myRT

myRT report for GCA_002135795.1_ASM213579v1

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Seq: NFFR01000010.1 Pseudomonas aeruginosa strain S669_C14_BS S669_C14_BS_NODE_10_length_239541, whole genome shotgun sequence (239541 bp)
Overview 1 RT 1: 84187-94484 bp Neighborhood of RT #1 [84187, 94495] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 Feature: gene Location: 84187-86040 bp Feature: domain Description: PRK05658 Location: 84199-86038 bp Feature: domain Description: PRK05658 Location: 841 99-86038 bp Feature: gene Location: 86147-89884 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 86255-86912 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 86255-8691 2 bp Feature: domain Description: PRK09776 Location: 87125-87596 bp Feature: domain Description: PRK09776 Location: 871 25-87596 bp Feature: domain Description: PAS Location: 87668-88178 bp Feature: domain Description: PAS Location: 87668-881 78 bp Feature: domain Description: PRK10060 Location: 88187-89834 bp Feature: domain Description: PRK1 0060 Location: 881 87-89834 bp Feature: gene Location: 90965-92650 bp Feature: RT Description: RVT_N Location: 91022-91262 bp Feature: RT Description: RVT_N Location: 91 022-91 262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91310-91946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 31 0-91 946 bp Feature: domain Description: GIIM Note: maturase Location: 92000-92231 bp Feature: domain Description: GIIM Note: maturase Location: 92000-92231 bp Feature: domain Description: HNH Note: nucleases Location: 92483-92621 bp Feature: domain Description: HNH Note: nucleases Location: 92483-92621 bp Feature: gene Location: 92978-93115 bp Feature: gene Location: 93374-94495 bp Feature: domain Description: COG3177 Location: 93392-94484 bp Feature: domain Description: COG31 77 Location: 93392-94484 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), COG3177 (Fic family protein )