myRT

myRT report for GCA_002146945.1_ASM214694v1

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Seq: NFDT01000013.1 Bacillus thuringiensis serovar subtoxicus strain BGSC 4I4 4I4_contig000013, whole genome shotgun sequence (6774 bp)
Overview 1 RT 1: 709-5579 bp Neighborhood of RT #1 [709, 5758] RVT-GII GIIM TraG-D_C Ftsk_gamma Ftsk_gamma rpsA Feature: gene Location: 709-2583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1009-1714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 009-1 71 4 bp Feature: domain Description: GIIM Note: maturase Location: 1828-1996 bp Feature: domain Description: GIIM Note: maturase Location: 1 828-1 996 bp Feature: gene Location: 2816-4516 bp Feature: domain Description: TraG-D_C Location: 2828-3146 bp Feature: domain Description: TraG-D_C Location: 2828-31 46 bp Feature: domain Description: Ftsk_gamma Location: 3506-3686 bp Feature: domain Description: Ftsk_gamma Location: 3506-3686 bp Feature: domain Description: Ftsk_gamma Location: 3839-4013 bp Feature: domain Description: Ftsk_gamma Location: 3839-401 3 bp Feature: gene Location: 4775-5758 bp Feature: domain Description: rpsA Location: 5042-5579 bp Feature: domain Description: rpsA Location: 5042-5579 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), Ftsk_gamma (smart00843), rpsA (TIGR00717), RVT-GII, GIIM (pfam08388)

Seq: NFDT01000174.1 Bacillus thuringiensis serovar subtoxicus strain BGSC 4I4 4I4_contig000174, whole genome shotgun sequence (57267 bp)
Overview 1 RT 1: 53302-57053 bp Neighborhood of RT #1 [53302, 57169] TDH_SDR_e gly_Cac_T_rel RVT-GII HNHc Feature: gene Location: 53302-54267 bp Feature: domain Description: TDH_SDR_e Location: 53311-54229 bp Feature: domain Description: TDH_SDR_e Location: 53311-542 2 9 bp Feature: gene Location: 54312-54650 bp Feature: domain Description: gly_Cac_T_rel Location: 54318-54648 bp Feature: domain Description: gly_Cac_T_rel Location: 54318-54648 bp Feature: gene Location: 55364-57169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55658-56354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55658-56354 bp Feature: domain Description: HNHc Note: nucleases Location: 56915-57053 bp Feature: domain Description: HNHc Note: nucleases Location: 56915-57053 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TDH_SDR_e (cd05272), gly_Cac_T_rel (TIGR01825), RVT-GII, HNHc (smart00507)

Seq: NFDT01000168.1 Bacillus thuringiensis serovar subtoxicus strain BGSC 4I4 4I4_contig000168, whole genome shotgun sequence (37651 bp)
Overview 1 RT 1: 32490-36832 bp Neighborhood of RT #1 [32490, 36948] GltS_FMN OYE_like_FMN RVT-GII HNHc Feature: gene Location: 32490-34064 bp Feature: domain Description: GltS_FMN Location: 32637-33999 bp Feature: domain Description: GltS_FMN Location: 3 263 7-3 3 999 bp Feature: gene Location: 34132-35091 bp Feature: domain Description: OYE_like_FMN Location: 34183-35062 bp Feature: domain Description: OYE_like_FMN Location: 3 4183 -3 5062 bp Feature: gene Location: 35143-36948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35437-36133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 543 7-3 613 3 bp Feature: domain Description: HNHc Note: nucleases Location: 36694-36832 bp Feature: domain Description: HNHc Note: nucleases Location: 3 6694-3 683 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GltS_FMN (cd02808), OYE_like_FMN (cd02933), RVT-GII, HNHc (smart00507)

Seq: NFDT01000190.1 Bacillus thuringiensis serovar subtoxicus strain BGSC 4I4 4I4_contig000190, whole genome shotgun sequence (39734 bp)
Overview 1 RT 1: 99-3856 bp Neighborhood of RT #1 [99, 3861] RVT-GII HNHc FadH CdnL Feature: gene Location: 99-1904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 393-1089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 393-1089 bp Feature: domain Description: HNHc Note: nucleases Location: 1650-1788 bp Feature: domain Description: HNHc Note: nucleases Location: 1650-1788 bp Feature: gene Location: 2567-2821 bp Feature: domain Description: FadH Location: 2654-2786 bp Feature: domain Description: FadH Location: 2654 -2786 bp Feature: gene Location: 3385-3861 bp Feature: domain Description: CdnL Location: 3403-3856 bp Feature: domain Description: CdnL Location: 34 03-3856 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FadH (COG1902), CdnL (COG1329), RVT-GII, HNHc (smart00507)

Seq: NFDT01000076.1 Bacillus thuringiensis serovar subtoxicus strain BGSC 4I4 4I4_contig000076, whole genome shotgun sequence (7644 bp)
Overview 1 RT 1: 4359-6349 bp Neighborhood of RT #1 [4359, 6936] SUKH_6 RVT-GII GIIM Feature: gene Location: 4359-4613 bp Feature: gene Location: 4703-4831 bp Feature: domain Description: SUKH_6 Location: 4760-4832 bp Feature: domain Description: SUKH_6 Location: 4760-4832 bp Feature: gene Location: 5062-6936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5362-6067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 362-6067 bp Feature: domain Description: GIIM Note: maturase Location: 6181-6349 bp Feature: domain Description: GIIM Note: maturase Location: 6181-6349 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SUKH_6 (pfam14568), RVT-GII, GIIM (pfam08388)

Seq: NFDT01000022.1 Bacillus thuringiensis serovar subtoxicus strain BGSC 4I4 4I4_contig000022, whole genome shotgun sequence (31165 bp)
Overview 1 RT 1: 360-5860 bp Neighborhood of RT #1 [360, 5860] DEDD_Tnp_IS110 COG3547 PDDEXK_2 RVT_N RVT-GII GIIM HNHc PDDEXK_2 Feature: gene Location: 360-1589 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 375-855 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 375-855 bp Feature: domain Description: COG3547 Location: 1089-1467 bp Feature: domain Description: COG3547 Location: 1089-146 7 bp Feature: gene Location: 1733-2344 bp Feature: domain Description: PDDEXK_2 Location: 1838-2315 bp Feature: domain Description: PDDEXK_2 Location: 1838-2315 bp Feature: gene Location: 2319-4145 bp Feature: RT Description: RVT_N Location: 2367-2610 bp Feature: RT Description: RVT_N Location: 236 7-26 10 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2667-3336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26 6 7-3336 bp Feature: domain Description: GIIM Note: maturase Location: 3396-3630 bp Feature: domain Description: GIIM Note: maturase Location: 3396 -36 30 bp Feature: domain Description: HNHc Note: nucleases Location: 3828-3996 bp Feature: domain Description: HNHc Note: nucleases Location: 3828-3996 bp Feature: gene Location: 4726-4998 bp Feature: domain Description: PDDEXK_2 Location: 4756-4987 bp Feature: domain Description: PDDEXK_2 Location: 4756 -4987 bp Feature: gene Location: 5189-5860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PDDEXK_2 (pfam12784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DEDD_Tnp_IS110 (pfam01548), COG3547 (Transposase )

Seq: NFDT01000189.1 Bacillus thuringiensis serovar subtoxicus strain BGSC 4I4 4I4_contig000189, whole genome shotgun sequence (17979 bp)
Overview 1 RT 1: 704-4082 bp Neighborhood of RT #1 [704, 4393] RVT-GII HNHc gly_Cac_T_rel Methyltransf_25 Feature: gene Location: 704-2509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 998-1694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 998-1694 bp Feature: domain Description: HNHc Note: nucleases Location: 2255-2393 bp Feature: domain Description: HNHc Note: nucleases Location: 2255-2393 bp Feature: gene Location: 2609-3448 bp Feature: domain Description: gly_Cac_T_rel Location: 2639-3449 bp Feature: domain Description: gly_Cac_T_rel Location: 2639-3449 bp Feature: gene Location: 3662-4393 bp Feature: domain Description: Methyltransf_25 Location: 3809-4082 bp Feature: domain Description: Methyltransf_25 Location: 3809-4082 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT gly_Cac_T_rel (TIGR01825), Methyltransf_25 (pfam13649), RVT-GII, HNHc (smart00507)

Seq: NFDT01000188.1 Bacillus thuringiensis serovar subtoxicus strain BGSC 4I4 4I4_contig000188, whole genome shotgun sequence (4531 bp)
Overview 1 RT 1: 704-4530 bp Neighborhood of RT #1 [704, 4531] RVT-GII HNHc RVT-GII Feature: gene Location: 704-2509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 998-1694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 998 -1694 bp Feature: domain Description: HNHc Note: nucleases Location: 2255-2393 bp Feature: domain Description: HNHc Note: nucleases Location: 2255-2393 bp Feature: gene Location: 2506-2921 bp Feature: gene Location: 3498-4531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3762-4530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3762-4530 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NFDT01000012.1 Bacillus thuringiensis serovar subtoxicus strain BGSC 4I4 4I4_contig000012, whole genome shotgun sequence (81407 bp)
Overview 1 RT 1: 233-3598 bp Neighborhood of RT #1 [233, 3780] RVT-GII GIIM SUKH_6 DUF4304 Feature: gene Location: 233-2107 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 533-1238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 533-1238 bp Feature: domain Description: GIIM Note: maturase Location: 1352-1520 bp Feature: domain Description: GIIM Note: maturase Location: 1352-1520 bp Feature: gene Location: 2814-3155 bp Feature: domain Description: SUKH_6 Location: 2817-3120 bp Feature: domain Description: SUKH_6 Location: 2817-3120 bp Feature: gene Location: 3136-3780 bp Feature: domain Description: DUF4304 Location: 3196-3598 bp Feature: domain Description: DUF4304 Location: 319 6-359 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), SUKH_6 (pfam14568), DUF4304 (pfam14137)

Seq: NFDT01000105.1 Bacillus thuringiensis serovar subtoxicus strain BGSC 4I4 4I4_contig000105, whole genome shotgun sequence (16970 bp)
Overview 1 RT 1: 4324-16151 bp Neighborhood of RT #1 [4324, 16738] RVT-GII Intron_maturas2 HNHc RVT-GII HNHc RVT-GII Intron_maturas2 HNHc RVT-GII GIIM Feature: gene Location: 4324-4797 bp Feature: gene Location: 4815-5960 bp Feature: gene Location: 6561-8384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6831-7659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6831-7659 bp Feature: domain Description: Intron_maturas2 Location: 7731-8049 bp Feature: domain Description: Intron_maturas2 Location: 7731-8049 bp Feature: domain Description: HNHc Note: nucleases Location: 8202-8355 bp Feature: domain Description: HNHc Note: nucleases Location: 8202-8355 bp Feature: gene Location: 9351-11141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9648-10344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9648-10 344 bp Feature: domain Description: HNHc Note: nucleases Location: 10884-11016 bp Feature: domain Description: HNHc Note: nucleases Location: 10 884-110 16 bp Feature: gene Location: 11207-11476 bp Feature: gene Location: 12068-13885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12338-13160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12338-13160 bp Feature: domain Description: Intron_maturas2 Location: 13241-13535 bp Feature: domain Description: Intron_maturas2 Location: 13241-13535 bp Feature: domain Description: HNHc Note: nucleases Location: 13682-13856 bp Feature: domain Description: HNHc Note: nucleases Location: 13682-13856 bp Feature: gene Location: 13986-14192 bp Feature: gene Location: 14864-16738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15164-15869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15164-15869 bp Feature: domain Description: GIIM Note: maturase Location: 15983-16151 bp Feature: domain Description: GIIM Note: maturase Location: 15983-16151 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), GIIM (pfam08388)

Seq: NFDT01000191.1 Bacillus thuringiensis serovar subtoxicus strain BGSC 4I4 4I4_contig000191, whole genome shotgun sequence (20466 bp)
Overview 1 RT 1: 99-3275 bp Neighborhood of RT #1 [99, 3275] RVT-GII HNHc Lysozyme_like Feature: gene Location: 99-1904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 393-1089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 393-1089 bp Feature: domain Description: HNHc Note: nucleases Location: 1650-1788 bp Feature: domain Description: HNHc Note: nucleases Location: 1650-1788 bp Feature: gene Location: 2578-2874 bp Feature: domain Description: Lysozyme_like Location: 2713-2854 bp Feature: domain Description: Lysozyme_like Location: 2713-2854 bp Feature: gene Location: 3082-3275 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lysozyme_like (pfam13702), RVT-GII, HNHc (smart00507)

Seq: NFDT01000145.1 Bacillus thuringiensis serovar subtoxicus strain BGSC 4I4 4I4_contig000145, whole genome shotgun sequence (4956 bp)
Overview 1 RT 1: 1-2569 bp Neighborhood of RT #1 [1, 2571] RVT-GII NTP-PPase_dUTPase Feature: gene Location: 1-1034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 265-1033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 265-1033 bp Feature: gene Location: 1808-2005 bp Feature: gene Location: 2035-2571 bp Feature: domain Description: NTP-PPase_dUTPase Location: 2068-2569 bp Feature: domain Description: NTP-PPase_dUTPase Location: 2068-2569 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, NTP-PPase_dUTPase (cd11527)