myRT

myRT report for GCA_002136865.1_ASM213686v1

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Seq: NGCH01001594.1 Acinetobacter baumannii strain PR354 PR354_NODE_245.ctg_1, whole genome shotgun sequence (4227 bp)
Overview 1 RT 1: 1132-4174 bp Neighborhood of RT #1 [1132, 4174] YecA RVT-G2L Feature: gene Location: 1132-1629 bp Feature: gene Location: 1604-2452 bp Ori: OTK80320.1 Feature: domain Description: YecA Location: 2198-2351 bp Feature: domain Description: YecA Location: 21 98-2351 bp Feature: gene Location: 2507-3703 bp Ori: OTK80321.1 Feature: RT Description: RVT-G2L Note: G2L RT Location: 2732-3383 bp Feature: RT Description: RVT-G2L Note: G2L RT Location: 2732-3383 bp Feature: gene Location: 3758-4174 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YecA (COG3318), RVT-G2L

Seq: NGCH01001773.1 Acinetobacter baumannii strain PR354 PR354_NODE_26.ctg_1, whole genome shotgun sequence (15820 bp)
Overview 1 RT 1: 1827-6942 bp Neighborhood of RT #1 [1827, 6989] RMtype1_S_LlaAI06ORF1089P_TRD1-CR1_like RMtype1_S_Sau1132ORF3780P-TRD2-CR2_like HsdM RVT-Retrons HTH_XRE YafO_toxin Feature: gene Location: 1827-2801 bp Ori: OTK69374.1 Feature: domain Description: RMtype1_S_LlaAI06ORF1089P_TRD1-CR1_like Location: 1872-2346 bp Feature: domain Description: RMtype1_S_LlaAI06ORF1089P_TRD1-CR1_like Location: 1872 -2 346 bp Feature: domain Description: RMtype1_S_Sau1132ORF3780P-TRD2-CR2_like Location: 2418-2679 bp Feature: domain Description: RMtype1_S_Sau1132 ORF3780P-TRD2 -CR2 _like Location: 2 418-2 679 bp Feature: gene Location: 2801-4375 bp Ori: OTK69375.1 Feature: domain Description: HsdM Location: 2819-4346 bp Feature: domain Description: HsdM Location: 2 819-4346 bp Feature: gene Location: 4511-5413 bp Ori: OTK69376.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4721-5246 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 472 1-52 46 bp Feature: gene Location: 5403-5696 bp Ori: OTK69377.1 Feature: domain Description: HTH_XRE Location: 5427-5580 bp Feature: domain Description: HTH_XRE Location: 542 7-5580 bp Feature: gene Location: 6492-6989 bp Ori: OTK69378.1 Feature: domain Description: YafO_toxin Location: 6660-6942 bp Feature: domain Description: YafO_toxin Location: 6660-6942 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_LlaAI06ORF1089P_TRD1-CR1_like (cd17288), RMtype1_S_Sau1132ORF3780P-TRD2-CR2_like (cd17266), HsdM (COG0286), RVT-Retrons, HTH_XRE (smart00530), YafO_toxin (pfam13957)