myRT

myRT report for GCA_002134325.1_ASM213432v1

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Seq: NEMR01000002.1 Escherichia coli strain OLC990 CA_CFIA-709_Cont0002, whole genome shotgun sequence (274171 bp)
Overview 1 RT 1: 8471-12314 bp Neighborhood of RT #1 [8471, 12319] Peptidase_S74 RVT-UG17 SLATT_5 PRK10597 Feature: gene Location: 8471-9511 bp Ori: OTC08747.1 Feature: domain Description: Peptidase_S74 Location: 9152-9299 bp Feature: domain Description: Peptidase_S74 Location: 91 52-9299 bp Feature: gene Location: 9554-9841 bp Feature: gene Location: 9949-11319 bp Ori: OTC08748.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 10177-10783 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 01 77-1 0783 bp Feature: gene Location: 11297-11848 bp Ori: OTC08749.1 Feature: domain Description: SLATT_5 Location: 11303-11819 bp Feature: domain Description: SLATT_5 Location: 1 1 303-1 1 81 9 bp Feature: gene Location: 12071-12319 bp Ori: OTC08750.1 Feature: domain Description: PRK10597 Location: 12074-12314 bp Feature: domain Description: PRK1 0597 Location: 1 2074-1 231 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_S74 (pfam13884), RVT-UG17, SLATT_5 (pfam18160), PRK10597 (DNA damage-inducible protein I; Provisional)

Seq: NEMR01000075.1 Escherichia coli strain OLC990 CA_CFIA-709_Cont0075, whole genome shotgun sequence (14436 bp)
Overview 1 RT 1: 542-8890 bp Neighborhood of RT #1 [542, 9285] RVT-GII GIIM PHA02517 DUF4011 DEXXQc_SF1 SF1_C_Upf1 MTES_1575 Feature: gene Location: 542-973 bp Feature: gene Location: 888-1313 bp Feature: gene Location: 1267-2790 bp Ori: OTB96970.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1540-2272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1540-2 2 72 bp Feature: domain Description: GIIM Note: maturase Location: 2347-2545 bp Feature: domain Description: GIIM Note: maturase Location: 2 347-2 545 bp Feature: gene Location: 2871-3329 bp Feature: domain Description: PHA02517 Location: 2874-3321 bp Feature: domain Description: PHA02 517 Location: 2 874-332 1 bp Feature: gene Location: 3550-9285 bp Ori: OTB96971.1 Feature: domain Description: DUF4011 Location: 3640-4474 bp Feature: domain Description: DUF4011 Location: 3640-4474 bp Feature: domain Description: DEXXQc_SF1 Location: 4831-7933 bp Feature: domain Description: DEXXQc_SF1 Location: 4831-7933 bp Feature: domain Description: SF1_C_Upf1 Location: 7942-8470 bp Feature: domain Description: SF1_C_Upf1 Location: 7942 -8470 bp Feature: domain Description: MTES_1575 Location: 8599-8890 bp Feature: domain Description: MTES_1575 Location: 8599-8890 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), SF1_C_Upf1 (cd18808), MTES_1575 (pfam18741)