myRT

myRT report for GCA_002134215.1_ASM213421v1

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Seq: NEOL01000085.1 Escherichia coli strain OLC1269 D3730_Cont0085, whole genome shotgun sequence (7154 bp)
Overview 1 RT 1: 3760-6423 bp Neighborhood of RT #1 [3760, 6464] RVT-GII HigB-like_toxin antidote_HigA Feature: gene Location: 3760-3904 bp Feature: gene Location: 4105-4488 bp Feature: gene Location: 4485-5728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4689-5283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4689-5283 bp Feature: gene Location: 5893-6174 bp Feature: domain Description: HigB-like_toxin Location: 5902-6172 bp Feature: domain Description: HigB-like_toxin Location: 5902-61 72 bp Feature: gene Location: 6183-6464 bp Feature: domain Description: antidote_HigA Location: 6201-6423 bp Feature: domain Description: antidote_HigA Location: 6201 -6423 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HigB-like_toxin (pfam05015), antidote_HigA (TIGR02607)

Seq: NEOL01000054.1 Escherichia coli strain OLC1269 D3730_Cont0054, whole genome shotgun sequence (27130 bp)
Overview 1 RT 1: 11652-14910 bp Neighborhood of RT #1 [11652, 14910] COG4643 RVT-Retrons Feature: gene Location: 11652-11978 bp Feature: domain Description: COG4643 Location: 11664-11958 bp Feature: domain Description: COG4643 Location: 11664-11958 bp Feature: gene Location: 12164-12373 bp Feature: gene Location: 12722-13657 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12833-13418 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 833-13418 bp Feature: gene Location: 13657-14619 bp Feature: gene Location: 14683-14910 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4643 (Uncharacterized domain associated with phage/plasmid primase ), RVT-Retrons

Seq: NEOL01000128.1 Escherichia coli strain OLC1269 D3730_Cont0128, whole genome shotgun sequence (2084 bp)
Overview 1 RT 1: 275-1505 bp Neighborhood of RT #1 [275, 1597] RVT-GII GIIM Feature: gene Location: 275-1597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 551-1208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 551-1208 bp Feature: domain Description: GIIM Note: maturase Location: 1298-1505 bp Feature: domain Description: GIIM Note: maturase Location: 1298-1505 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NEOL01000032.1 Escherichia coli strain OLC1269 D3730_Cont0032, whole genome shotgun sequence (54583 bp)
Overview 1 RT 1: 50077-53694 bp Neighborhood of RT #1 [50077, 53780] PRK11018 PRK09951 RVT-GII GIIM InsQ InsQ Feature: gene Location: 50077-50310 bp Feature: domain Description: PRK11018 Location: 50080-50308 bp Feature: domain Description: PRK11018 Location: 50080-50308 bp Feature: gene Location: 50419-51090 bp Feature: domain Description: PRK09951 Location: 50422-51085 bp Feature: domain Description: PRK09951 Location: 504 22-51085 bp Feature: gene Location: 51175-52545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51511-52123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51511-52123 bp Feature: domain Description: GIIM Note: maturase Location: 52183-52387 bp Feature: domain Description: GIIM Note: maturase Location: 52183-52387 bp Feature: gene Location: 52594-52921 bp Feature: gene Location: 52962-53780 bp Feature: domain Description: InsQ Location: 52977-53403 bp Feature: domain Description: InsQ Location: 52977-534 03 bp Feature: domain Description: InsQ Location: 53403-53694 bp Feature: domain Description: InsQ Location: 534 03-53694 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11018 (putative sulfurtransferase YedF), PRK09951 (hypothetical protein; Provisional), RVT-GII, GIIM (pfam08388), InsQ (COG0675)