myRT

myRT report for GCA_002147055.1_ASM214705v1

Download annotations/find similar RTs

Seq: NFDA01000060.1 Bacillus thuringiensis serovar londrina strain BGSC 4BF1 4BF1_contig000060, whole genome shotgun sequence (9628 bp)
Overview 1 RT 1: 5596-9017 bp Neighborhood of RT #1 [5596, 9040] NlpD Spr RVT-GII Intron_maturas2 HNHc Feature: gene Location: 5596-6171 bp Feature: gene Location: 6188-7033 bp Feature: domain Description: NlpD Location: 6203-6602 bp Feature: domain Description: NlpD Location: 6203-6602 bp Feature: domain Description: Spr Location: 6638-6974 bp Feature: domain Description: Spr Location: 6638-6974 bp Feature: gene Location: 7217-9040 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7481-8315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7481 -831 5 bp Feature: domain Description: Intron_maturas2 Location: 8384-8723 bp Feature: domain Description: Intron_maturas2 Location: 8384-8723 bp Feature: domain Description: HNHc Note: nucleases Location: 8861-9017 bp Feature: domain Description: HNHc Note: nucleases Location: 8861 -901 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NlpD (COG0739), Spr (COG0791), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDA01000076.1 Bacillus thuringiensis serovar londrina strain BGSC 4BF1 4BF1_contig000076, whole genome shotgun sequence (20314 bp)
Overview 1 RT 1: 589-4033 bp Neighborhood of RT #1 [589, 4033] RVT-GII Intron_maturas2 HNHc NlpD Spr Feature: gene Location: 589-2412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 853-1687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 853-1687 bp Feature: domain Description: Intron_maturas2 Location: 1756-2095 bp Feature: domain Description: Intron_maturas2 Location: 1756-2 095 bp Feature: domain Description: HNHc Note: nucleases Location: 2233-2389 bp Feature: domain Description: HNHc Note: nucleases Location: 2 2 33-2 389 bp Feature: gene Location: 2545-3441 bp Feature: domain Description: NlpD Location: 2587-3010 bp Feature: domain Description: NlpD Location: 2 587-3010 bp Feature: domain Description: Spr Location: 3046-3382 bp Feature: domain Description: Spr Location: 3046-3382 bp Feature: gene Location: 3458-4033 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NlpD (COG0739), Spr (COG0791), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDA01000042.1 Bacillus thuringiensis serovar londrina strain BGSC 4BF1 4BF1_contig000042, whole genome shotgun sequence (19045 bp)
Overview 1 RT 1: 11556-18227 bp Neighborhood of RT #1 [11556, 18814] RVT-GII Intron_maturas2 HNHc RVT-GII GIIM Feature: gene Location: 11556-12029 bp Feature: gene Location: 12047-13558 bp Feature: gene Location: 14144-15961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14414-15239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14414-1523 9 bp Feature: domain Description: Intron_maturas2 Location: 15320-15611 bp Feature: domain Description: Intron_maturas2 Location: 153 20-15611 bp Feature: domain Description: HNHc Note: nucleases Location: 15758-15935 bp Feature: domain Description: HNHc Note: nucleases Location: 15758-1593 5 bp Feature: gene Location: 16062-16268 bp Feature: gene Location: 16940-18814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17240-17945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17240-17945 bp Feature: domain Description: GIIM Note: maturase Location: 18059-18227 bp Feature: domain Description: GIIM Note: maturase Location: 18059-18227 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), GIIM (pfam08388)

Seq: NFDA01000041.1 Bacillus thuringiensis serovar londrina strain BGSC 4BF1 4BF1_contig000041, whole genome shotgun sequence (21287 bp)
Overview 1 RT 1: 11203-20469 bp Neighborhood of RT #1 [11203, 21056] RVT-GII RVT-GII Intron_maturas2 HNHc RVT-GII GIIM Feature: gene Location: 11203-11673 bp Feature: gene Location: 11691-12965 bp Feature: gene Location: 13677-15465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13974-14151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13974 -14 151 bp Feature: gene Location: 15531-15800 bp Feature: gene Location: 16386-18203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16656-17481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16656-174 81 bp Feature: domain Description: Intron_maturas2 Location: 17562-17853 bp Feature: domain Description: Intron_maturas2 Location: 17562-17853 bp Feature: domain Description: HNHc Note: nucleases Location: 18000-18177 bp Feature: domain Description: HNHc Note: nucleases Location: 18000-18177 bp Feature: gene Location: 18304-18510 bp Feature: gene Location: 19182-21056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19482-20187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 194 82-20187 bp Feature: domain Description: GIIM Note: maturase Location: 20301-20469 bp Feature: domain Description: GIIM Note: maturase Location: 20301-204 69 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), GIIM (pfam08388)

Seq: NFDA01000013.1 Bacillus thuringiensis serovar londrina strain BGSC 4BF1 4BF1_contig000013, whole genome shotgun sequence (6798 bp)
Overview 1 RT 1: 117-6798 bp Neighborhood of RT #1 [117, 6798] RVT-GII Intron_maturas2 HNHc CwlT_like Feature: gene Location: 117-1940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 381-1215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 381-1215 bp Feature: domain Description: Intron_maturas2 Location: 1284-1623 bp Feature: domain Description: Intron_maturas2 Location: 1284-1623 bp Feature: domain Description: HNHc Note: nucleases Location: 1761-1917 bp Feature: domain Description: HNHc Note: nucleases Location: 1761-1917 bp Feature: gene Location: 2516-3817 bp Feature: domain Description: CwlT_like Location: 3365-3806 bp Feature: domain Description: CwlT_like Location: 3365 -3806 bp Feature: gene Location: 3814-6798 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), CwlT_like

Seq: NFDA01000012.1 Bacillus thuringiensis serovar londrina strain BGSC 4BF1 4BF1_contig000012, whole genome shotgun sequence (6801 bp)
Overview 1 RT 1: 117-6801 bp Neighborhood of RT #1 [117, 6801] RVT-GII Intron_maturas2 HNHc CwlT_like Feature: gene Location: 117-1940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 381-1215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 381-1215 bp Feature: domain Description: Intron_maturas2 Location: 1284-1623 bp Feature: domain Description: Intron_maturas2 Location: 1284-16 23 bp Feature: domain Description: HNHc Note: nucleases Location: 1761-1917 bp Feature: domain Description: HNHc Note: nucleases Location: 176 1-1917 bp Feature: gene Location: 2516-3820 bp Feature: domain Description: CwlT_like Location: 3368-3809 bp Feature: domain Description: CwlT_like Location: 336 8-3809 bp Feature: gene Location: 3817-6801 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), CwlT_like

Seq: NFDA01000051.1 Bacillus thuringiensis serovar londrina strain BGSC 4BF1 4BF1_contig000051, whole genome shotgun sequence (22582 bp)
Overview 1 RT 1: 14075-21935 bp Neighborhood of RT #1 [14075, 21961] rSAM_yydG TraG-D_C Ftsk_gamma Ftsk_gamma RVT-GII GIIM RVT-GII Intron_maturas2 HNHc Feature: gene Location: 14075-15007 bp Feature: domain Description: rSAM_yydG Location: 14099-14960 bp Feature: domain Description: rSAM_yydG Location: 14099-14960 bp Feature: gene Location: 15190-17139 bp Feature: domain Description: TraG-D_C Location: 15283-15601 bp Feature: domain Description: TraG-D_C Location: 15283-15601 bp Feature: domain Description: Ftsk_gamma Location: 16006-16186 bp Feature: domain Description: Ftsk_gamma Location: 16006-16186 bp Feature: domain Description: Ftsk_gamma Location: 16339-16480 bp Feature: domain Description: Ftsk_gamma Location: 16339-16480 bp Feature: gene Location: 17291-19165 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17591-18296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17 591-18296 bp Feature: domain Description: GIIM Note: maturase Location: 18410-18578 bp Feature: domain Description: GIIM Note: maturase Location: 18410-1857 8 bp Feature: gene Location: 19837-20043 bp Feature: gene Location: 20144-21961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20414-21239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20414-21239 bp Feature: domain Description: Intron_maturas2 Location: 21320-21611 bp Feature: domain Description: Intron_maturas2 Location: 21320-21611 bp Feature: domain Description: HNHc Note: nucleases Location: 21758-21935 bp Feature: domain Description: HNHc Note: nucleases Location: 217 58-21935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rSAM_yydG (TIGR04078), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), RVT-GII, GIIM (pfam08388), Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDA01000069.1 Bacillus thuringiensis serovar londrina strain BGSC 4BF1 4BF1_contig000069, whole genome shotgun sequence (26948 bp)
Overview 1 RT 1: 18740-26301 bp Neighborhood of RT #1 [18740, 26327] rpsA TraG-D_C Ftsk_gamma RVT-GII GIIM RVT-GII Intron_maturas2 HNHc Feature: gene Location: 18740-19723 bp Feature: domain Description: rpsA Location: 19007-19544 bp Feature: domain Description: rpsA Location: 19007-19544 bp Feature: gene Location: 19982-21424 bp Feature: domain Description: TraG-D_C Location: 19994-20312 bp Feature: domain Description: TraG-D_C Location: 19994-20312 bp Feature: domain Description: Ftsk_gamma Location: 20747-20891 bp Feature: domain Description: Ftsk_gamma Location: 20747-208 91 bp Feature: gene Location: 21657-23531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21957-22662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21957-22662 bp Feature: domain Description: GIIM Note: maturase Location: 22776-22944 bp Feature: domain Description: GIIM Note: maturase Location: 22776-22944 bp Feature: gene Location: 24203-24409 bp Feature: gene Location: 24510-26327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24780-25605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2478 0-25605 bp Feature: domain Description: Intron_maturas2 Location: 25686-25977 bp Feature: domain Description: Intron_maturas2 Location: 2568 6-25977 bp Feature: domain Description: HNHc Note: nucleases Location: 26124-26301 bp Feature: domain Description: HNHc Note: nucleases Location: 26124-26301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpsA (TIGR00717), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), RVT-GII, GIIM (pfam08388), Intron_maturas2 (pfam01348), HNHc (smart00507)