myRT

myRT report for GCA_002133905.1_ASM213390v1

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Seq: NEMI01000073.1 Escherichia coli strain OLC1003 D3648_Cont0073, whole genome shotgun sequence (14338 bp)
Overview 1 RT 1: 5152-13895 bp Neighborhood of RT #1 [5152, 13895] DUF4011 DEXXQc_SF1 SF1_C_Upf1 MTES_1575 PHA02517 RVT-GII GIIM Feature: gene Location: 5152-10887 bp Ori: OTB65781.1 Feature: domain Description: DUF4011 Location: 5242-6076 bp Feature: domain Description: DUF401 1 Location: 5242-6076 bp Feature: domain Description: DEXXQc_SF1 Location: 6433-9535 bp Feature: domain Description: DEXXQc_SF1 Location: 6433-9535 bp Feature: domain Description: SF1_C_Upf1 Location: 9544-10072 bp Feature: domain Description: SF1 _C_Upf1 Location: 9544-1 0072 bp Feature: domain Description: MTES_1575 Location: 10201-10492 bp Feature: domain Description: MTES_1 575 Location: 1 0201 -1 0492 bp Feature: gene Location: 11108-11566 bp Feature: domain Description: PHA02517 Location: 11111-11558 bp Feature: domain Description: PHA0251 7 Location: 1 1 1 1 1 -1 1 558 bp Feature: gene Location: 11647-13170 bp Ori: OTB65782.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11920-12652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 920-1 2652 bp Feature: domain Description: GIIM Note: maturase Location: 12727-12925 bp Feature: domain Description: GIIM Note: maturase Location: 1 2727-1 2925 bp Feature: gene Location: 13124-13549 bp Feature: gene Location: 13464-13895 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), SF1_C_Upf1 (cd18808), MTES_1575 (pfam18741), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: NEMI01000002.1 Escherichia coli strain OLC1003 D3648_Cont0002, whole genome shotgun sequence (273948 bp)
Overview 1 RT 1: 8248-12091 bp Neighborhood of RT #1 [8248, 12096] Peptidase_S74 RVT-UG17 SLATT_5 PRK10597 Feature: gene Location: 8248-9288 bp Ori: OTB73422.1 Feature: domain Description: Peptidase_S74 Location: 8929-9076 bp Feature: domain Description: Peptidase_S74 Location: 892 9-9076 bp Feature: gene Location: 9331-9618 bp Feature: gene Location: 9726-11096 bp Ori: OTB73423.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 9954-10560 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 9954-10560 bp Feature: gene Location: 11074-11625 bp Ori: OTB73424.1 Feature: domain Description: SLATT_5 Location: 11080-11596 bp Feature: domain Description: SLATT_5 Location: 11080-11596 bp Feature: gene Location: 11848-12096 bp Ori: OTB73425.1 Feature: domain Description: PRK10597 Location: 11851-12091 bp Feature: domain Description: PRK10597 Location: 11851-12 091 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_S74 (pfam13884), RVT-UG17, SLATT_5 (pfam18160), PRK10597 (DNA damage-inducible protein I; Provisional)