myRT

myRT report for GCA_002146315.1_ASM214631v1

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Seq: NFCH01000021.1 Bacillus thuringiensis serovar amagiensis strain BGSC 4AE1 4AE1_contig000021, whole genome shotgun sequence (7738 bp)
Overview 1 RT 1: 77-7048 bp Neighborhood of RT #1 [77, 7048] RVT-GII Intron_maturas2 HNHc RVT-GII GIIM TraG-D_C Ftsk_gamma Feature: gene Location: 77-1894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347-1169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347-1 1 69 bp Feature: domain Description: Intron_maturas2 Location: 1250-1544 bp Feature: domain Description: Intron_maturas2 Location: 1 250-1 544 bp Feature: domain Description: HNHc Note: nucleases Location: 1691-1865 bp Feature: domain Description: HNHc Note: nucleases Location: 1 691 -1 865 bp Feature: gene Location: 1995-2201 bp Feature: gene Location: 2873-4747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3173-3878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 73-3878 bp Feature: domain Description: GIIM Note: maturase Location: 3992-4160 bp Feature: domain Description: GIIM Note: maturase Location: 3992-41 60 bp Feature: gene Location: 4977-6662 bp Feature: domain Description: TraG-D_C Location: 4992-5310 bp Feature: domain Description: TraG-D_C Location: 4992-531 0 bp Feature: domain Description: Ftsk_gamma Location: 5715-5895 bp Feature: domain Description: Ftsk_gamma Location: 571 5-5895 bp Feature: gene Location: 6821-7048 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Intron_maturas2 (pfam01348), HNHc (smart00507), TraG-D_C (pfam12696), Ftsk_gamma (smart00843)

Seq: NFCH01000019.1 Bacillus thuringiensis serovar amagiensis strain BGSC 4AE1 4AE1_contig000019, whole genome shotgun sequence (13766 bp)
Overview 1 RT 1: 77-2337 bp Neighborhood of RT #1 [77, 2337] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 77-1894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347-1169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347-1169 bp Feature: domain Description: Intron_maturas2 Location: 1250-1544 bp Feature: domain Description: Intron_maturas2 Location: 12 50-1544 bp Feature: domain Description: HNHc Note: nucleases Location: 1691-1865 bp Feature: domain Description: HNHc Note: nucleases Location: 1691-1865 bp Feature: gene Location: 1995-2165 bp Feature: gene Location: 2155-2337 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFCH01000020.1 Bacillus thuringiensis serovar amagiensis strain BGSC 4AE1 4AE1_contig000020, whole genome shotgun sequence (5014 bp)
Overview 1 RT 1: 77-3523 bp Neighborhood of RT #1 [77, 3523] RVT-GII Intron_maturas2 HNHc prsA Feature: gene Location: 77-1894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347-1169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 47-1169 bp Feature: domain Description: Intron_maturas2 Location: 1250-1544 bp Feature: domain Description: Intron_maturas2 Location: 1250-1544 bp Feature: domain Description: HNHc Note: nucleases Location: 1691-1865 bp Feature: domain Description: HNHc Note: nucleases Location: 1691-1865 bp Feature: gene Location: 2209-3060 bp Feature: domain Description: prsA Location: 2212-3058 bp Feature: domain Description: prsA Location: 2212-3 058 bp Feature: gene Location: 3253-3523 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prsA (PRK04405), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFCH01000043.1 Bacillus thuringiensis serovar amagiensis strain BGSC 4AE1 4AE1_contig000043, whole genome shotgun sequence (12268 bp)
Overview 1 RT 1: 9672-11213 bp Neighborhood of RT #1 [9672, 12088] RVT-GII Feature: gene Location: 9672-9875 bp Feature: gene Location: 9957-10160 bp Feature: gene Location: 10157-12088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10478-11213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104 78-11213 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NFCH01000119.1 Bacillus thuringiensis serovar amagiensis strain BGSC 4AE1 4AE1_contig000119, whole genome shotgun sequence (6159 bp)
Overview 1 RT 1: 1284-5864 bp Neighborhood of RT #1 [1284, 5864] PRK06850 HEPN RVT-GII Feature: gene Location: 1284-2732 bp Feature: domain Description: PRK06850 Location: 1299-2526 bp Feature: domain Description: PRK0685 0 Location: 1299-25 26 bp Feature: gene Location: 2859-3302 bp Feature: domain Description: HEPN Location: 2913-3261 bp Feature: domain Description: HEPN Location: 2913-3261 bp Feature: gene Location: 3448-5379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3769-4504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3769-45 04 bp Feature: gene Location: 5376-5579 bp Feature: gene Location: 5661-5864 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06850 (hypothetical protein; Provisional), HEPN (smart00748), RVT-GII

Seq: NFCH01000066.1 Bacillus thuringiensis serovar amagiensis strain BGSC 4AE1 4AE1_contig000066, whole genome shotgun sequence (21780 bp)
Overview 1 RT 1: 9002-15880 bp Neighborhood of RT #1 [9002, 15880] SF2_C_SNF RVT-GII Intron_maturas2 HNHc DEXDc Feature: gene Location: 9002-9715 bp Feature: gene Location: 9732-11387 bp Feature: domain Description: SF2_C_SNF Location: 10536-10779 bp Feature: domain Description: SF2_C_SNF Location: 10536 -10779 bp Feature: gene Location: 11388-13223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11655-12486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116 55-12486 bp Feature: domain Description: Intron_maturas2 Location: 12555-12930 bp Feature: domain Description: Intron_maturas2 Location: 12555-12930 bp Feature: domain Description: HNHc Note: nucleases Location: 13023-13170 bp Feature: domain Description: HNHc Note: nucleases Location: 13023-13170 bp Feature: gene Location: 13827-15581 bp Feature: domain Description: DEXDc Location: 14607-15558 bp Feature: domain Description: DEXDc Location: 146 07-15558 bp Feature: gene Location: 15653-15880 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DEXDc (smart00487), SF2_C_SNF (cd18793)

Seq: NFCH01000060.1 Bacillus thuringiensis serovar amagiensis strain BGSC 4AE1 4AE1_contig000060, whole genome shotgun sequence (16914 bp)
Overview 1 RT 1: 7169-13899 bp Neighborhood of RT #1 [7169, 13910] MgtE RimL RVT-GII Intron_maturas2 HNHc Lysozyme_like YxeA Feature: gene Location: 7169-8497 bp Feature: domain Description: MgtE Location: 7184-8489 bp Feature: domain Description: MgtE Location: 7 184-8489 bp Feature: gene Location: 9132-9638 bp Feature: domain Description: RimL Location: 9141-9636 bp Feature: domain Description: RimL Location: 9141-9636 bp Feature: gene Location: 10135-11958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10399-11233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10399-11233 bp Feature: domain Description: Intron_maturas2 Location: 11302-11641 bp Feature: domain Description: Intron_maturas2 Location: 11302-11641 bp Feature: domain Description: HNHc Note: nucleases Location: 11779-11935 bp Feature: domain Description: HNHc Note: nucleases Location: 117 7 9-11935 bp Feature: gene Location: 12534-13115 bp Feature: domain Description: Lysozyme_like Location: 12669-13104 bp Feature: domain Description: Lysozyme_like Location: 12669-13104 bp Feature: gene Location: 13542-13910 bp Feature: domain Description: YxeA Location: 13593-13899 bp Feature: domain Description: YxeA Location: 13593-13899 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Lysozyme_like (pfam13702), YxeA (COG5294), MgtE (pfam01769), RimL (COG1670)

Seq: NFCH01000157.1 Bacillus thuringiensis serovar amagiensis strain BGSC 4AE1 4AE1_contig000157, whole genome shotgun sequence (26423 bp)
Overview 1 RT 1: 23636-26318 bp Neighborhood of RT #1 [23636, 26347] PRK14127 PRK13660 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 23636-23971 bp Feature: domain Description: PRK14127 Location: 23648-23969 bp Feature: domain Description: PRK14127 Location: 23648 -23969 bp Feature: gene Location: 24070-24555 bp Feature: domain Description: PRK13660 Location: 24205-24544 bp Feature: domain Description: PRK13660 Location: 24205-24544 bp Feature: gene Location: 24530-26347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24800-25622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 248 00-25622 bp Feature: domain Description: Intron_maturas2 Location: 25703-25997 bp Feature: domain Description: Intron_maturas2 Location: 25703-25997 bp Feature: domain Description: HNHc Note: nucleases Location: 26144-26318 bp Feature: domain Description: HNHc Note: nucleases Location: 26144-26318 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK14127 (cell division regulator GpsB), PRK13660 (hypothetical protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFCH01000121.1 Bacillus thuringiensis serovar amagiensis strain BGSC 4AE1 4AE1_contig000121, whole genome shotgun sequence (17461 bp)
Overview 1 RT 1: 5365-8769 bp Neighborhood of RT #1 [5365, 8774] RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 5365-5751 bp Feature: gene Location: 6058-6447 bp Feature: gene Location: 6591-7898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6876-7515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6876-7515 bp Feature: domain Description: GIIM Note: maturase Location: 7590-7815 bp Feature: domain Description: GIIM Note: maturase Location: 759 0-7815 bp Feature: gene Location: 8072-8251 bp Feature: gene Location: 8412-8774 bp Feature: domain Description: DDE_Tnp_1 Location: 8583-8769 bp Feature: domain Description: DDE_Tnp_1 Location: 8583-8769 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609)

Seq: NFCH01000035.1 Bacillus thuringiensis serovar amagiensis strain BGSC 4AE1 4AE1_contig000035, whole genome shotgun sequence (21409 bp)
Overview 1 RT 1: 16167-21114 bp Neighborhood of RT #1 [16167, 21114] Glyco_hydro_8 EamA EamA RVT-GII Feature: gene Location: 16167-17528 bp Feature: domain Description: Glyco_hydro_8 Location: 16413-17439 bp Feature: domain Description: Glyco_hydro_8 Location: 16413-17439 bp Feature: gene Location: 17667-18494 bp Feature: domain Description: EamA Location: 17673-18006 bp Feature: domain Description: EamA Location: 17673-18006 bp Feature: domain Description: EamA Location: 18036-18432 bp Feature: domain Description: EamA Location: 18036-18432 bp Feature: gene Location: 18698-20629 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19019-19754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19019-19754 bp Feature: gene Location: 20626-20829 bp Feature: gene Location: 20911-21114 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glyco_hydro_8 (pfam01270), EamA (pfam00892), RVT-GII

Seq: NFCH01000049.1 Bacillus thuringiensis serovar amagiensis strain BGSC 4AE1 4AE1_contig000049, whole genome shotgun sequence (65139 bp)
Overview 1 RT 1: 181-2597 bp Neighborhood of RT #1 [181, 2597] RVT-GII Feature: gene Location: 181-2112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 502-1237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 502-1237 bp Feature: gene Location: 2109-2312 bp Feature: gene Location: 2394-2597 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII