myRT

myRT report for GCA_002146785.1_ASM214678v1

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Seq: NFDJ01000043.1 Bacillus thuringiensis serovar poloniensis strain BGSC 4BR1 4BR1_contig000043, whole genome shotgun sequence (17463 bp)
Overview 1 RT 1: 122-4596 bp Neighborhood of RT #1 [122, 7838] RVT-GII Intron_maturas2 HNHc CwlT_like TrbL Feature: gene Location: 122-1945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 386-1220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 386-1 220 bp Feature: domain Description: Intron_maturas2 Location: 1289-1628 bp Feature: domain Description: Intron_maturas2 Location: 1 289-1 628 bp Feature: domain Description: HNHc Note: nucleases Location: 1766-1922 bp Feature: domain Description: HNHc Note: nucleases Location: 1 766-1 922 bp Feature: gene Location: 2521-3822 bp Feature: domain Description: CwlT_like Location: 3370-3811 bp Feature: domain Description: CwlT_like Location: 3370-381 1 bp Feature: gene Location: 3819-7838 bp Feature: domain Description: TrbL Location: 4098-4596 bp Feature: domain Description: TrbL Location: 4098-4596 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), CwlT_like, TrbL (pfam04610)

Seq: NFDJ01000084.1 Bacillus thuringiensis serovar poloniensis strain BGSC 4BR1 4BR1_contig000084, whole genome shotgun sequence (7132 bp)
Overview 1 RT 1: 187-6291 bp Neighborhood of RT #1 [187, 6291] RVT-GII HNHc RVT-GII Feature: gene Location: 187-2199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 505-1237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 505-12 37 bp Feature: domain Description: HNHc Note: nucleases Location: 1921-2071 bp Feature: domain Description: HNHc Note: nucleases Location: 192 1-2 071 bp Feature: gene Location: 2945-3817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3242-3809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 42 -3809 bp Feature: gene Location: 4529-5803 bp Feature: gene Location: 5821-6291 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NFDJ01000085.1 Bacillus thuringiensis serovar poloniensis strain BGSC 4BR1 4BR1_contig000085, whole genome shotgun sequence (9283 bp)
Overview 1 RT 1: 187-8673 bp Neighborhood of RT #1 [187, 8696] RVT-GII HNHc NlpD Spr RVT-GII Intron_maturas2 HNHc Feature: gene Location: 187-2166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 484-1204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 484-1204 bp Feature: domain Description: HNHc Note: nucleases Location: 1888-2038 bp Feature: domain Description: HNHc Note: nucleases Location: 1888-203 8 bp Feature: gene Location: 2908-3426 bp Feature: gene Location: 3442-3957 bp Feature: gene Location: 5252-5827 bp Feature: gene Location: 5844-6689 bp Feature: domain Description: NlpD Location: 5859-6261 bp Feature: domain Description: NlpD Location: 5859-6261 bp Feature: domain Description: Spr Location: 6294-6630 bp Feature: domain Description: Spr Location: 6294-663 0 bp Feature: gene Location: 6873-8696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7137-7971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 713 7-7971 bp Feature: domain Description: Intron_maturas2 Location: 8040-8379 bp Feature: domain Description: Intron_maturas2 Location: 8040-83 79 bp Feature: domain Description: HNHc Note: nucleases Location: 8517-8673 bp Feature: domain Description: HNHc Note: nucleases Location: 8517-8673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), NlpD (COG0739), Spr (COG0791), Intron_maturas2 (pfam01348)

Seq: NFDJ01000077.1 Bacillus thuringiensis serovar poloniensis strain BGSC 4BR1 4BR1_contig000077, whole genome shotgun sequence (165481 bp)
Overview 1 RT 1: 160658-164825 bp Neighborhood of RT #1 [160658, 164851] GH25_PlyB-like prsA RVT-GII Intron_maturas2 HNHc Feature: gene Location: 160658-161656 bp Feature: domain Description: GH25_PlyB-like Location: 160667-161183 bp Feature: domain Description: GH25_PlyB-like Location: 160667-161183 bp Feature: gene Location: 161854-162705 bp Feature: domain Description: prsA Location: 161857-162703 bp Feature: domain Description: prsA Location: 161857-162703 bp Feature: gene Location: 163034-164851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 163304-164129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 163304 -164 129 bp Feature: domain Description: Intron_maturas2 Location: 164210-164498 bp Feature: domain Description: Intron_maturas2 Location: 164 210-164 4 98 bp Feature: domain Description: HNHc Note: nucleases Location: 164648-164825 bp Feature: domain Description: HNHc Note: nucleases Location: 164 64 8-164 825 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GH25_PlyB-like (cd06523), prsA (PRK04405), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDJ01000147.1 Bacillus thuringiensis serovar poloniensis strain BGSC 4BR1 4BR1_contig000147, whole genome shotgun sequence (130552 bp)
Overview 1 RT 1: 122-3517 bp Neighborhood of RT #1 [122, 3517] RVT-GII Intron_maturas2 HNHc Lysozyme_like Feature: gene Location: 122-1945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 386-1220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 386-1220 bp Feature: domain Description: Intron_maturas2 Location: 1289-1628 bp Feature: domain Description: Intron_maturas2 Location: 1289-1628 bp Feature: domain Description: HNHc Note: nucleases Location: 1766-1922 bp Feature: domain Description: HNHc Note: nucleases Location: 1766-1922 bp Feature: gene Location: 2521-3102 bp Feature: domain Description: Lysozyme_like Location: 2656-3091 bp Feature: domain Description: Lysozyme_like Location: 265 6-3091 bp Feature: gene Location: 3323-3517 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Lysozyme_like (pfam13702)

Seq: NFDJ01000020.1 Bacillus thuringiensis serovar poloniensis strain BGSC 4BR1 4BR1_contig000020, whole genome shotgun sequence (5354 bp)
Overview 1 RT 1: 105-4513 bp Neighborhood of RT #1 [105, 4513] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 105-1922 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 375-1200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 375-1200 bp Feature: domain Description: Intron_maturas2 Location: 1281-1569 bp Feature: domain Description: Intron_maturas2 Location: 1281-156 9 bp Feature: domain Description: HNHc Note: nucleases Location: 1719-1896 bp Feature: domain Description: HNHc Note: nucleases Location: 1719-1896 bp Feature: gene Location: 2514-4025 bp Feature: gene Location: 4043-4513 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDJ01000044.1 Bacillus thuringiensis serovar poloniensis strain BGSC 4BR1 4BR1_contig000044, whole genome shotgun sequence (5791 bp)
Overview 1 RT 1: 588-4273 bp Neighborhood of RT #1 [588, 4273] RVT-GII Intron_maturas2 HNHc RimL Feature: gene Location: 588-2411 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 852-1686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 852-1686 bp Feature: domain Description: Intron_maturas2 Location: 1755-2094 bp Feature: domain Description: Intron_maturas2 Location: 17 55-2094 bp Feature: domain Description: HNHc Note: nucleases Location: 2232-2388 bp Feature: domain Description: HNHc Note: nucleases Location: 2232-2388 bp Feature: gene Location: 2913-3419 bp Feature: domain Description: RimL Location: 2922-3417 bp Feature: domain Description: RimL Location: 2922-3417 bp Feature: gene Location: 3884-4273 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RimL (COG1670), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDJ01000117.1 Bacillus thuringiensis serovar poloniensis strain BGSC 4BR1 4BR1_contig000117, whole genome shotgun sequence (16468 bp)
Overview 1 RT 1: 11011-15812 bp Neighborhood of RT #1 [11011, 15838] HTH_XRE TraG-D_C Ftsk_gamma Ftsk_gamma RVT-GII Intron_maturas2 HNHc Feature: gene Location: 11011-11571 bp Feature: domain Description: HTH_XRE Location: 11023-11194 bp Feature: domain Description: HTH_XRE Location: 11023-11194 bp Feature: gene Location: 11893-13893 bp Feature: domain Description: TraG-D_C Location: 12010-12370 bp Feature: domain Description: TraG-D_C Location: 12010-12370 bp Feature: domain Description: Ftsk_gamma Location: 12775-12955 bp Feature: domain Description: Ftsk_gamma Location: 12775-12955 bp Feature: domain Description: Ftsk_gamma Location: 13087-13225 bp Feature: domain Description: Ftsk_gamma Location: 1308 7-13225 bp Feature: gene Location: 14021-15838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14291-15116 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14291-15116 bp Feature: domain Description: Intron_maturas2 Location: 15197-15485 bp Feature: domain Description: Intron_maturas2 Location: 15197-1548 5 bp Feature: domain Description: HNHc Note: nucleases Location: 15635-15812 bp Feature: domain Description: HNHc Note: nucleases Location: 15635-158 12 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDJ01000082.1 Bacillus thuringiensis serovar poloniensis strain BGSC 4BR1 4BR1_contig000082, whole genome shotgun sequence (11968 bp)
Overview 1 RT 1: 1-2961 bp Neighborhood of RT #1 [1, 2961] RVT-GII HNHc group_II_RT_mat HNHc Feature: gene Location: 1-1266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-304 bp Feature: domain Description: HNHc Note: nucleases Location: 988-1138 bp Feature: domain Description: HNHc Note: nucleases Location: 9 88-1138 bp Feature: gene Location: 1417-2400 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1453-1837 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1453-1837 bp Feature: domain Description: HNHc Note: nucleases Location: 2149-2287 bp Feature: domain Description: HNHc Note: nucleases Location: 2149 -2287 bp Feature: gene Location: 2521-2961 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), group_II_RT_mat (TIGR04416)

Seq: NFDJ01000083.1 Bacillus thuringiensis serovar poloniensis strain BGSC 4BR1 4BR1_contig000083, whole genome shotgun sequence (4254 bp)
Overview 1 RT 1: 1-3567 bp Neighborhood of RT #1 [1, 3567] RVT-GII HNHc RVT-GII Intron_maturas2 HNHc PRTRC_ThiF Feature: gene Location: 1-1266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-304 bp Feature: domain Description: HNHc Note: nucleases Location: 988-1138 bp Feature: domain Description: HNHc Note: nucleases Location: 988-1138 bp Feature: gene Location: 1447-2370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1456-1597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1456-1597 bp Feature: domain Description: Intron_maturas2 Location: 1735-2026 bp Feature: domain Description: Intron_maturas2 Location: 1735-2026 bp Feature: domain Description: HNHc Note: nucleases Location: 2158-2317 bp Feature: domain Description: HNHc Note: nucleases Location: 2158-2317 bp Feature: gene Location: 2625-3176 bp Feature: domain Description: PRTRC_ThiF Location: 2700-3144 bp Feature: domain Description: PRTRC_ThiF Location: 2700-3144 bp Feature: gene Location: 3196-3567 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Intron_maturas2 (pfam01348), PRTRC_ThiF (TIGR03736)

Seq: NFDJ01000045.1 Bacillus thuringiensis serovar poloniensis strain BGSC 4BR1 4BR1_contig000045, whole genome shotgun sequence (117040 bp)
Overview 1 RT 1: 98470-104200 bp Neighborhood of RT #1 [98470, 104244] Peptidases_S8_Subtilisin_subset RVT-GII GlpA Feature: gene Location: 98470-99255 bp Feature: gene Location: 99271-100242 bp Feature: domain Description: Peptidases_S8_Subtilisin_subset Location: 99490-100138 bp Feature: domain Description: Peptidases_S8_Subtilisin_subset Location: 99490-100138 bp Feature: gene Location: 100790-101904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101096-101315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101096-101315 bp Feature: gene Location: 101926-102204 bp Feature: gene Location: 102562-104244 bp Feature: domain Description: GlpA Location: 102589-104200 bp Feature: domain Description: GlpA Location: 102589-104200 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GlpA (COG0578), Peptidases_S8_Subtilisin_subset (cd07477)

Seq: NFDJ01000021.1 Bacillus thuringiensis serovar poloniensis strain BGSC 4BR1 4BR1_contig000021, whole genome shotgun sequence (13097 bp)
Overview 1 RT 1: 105-3611 bp Neighborhood of RT #1 [105, 3611] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 105-1922 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 375-1200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 375-12 00 bp Feature: domain Description: Intron_maturas2 Location: 1281-1569 bp Feature: domain Description: Intron_maturas2 Location: 12 81-1569 bp Feature: domain Description: HNHc Note: nucleases Location: 1719-1896 bp Feature: domain Description: HNHc Note: nucleases Location: 1719-1896 bp Feature: gene Location: 2741-2959 bp Feature: gene Location: 3204-3611 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDJ01000051.1 Bacillus thuringiensis serovar poloniensis strain BGSC 4BR1 4BR1_contig000051, whole genome shotgun sequence (5067 bp)
Overview 1 RT 1: 92-4659 bp Neighborhood of RT #1 [92, 4940] DDE_Tnp_1 RVT-GII GIIM DDE_Tnp_1 DDE_Tnp_1 Feature: gene Location: 92-1141 bp Feature: domain Description: DDE_Tnp_1 Location: 449-1136 bp Feature: domain Description: DDE_Tnp_1 Location: 449-113 6 bp Feature: gene Location: 1302-1481 bp Feature: gene Location: 1655-2830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1940-2579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1940-2579 bp Feature: domain Description: GIIM Note: maturase Location: 2654-2822 bp Feature: domain Description: GIIM Note: maturase Location: 2654-2822 bp Feature: gene Location: 3105-3338 bp Feature: domain Description: DDE_Tnp_1 Location: 3114-3216 bp Feature: domain Description: DDE_Tnp_1 Location: 3114-3216 bp Feature: gene Location: 3504-4940 bp Feature: domain Description: DDE_Tnp_1 Location: 3861-4659 bp Feature: domain Description: DDE_Tnp_1 Location: 3861-4659 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609)

Seq: NFDJ01000136.1 Bacillus thuringiensis serovar poloniensis strain BGSC 4BR1 4BR1_contig000136, whole genome shotgun sequence (97229 bp)
Overview 1 RT 1: 67877-72201 bp Neighborhood of RT #1 [67877, 72201] RVT-GII GIIM PBECR4 Feature: gene Location: 67877-68749 bp Feature: gene Location: 69301-69573 bp Feature: gene Location: 69595-70893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69901-70531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69901-70531 bp Feature: domain Description: GIIM Note: maturase Location: 70612-70837 bp Feature: domain Description: GIIM Note: maturase Location: 70612-70837 bp Feature: gene Location: 71055-71666 bp Feature: domain Description: PBECR4 Location: 71085-71520 bp Feature: domain Description: PBECR4 Location: 71085-71520 bp Feature: gene Location: 71953-72201 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PBECR4 (pfam18813)