myRT

myRT report for GCA_002146905.1_ASM214690v1

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Seq: NFDQ01000012.1 Bacillus thuringiensis serovar vazensis strain BGSC 4CE1 4CE1_contig000012, whole genome shotgun sequence (217604 bp)
Overview 1 RT 1: 53187-60111 bp Neighborhood of RT #1 [53187, 60111] COG4951 HTH_CRP COG4637 COG4637 RVT-Retrons DusA Feature: gene Location: 53187-54605 bp Feature: domain Description: COG4951 Location: 53280-53958 bp Feature: domain Description: COG4951 Location: 53280-53958 bp Feature: domain Description: HTH_CRP Location: 54360-54444 bp Feature: domain Description: HTH_CRP Location: 54360-54444 bp Feature: gene Location: 54867-56834 bp Feature: domain Description: COG4637 Location: 54870-55038 bp Feature: domain Description: COG4637 Location: 54870-55038 bp Feature: domain Description: COG4637 Location: 55632-55893 bp Feature: domain Description: COG4637 Location: 55632-55893 bp Feature: gene Location: 57046-58071 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 57166-57730 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 571 66-57730 bp Feature: gene Location: 58292-59281 bp Feature: domain Description: DusA Location: 58316-59246 bp Feature: domain Description: DusA Location: 5831 6-59246 bp Feature: gene Location: 59542-60111 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4951 (Uncharacterized protein ), HTH_CRP (smart00419), COG4637 (Predicted ATPase ), RVT-Retrons, DusA (COG0042)

Seq: NFDQ01000068.1 Bacillus thuringiensis serovar vazensis strain BGSC 4CE1 4CE1_contig000068, whole genome shotgun sequence (13663 bp)
Overview 1 RT 1: 1-3961 bp Neighborhood of RT #1 [1, 4198] DEDD_Tnp_IS110 DDE_Tnp_1 RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 1-707 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 22-484 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 2 2 -484 bp Feature: gene Location: 749-1180 bp Feature: domain Description: DDE_Tnp_1 Location: 758-860 bp Feature: domain Description: DDE_Tnp_1 Location: 758-860 bp Feature: gene Location: 1324-2631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1609-2248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1609-2 2 48 bp Feature: domain Description: GIIM Note: maturase Location: 2323-2548 bp Feature: domain Description: GIIM Note: maturase Location: 2 32 3-2 548 bp Feature: gene Location: 2805-2984 bp Feature: gene Location: 3145-4198 bp Feature: domain Description: DDE_Tnp_1 Location: 3502-3961 bp Feature: domain Description: DDE_Tnp_1 Location: 3502 -3961 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DEDD_Tnp_IS110 (pfam01548), DDE_Tnp_1 (pfam01609)

Seq: NFDQ01000077.1 Bacillus thuringiensis serovar vazensis strain BGSC 4CE1 4CE1_contig000077, whole genome shotgun sequence (292005 bp)
Overview 1 RT 1: 8285-11479 bp Neighborhood of RT #1 [8285, 11502] Transposase_20 RVT-GII PRK10420 DUF4870 Feature: gene Location: 8285-8587 bp Feature: gene Location: 8683-8868 bp Feature: domain Description: Transposase_20 Location: 8689-8818 bp Feature: domain Description: Transposase_20 Location: 8689-8818 bp Feature: gene Location: 8798-9028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8846-8966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8846-8966 bp Feature: gene Location: 9229-10887 bp Feature: domain Description: PRK10420 Location: 9232-10885 bp Feature: domain Description: PRK10420 Location: 923 2-10885 bp Feature: gene Location: 11185-11502 bp Feature: domain Description: DUF4870 Location: 11203-11479 bp Feature: domain Description: DUF4870 Location: 11203 -11479 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4870 (pfam09685), Transposase_20 (pfam02371), RVT-GII, PRK10420 (L-lactate permease; Provisional)