 bp)
Overview 1 RT 1: 5659-8589 bp Neighborhood of RT #1 [5659, 8589] PHA02517 RVT-GII Feature: gene Location: 5659-5838 bp Feature: domain Description: PHA02517 Location: 5662-5839 bp Feature: domain Description: PHA02517 Location: 5662-583 9 bp Feature: gene Location: 5921-6232 bp Feature: gene Location: 6239-7426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6497-7229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6497-7229 bp Feature: gene Location: 7787-8077 bp Feature: gene Location: 8079-8589 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII