myRT

myRT report for GCA_002133525.1_ASM213352v1

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Seq: NEMV01000151.1 Escherichia coli strain OLC1066 CA_CFIA-1399_Cont0151, whole genome shotgun sequence (3420 bp)
Overview 1 RT 1: 2437-3204 bp Neighborhood of RT #1 [2437, 3281] DDE_Tnp_IS66_C RVT-GII GIIM Feature: gene Location: 2437-2553 bp Feature: gene Location: 2531-2620 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2543-2618 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2543-261 8 bp Feature: gene Location: 2724-3281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2736-2904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2736-2904 bp Feature: domain Description: GIIM Note: maturase Location: 2988-3204 bp Feature: domain Description: GIIM Note: maturase Location: 2988-3204 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388)

Seq: NEMV01000126.1 Escherichia coli strain OLC1066 CA_CFIA-1399_Cont0126, whole genome shotgun sequence (6563 bp)
Overview 1 RT 1: 119-2765 bp Neighborhood of RT #1 [119, 2776] DDE_Tnp_IS66 RVT-GII GIIM DDE_Tnp_IS66_C COG3547 Feature: gene Location: 119-298 bp Feature: domain Description: DDE_Tnp_IS66 Location: 125-281 bp Feature: domain Description: DDE_Tnp_IS66 Location: 12 5-2 81 bp Feature: gene Location: 355-774 bp Feature: gene Location: 824-2002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 971-1625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 971-162 5 bp Feature: domain Description: GIIM Note: maturase Location: 1703-1925 bp Feature: domain Description: GIIM Note: maturase Location: 1703-192 5 bp Feature: gene Location: 2073-2264 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2130-2241 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2 130-2 2 41 bp Feature: gene Location: 2294-2776 bp Feature: domain Description: COG3547 Location: 2312-2765 bp Feature: domain Description: COG3547 Location: 2 312 -2 765 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: NEMV01000164.1 Escherichia coli strain OLC1066 CA_CFIA-1399_Cont0164, whole genome shotgun sequence (2468 bp)
Overview 1 RT 1: 925-2468 bp Neighborhood of RT #1 [925, 2468] PHA02517 RVT-GII Feature: gene Location: 925-1134 bp Feature: domain Description: PHA02517 Location: 1018-1090 bp Feature: domain Description: PHA02517 Location: 1018-1090 bp Feature: gene Location: 1079-1321 bp Feature: gene Location: 1281-1520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1287-1494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1287-1494 bp Feature: gene Location: 1614-1792 bp Feature: gene Location: 2240-2468 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PHA02517 (putative transposase OrfB; Reviewed)

Seq: NEMV01000117.1 Escherichia coli strain OLC1066 CA_CFIA-1399_Cont0117, whole genome shotgun sequence (8256 bp)
Overview 1 RT 1: 646-7680 bp Neighborhood of RT #1 [646, 7680] Peptidase_S6 autotrans_barl PHA02517 RVT-GII GIIM Feature: gene Location: 646-4764 bp Feature: domain Description: Peptidase_S6 Location: 799-2971 bp Feature: domain Description: Peptidase_S6 Location: 799-2971 bp Feature: domain Description: autotrans_barl Location: 3535-4762 bp Feature: domain Description: autotrans_barl Location: 3535-4 762 bp Feature: gene Location: 4929-5408 bp Feature: domain Description: PHA02517 Location: 4932-5406 bp Feature: domain Description: PHA02517 Location: 4 932-54 06 bp Feature: gene Location: 5492-7015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5765-6497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5765-64 97 bp Feature: domain Description: GIIM Note: maturase Location: 6572-6770 bp Feature: domain Description: GIIM Note: maturase Location: 6572-6770 bp Feature: gene Location: 6969-7394 bp Feature: gene Location: 7309-7680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Peptidase_S6 (pfam02395), autotrans_barl (TIGR01414)

Seq: NEMV01000175.1 Escherichia coli strain OLC1066 CA_CFIA-1399_Cont0175, whole genome shotgun sequence (2000 bp)
Overview 1 RT 1: 1-1657 bp Neighborhood of RT #1 [1, 1806] DDE_Tnp_1 RVT-GII HTH_23 InsE Feature: gene Location: 1-398 bp Feature: domain Description: DDE_Tnp_1 Location: 7-271 bp Feature: domain Description: DDE_Tnp_1 Location: 7-271 bp Feature: gene Location: 331-1044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 532-1018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 32-1018 bp Feature: gene Location: 1138-1806 bp Feature: domain Description: HTH_23 Location: 1246-1333 bp Feature: domain Description: HTH_23 Location: 1246-1333 bp Feature: domain Description: InsE Location: 1462-1657 bp Feature: domain Description: InsE Location: 1462-165 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_23 (pfam13384), InsE (COG2963), DDE_Tnp_1 (pfam01609), RVT-GII

Seq: NEMV01000171.1 Escherichia coli strain OLC1066 CA_CFIA-1399_Cont0171, whole genome shotgun sequence (2262 bp)
Overview 1 RT 1: 1-1659 bp Neighborhood of RT #1 [1, 2044] PRK09409 RVT-GII Feature: gene Location: 1-204 bp Feature: domain Description: PRK09409 Location: 4-202 bp Feature: domain Description: PRK09409 Location: 4-202 bp Feature: gene Location: 642-2044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1002-1659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1002-16 59 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09409 (IS2 transposase TnpB; Reviewed), RVT-GII

Seq: NEMV01000134.1 Escherichia coli strain OLC1066 CA_CFIA-1399_Cont0134, whole genome shotgun sequence (5699 bp)
Overview 1 RT 1: 3681-5584 bp Neighborhood of RT #1 [3681, 5682] RVT_N RVT-GII Feature: gene Location: 3681-3869 bp Feature: gene Location: 3870-4040 bp Feature: gene Location: 4663-5682 bp Feature: RT Description: RVT_N Location: 4711-4954 bp Feature: RT Description: RVT_N Location: 47 11-4954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4999-5584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4999-5584 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII