myRT

myRT report for GCA_002142335.1_ASM214233v1

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Seq: NBVU01000270.1 Escherichia coli strain ARS-CC9635 NODE_270_length_3567_cov_4.98825, whole genome shotgun sequence (3567 bp)
Overview 1 RT 1: 1024-3472 bp Neighborhood of RT #1 [1024, 3564] RVT-GII Feature: gene Location: 1024-1338 bp Feature: gene Location: 2030-2239 bp Feature: gene Location: 2374-3564 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2641-3472 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2641 -3472 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NBVU01000397.1 Escherichia coli strain ARS-CC9635 NODE_397_length_901_cov_1.71359, whole genome shotgun sequence (901 bp)
Overview 1 RT 1: 3-870 bp Neighborhood of RT #1 [3, 899] RVT-Retrons TIR_2 Feature: gene Location: 3-899 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6-312 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6-312 bp Feature: domain Description: TIR_2 Location: 639-870 bp Feature: domain Description: TIR_2 Location: 639-870 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, TIR_2 (pfam13676)

Seq: NBVU01000039.1 Escherichia coli strain ARS-CC9635 NODE_39_length_31706_cov_7.47349, whole genome shotgun sequence (31706 bp)
Overview 1 RT 1: 28738-31702 bp Neighborhood of RT #1 [28738, 31704] prfC PRK10597 RVT-Retrons Feature: gene Location: 28738-30324 bp Feature: domain Description: prfC Location: 28756-30322 bp Feature: domain Description: prfC Location: 28756-3 03 22 bp Feature: gene Location: 30544-30804 bp Feature: domain Description: PRK10597 Location: 30547-30787 bp Feature: domain Description: PRK10597 Location: 3 0547-3 0787 bp Feature: gene Location: 31162-31704 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31453-31702 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 1453 -3 1702 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfC (TIGR00503), PRK10597 (DNA damage-inducible protein I; Provisional), RVT-Retrons