myRT

myRT report for GCA_002133425.1_ASM213342v1

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Seq: NEMK01000025.1 Escherichia coli strain OLC999 D3509_Cont0025, whole genome shotgun sequence (75199 bp)
Overview 1 RT 1: 59716-62974 bp Neighborhood of RT #1 [59716, 62974] COG4643 RVT-Retrons Feature: gene Location: 59716-60042 bp Feature: domain Description: COG4643 Location: 59728-60022 bp Feature: domain Description: COG4643 Location: 59728-60022 bp Feature: gene Location: 60228-60437 bp Feature: gene Location: 60786-61721 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 60897-61482 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 60897-61 482 bp Feature: gene Location: 61721-62683 bp Feature: gene Location: 62747-62974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4643 (Uncharacterized domain associated with phage/plasmid primase ), RVT-Retrons

Seq: NEMK01000001.1 Escherichia coli strain OLC999 D3509_Cont0001, whole genome shotgun sequence (371585 bp)
Overview 1 RT 1: 302398-306099 bp Neighborhood of RT #1 [302398, 306101] InsQ InsQ RVT-GII GIIM PRK09951 PRK11018 Feature: gene Location: 302398-303216 bp Feature: domain Description: InsQ Location: 302413-302839 bp Feature: domain Description: InsQ Location: 302 413-302 839 bp Feature: domain Description: InsQ Location: 302839-303130 bp Feature: domain Description: InsQ Location: 302 839-303130 bp Feature: gene Location: 303257-303584 bp Feature: gene Location: 303633-305003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 303969-304581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 303969-304581 bp Feature: domain Description: GIIM Note: maturase Location: 304641-304845 bp Feature: domain Description: GIIM Note: maturase Location: 304641-304845 bp Feature: gene Location: 305088-305759 bp Feature: domain Description: PRK09951 Location: 305091-305754 bp Feature: domain Description: PRK09951 Location: 305091-305754 bp Feature: gene Location: 305868-306101 bp Feature: domain Description: PRK11018 Location: 305871-306099 bp Feature: domain Description: PRK11018 Location: 305871-306099 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT-GII, GIIM (pfam08388), PRK09951 (hypothetical protein; Provisional), PRK11018 (putative sulfurtransferase YedF)

Seq: NEMK01000064.1 Escherichia coli strain OLC999 D3509_Cont0064, whole genome shotgun sequence (2138 bp)
Overview 1 RT 1: 488-2137 bp Neighborhood of RT #1 [488, 2138] RVT-GII GIIM DDE_Tnp_1_assoc Feature: gene Location: 488-1810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 764-1421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 764-1421 bp Feature: domain Description: GIIM Note: maturase Location: 1511-1718 bp Feature: domain Description: GIIM Note: maturase Location: 1511-1718 bp Feature: gene Location: 2017-2138 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 2038-2137 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 203 8-213 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_assoc (pfam13808), RVT-GII, GIIM (pfam08388)