myRT

myRT report for GCA_002147155.1_ASM214715v1

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Seq: NFDV01000112.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000112, whole genome shotgun sequence (20335 bp)
Overview 1 RT 1: 117-4185 bp Neighborhood of RT #1 [117, 4229] RVT-GII Intron_maturas2 HNHc glpT MarR Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1 284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1 422-1 71 3 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 1 845-2004 bp Feature: gene Location: 2638-3501 bp Feature: domain Description: glpT Location: 2656-3502 bp Feature: domain Description: glpT Location: 2656-3502 bp Feature: gene Location: 3771-4229 bp Feature: domain Description: MarR Location: 3831-4185 bp Feature: domain Description: MarR Location: 3831 -41 85 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), glpT (TIGR00712), MarR (pfam01047)

Seq: NFDV01000204.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000204, whole genome shotgun sequence (91528 bp)
Overview 1 RT 1: 86943-90895 bp Neighborhood of RT #1 [86943, 90948] zf-HC2 DUF4179 DUF2812 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 86943-87920 bp Feature: domain Description: zf-HC2 Location: 86976-87051 bp Feature: domain Description: zf-HC2 Location: 86976-87051 bp Feature: domain Description: DUF4179 Location: 87255-87546 bp Feature: domain Description: DUF4179 Location: 872 55-87546 bp Feature: gene Location: 88297-88848 bp Feature: domain Description: DUF2812 Location: 88300-88594 bp Feature: domain Description: DUF2 812 Location: 88300-88594 bp Feature: gene Location: 89008-90948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89338-90175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89338-90175 bp Feature: domain Description: Intron_maturas2 Location: 90313-90604 bp Feature: domain Description: Intron_maturas2 Location: 90313-90604 bp Feature: domain Description: HNHc Note: nucleases Location: 90736-90895 bp Feature: domain Description: HNHc Note: nucleases Location: 90736-90895 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT zf-HC2 (pfam13490), DUF4179 (pfam13786), DUF2812 (pfam11193), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDV01000296.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000296, whole genome shotgun sequence (16707 bp)
Overview 1 RT 1: 117-5144 bp Neighborhood of RT #1 [117, 5176] RVT-GII Intron_maturas2 HNHc Tar CPBP Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: gene Location: 2638-3720 bp Feature: domain Description: Tar Location: 3010-3721 bp Feature: domain Description: Tar Location: 3 010-3 721 bp Feature: gene Location: 4691-5176 bp Feature: domain Description: CPBP Location: 4838-5144 bp Feature: domain Description: CPBP Location: 483 8-5144 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Tar (COG0840), CPBP

Seq: NFDV01000114.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000114, whole genome shotgun sequence (10816 bp)
Overview 1 RT 1: 117-5142 bp Neighborhood of RT #1 [117, 5693] RVT-GII Intron_maturas2 HNHc CetZ_tubulin-like CetZ_tubulin-like Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 4 7-1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 14 22-1713 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 184 5-2004 bp Feature: gene Location: 3812-4234 bp Feature: gene Location: 4239-5693 bp Feature: domain Description: CetZ_tubulin-like Location: 4278-4656 bp Feature: domain Description: CetZ_tubulin-like Location: 4 278-4 656 bp Feature: domain Description: CetZ_tubulin-like Location: 4788-5142 bp Feature: domain Description: CetZ_tubulin-like Location: 4 788-514 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), CetZ_tubulin-like (cd02202)

Seq: NFDV01000226.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000226, whole genome shotgun sequence (51118 bp)
Overview 1 RT 1: 46482-50485 bp Neighborhood of RT #1 [46482, 50538] HTH_MerR-like_sg1 UbiE DUF4879 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 46482-47705 bp Feature: domain Description: HTH_MerR-like_sg1 Location: 46485-46797 bp Feature: domain Description: HTH_MerR-like_sg1 Location: 46485 -46797 bp Feature: domain Description: UbiE Location: 47142-47412 bp Feature: domain Description: UbiE Location: 47142-47412 bp Feature: gene Location: 48212-48481 bp Feature: domain Description: DUF4879 Location: 48227-48476 bp Feature: domain Description: DUF4879 Location: 48227-48476 bp Feature: gene Location: 48598-50538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48928-49765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48928-49765 bp Feature: domain Description: Intron_maturas2 Location: 49903-50194 bp Feature: domain Description: Intron_maturas2 Location: 49903-5 0194 bp Feature: domain Description: HNHc Note: nucleases Location: 50326-50485 bp Feature: domain Description: HNHc Note: nucleases Location: 5 0326-5 0485 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_MerR-like_sg1 (cd04777), UbiE (COG2226), DUF4879 (pfam16219), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDV01000110.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000110, whole genome shotgun sequence (55330 bp)
Overview 1 RT 1: 117-5370 bp Neighborhood of RT #1 [117, 5399] RVT-GII Intron_maturas2 HNHc PRK12896 CcmA Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: gene Location: 3545-4291 bp Feature: domain Description: PRK12896 Location: 3548-4286 bp Feature: domain Description: PRK12896 Location: 3548-4286 bp Feature: gene Location: 4497-5399 bp Feature: domain Description: CcmA Location: 4500-5370 bp Feature: domain Description: CcmA Location: 4500-5370 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK12896 (methionine aminopeptidase; Reviewed), CcmA (COG4133)

Seq: NFDV01000295.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000295, whole genome shotgun sequence (23355 bp)
Overview 1 RT 1: 117-3878 bp Neighborhood of RT #1 [117, 3904] RVT-GII Intron_maturas2 HNHc ThiF InsQ Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447 -1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1422-17 13 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: gene Location: 2644-3120 bp Feature: domain Description: ThiF Location: 2995-3121 bp Feature: domain Description: ThiF Location: 2995-3121 bp Feature: gene Location: 3350-3904 bp Feature: domain Description: InsQ Location: 3398-3878 bp Feature: domain Description: InsQ Location: 3398-387 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), ThiF (pfam00899), InsQ (COG0675)

Seq: NFDV01000212.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000212, whole genome shotgun sequence (7049 bp)
Overview 1 RT 1: 2184-6416 bp Neighborhood of RT #1 [2184, 6469] Replic_Relax RVT-GII Intron_maturas2 HNHc Feature: gene Location: 2184-2498 bp Feature: gene Location: 2606-3883 bp Feature: domain Description: Replic_Relax Location: 2690-3236 bp Feature: domain Description: Replic_Relax Location: 2690-3236 bp Feature: gene Location: 4529-6469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4859-5696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48 59-5696 bp Feature: domain Description: Intron_maturas2 Location: 5834-6125 bp Feature: domain Description: Intron_maturas2 Location: 58 34-6125 bp Feature: domain Description: HNHc Note: nucleases Location: 6257-6416 bp Feature: domain Description: HNHc Note: nucleases Location: 6257-6416 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Replic_Relax (pfam13814), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDV01000231.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000231, whole genome shotgun sequence (9867 bp)
Overview 1 RT 1: 4636-9698 bp Neighborhood of RT #1 [4636, 9751] HTH_XRE RVT-GII Intron_maturas2 HNHc Feature: gene Location: 4636-5781 bp Feature: gene Location: 6220-6564 bp Feature: domain Description: HTH_XRE Location: 6235-6406 bp Feature: domain Description: HTH_XRE Location: 6235-6406 bp Feature: gene Location: 7811-9751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8141-8978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8141-89 78 bp Feature: domain Description: Intron_maturas2 Location: 9116-9407 bp Feature: domain Description: Intron_maturas2 Location: 9 116-9 407 bp Feature: domain Description: HNHc Note: nucleases Location: 9539-9698 bp Feature: domain Description: HNHc Note: nucleases Location: 9 539 -9 69 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDV01000292.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000292, whole genome shotgun sequence (18656 bp)
Overview 1 RT 1: 135-8655 bp Neighborhood of RT #1 [135, 8655] DUF3854 RVT-GII HNHc LPD1 RVT-GII HNHc Feature: gene Location: 135-629 bp Feature: domain Description: DUF3854 Location: 258-600 bp Feature: domain Description: DUF3854 Location: 258-600 bp Feature: gene Location: 753-2585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1065-1764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10 65-1764 bp Feature: domain Description: HNHc Note: nucleases Location: 2304-2469 bp Feature: domain Description: HNHc Note: nucleases Location: 2304-2469 bp Feature: gene Location: 3358-4188 bp Feature: gene Location: 4178-4975 bp Feature: domain Description: LPD1 Location: 4724-4919 bp Feature: domain Description: LPD1 Location: 4724-4919 bp Feature: gene Location: 5047-6843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5341-6037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5341-6037 bp Feature: domain Description: HNHc Note: nucleases Location: 6637-6712 bp Feature: domain Description: HNHc Note: nucleases Location: 6637-6712 bp Feature: gene Location: 6875-7129 bp Feature: gene Location: 7564-8655 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LPD1 (pfam18796), RVT-GII, HNHc (smart00507)

Seq: NFDV01000281.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000281, whole genome shotgun sequence (9432 bp)
Overview 1 RT 1: 655-5266 bp Neighborhood of RT #1 [655, 5445] RVT-GII GIIM HNHc TraG-D_C Ftsk_gamma rpsA Feature: gene Location: 655-2529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 955-1660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 955-1660 bp Feature: domain Description: GIIM Note: maturase Location: 1774-1942 bp Feature: domain Description: GIIM Note: maturase Location: 1774-1942 bp Feature: domain Description: HNHc Note: nucleases Location: 2290-2455 bp Feature: domain Description: HNHc Note: nucleases Location: 2290-2455 bp Feature: gene Location: 2762-4204 bp Feature: domain Description: TraG-D_C Location: 2774-3092 bp Feature: domain Description: TraG-D_C Location: 2774-3092 bp Feature: domain Description: Ftsk_gamma Location: 3527-3686 bp Feature: domain Description: Ftsk_gamma Location: 3527-3686 bp Feature: gene Location: 4462-5445 bp Feature: domain Description: rpsA Location: 4729-5266 bp Feature: domain Description: rpsA Location: 4729-5266 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), Ftsk_gamma (smart00843), rpsA (TIGR00717), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NFDV01000215.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000215, whole genome shotgun sequence (5455 bp)
Overview 1 RT 1: 2146-5208 bp Neighborhood of RT #1 [2146, 5455] RVT-GII Feature: gene Location: 2146-2346 bp Feature: gene Location: 2364-3509 bp Feature: gene Location: 4110-5455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4380-5208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4380-5208 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NFDV01000115.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000115, whole genome shotgun sequence (48845 bp)
Overview 1 RT 1: 117-3471 bp Neighborhood of RT #1 [117, 3515] RVT-GII Intron_maturas2 HNHc NIPSNAP RimL Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: gene Location: 2626-2946 bp Feature: domain Description: NIPSNAP Location: 2650-2854 bp Feature: domain Description: NIPSNAP Location: 2650-2854 bp Feature: gene Location: 2919-3515 bp Feature: domain Description: RimL Location: 3174-3471 bp Feature: domain Description: RimL Location: 3174-3471 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), NIPSNAP (pfam07978), RimL (COG1670)

Seq: NFDV01000280.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000280, whole genome shotgun sequence (18631 bp)
Overview 1 RT 1: 655-5594 bp 2 RT 2: 15410-18462 bp Neighborhood of RT #1 [655, 5594] RVT-GII GIIM HNHc TraG-D_C Ftsk_gamma Neighborhood of RT #2 [15410, 18515] E1_enzyme_family RVT-GII Intron_maturas2 HNHc Feature: gene Location: 655-2529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 955-1660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 955-1660 bp Feature: domain Description: GIIM Note: maturase Location: 1774-1942 bp Feature: domain Description: GIIM Note: maturase Location: 1774-1942 bp Feature: domain Description: HNHc Note: nucleases Location: 2290-2455 bp Feature: domain Description: HNHc Note: nucleases Location: 2290-2455 bp Feature: gene Location: 2681-4552 bp Feature: domain Description: TraG-D_C Location: 2774-3089 bp Feature: domain Description: TraG-D_C Location: 2774-3089 bp Feature: domain Description: Ftsk_gamma Location: 3497-3677 bp Feature: domain Description: Ftsk_gamma Location: 3497-3677 bp Feature: gene Location: 4824-5594 bp Feature: gene Location: 15410-15811 bp Feature: gene Location: 15824-16006 bp Feature: domain Description: E1_enzyme_family Location: 15872-15989 bp Feature: domain Description: E1_enzyme_family Location: 15872-15989 bp Feature: gene Location: 16575-18515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16905-17742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16905-17742 bp Feature: domain Description: Intron_maturas2 Location: 17880-18171 bp Feature: domain Description: Intron_maturas2 Location: 17880-18171 bp Feature: domain Description: HNHc Note: nucleases Location: 18303-18462 bp Feature: domain Description: HNHc Note: nucleases Location: 18303-18462 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), Ftsk_gamma (smart00843), RVT-GII, GIIM (pfam08388), HNHc (smart00507), E1_enzyme_family (cl22428), Intron_maturas2 (pfam01348)

Seq: NFDV01000294.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000294, whole genome shotgun sequence (15912 bp)
Overview 1 RT 1: 10804-15279 bp Neighborhood of RT #1 [10804, 15332] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 10804-10995 bp Feature: gene Location: 11476-13275 bp Feature: gene Location: 13392-15332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13722-14559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13722-14559 bp Feature: domain Description: Intron_maturas2 Location: 14697-14988 bp Feature: domain Description: Intron_maturas2 Location: 14697-14988 bp Feature: domain Description: HNHc Note: nucleases Location: 15120-15279 bp Feature: domain Description: HNHc Note: nucleases Location: 15 120-15 279 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDV01000282.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000282, whole genome shotgun sequence (39699 bp)
Overview 1 RT 1: 35953-39066 bp Neighborhood of RT #1 [35953, 39119] EFh_HEF_SCGN RVT-GII Intron_maturas2 HNHc Feature: gene Location: 35953-36069 bp Feature: gene Location: 36535-37017 bp Feature: domain Description: EFh_HEF_SCGN Location: 36613-36868 bp Feature: domain Description: EFh_HEF_SCGN Location: 36613-36868 bp Feature: gene Location: 37179-39119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37509-38346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37509-38346 bp Feature: domain Description: Intron_maturas2 Location: 38484-38775 bp Feature: domain Description: Intron_maturas2 Location: 38484-38775 bp Feature: domain Description: HNHc Note: nucleases Location: 38907-39066 bp Feature: domain Description: HNHc Note: nucleases Location: 38907-39066 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EFh_HEF_SCGN (cd16178), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDV01000108.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000108, whole genome shotgun sequence (7404 bp)
Overview 1 RT 1: 117-3645 bp Neighborhood of RT #1 [117, 3645] RVT-GII Intron_maturas2 HNHc NO_synthase Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1422-17 13 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: gene Location: 2542-3426 bp Feature: domain Description: NO_synthase Location: 2554-3331 bp Feature: domain Description: NO_synthase Location: 2554-3331 bp Feature: gene Location: 3459-3645 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), NO_synthase (pfam02898)

Seq: NFDV01000113.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000113, whole genome shotgun sequence (44129 bp)
Overview 1 RT 1: 117-4394 bp Neighborhood of RT #1 [117, 4555] RVT-GII Intron_maturas2 HNHc MFS_MefA_like AcrR Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 18 45-2004 bp Feature: gene Location: 2626-3873 bp Feature: domain Description: MFS_MefA_like Location: 2680-3853 bp Feature: domain Description: MFS_MefA_like Location: 2680-3853 bp Feature: gene Location: 3920-4555 bp Feature: domain Description: AcrR Location: 3944-4394 bp Feature: domain Description: AcrR Location: 3944-4394 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), MFS_MefA_like (cd06173), AcrR (COG1309)

Seq: NFDV01000276.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000276, whole genome shotgun sequence (14792 bp)
Overview 1 RT 1: 1039-10463 bp Neighborhood of RT #1 [1039, 10463] TrbL CwlT_like RVT-GII HNHc Feature: gene Location: 1039-5058 bp Feature: domain Description: TrbL Location: 1318-1816 bp Feature: domain Description: TrbL Location: 1318-1816 bp Feature: gene Location: 5055-6050 bp Feature: domain Description: CwlT_like Location: 5904-6027 bp Feature: domain Description: CwlT_like Location: 5904-6027 bp Feature: gene Location: 6724-8529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7018-7714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7018-7714 bp Feature: domain Description: HNHc Note: nucleases Location: 8275-8413 bp Feature: domain Description: HNHc Note: nucleases Location: 8275-8413 bp Feature: gene Location: 8580-9871 bp Feature: gene Location: 9888-10463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TrbL (pfam04610), CwlT_like, RVT-GII, HNHc (smart00507)

Seq: NFDV01000092.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000092, whole genome shotgun sequence (24497 bp)
Overview 1 RT 1: 18609-23864 bp Neighborhood of RT #1 [18609, 23917] DUF3959 pPIWI_RE_X MID_pPIWI_RE RNaseH_pPIWI_RE RVT-GII Intron_maturas2 HNHc Feature: gene Location: 18609-19376 bp Feature: domain Description: DUF3959 Location: 18636-19362 bp Feature: domain Description: DUF3959 Location: 18636-19362 bp Feature: gene Location: 19584-21866 bp Feature: domain Description: pPIWI_RE_X Location: 19611-20535 bp Feature: domain Description: pPIWI_RE_X Location: 19611-20 535 bp Feature: domain Description: MID_pPIWI_RE Location: 20733-21045 bp Feature: domain Description: MID_pPIWI_RE Location: 20 733-21045 bp Feature: domain Description: RNaseH_pPIWI_RE Location: 21111-21774 bp Feature: domain Description: RNaseH_pPIWI_RE Location: 21111-21774 bp Feature: gene Location: 21977-23917 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22307-23144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22307-23144 bp Feature: domain Description: Intron_maturas2 Location: 23282-23573 bp Feature: domain Description: Intron_maturas2 Location: 23282-23573 bp Feature: domain Description: HNHc Note: nucleases Location: 23705-23864 bp Feature: domain Description: HNHc Note: nucleases Location: 23705-23864 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3959 (pfam13105), pPIWI_RE_X, MID_pPIWI_RE (pfam18157), RNaseH_pPIWI_RE, RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDV01000129.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000129, whole genome shotgun sequence (41912 bp)
Overview 1 RT 1: 12490-17096 bp Neighborhood of RT #1 [12490, 17143] RVT-GII HNHc PRK03113 Feature: gene Location: 12490-12690 bp Feature: gene Location: 12766-13002 bp Feature: gene Location: 13788-15695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14088-14799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14088-14799 bp Feature: domain Description: HNHc Note: nucleases Location: 15390-15540 bp Feature: domain Description: HNHc Note: nucleases Location: 15390-15540 bp Feature: gene Location: 15917-16672 bp Feature: gene Location: 16706-17143 bp Feature: domain Description: PRK03113 Location: 16724-17096 bp Feature: domain Description: PRK03113 Location: 16724-17096 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), PRK03113 (putative disulfide oxidoreductase; Provisional)

Seq: NFDV01000257.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000257, whole genome shotgun sequence (8986 bp)
Overview 1 RT 1: 1-8678 bp Neighborhood of RT #1 [1, 8752] RVT-GII HNHc RVT-GII Intron_maturas2 HNHc RVT-GII GIIM HNHc Feature: gene Location: 1-397 bp Feature: gene Location: 1364-3154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1661-2357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1661-2357 bp Feature: domain Description: HNHc Note: nucleases Location: 2897-3029 bp Feature: domain Description: HNHc Note: nucleases Location: 2897-3029 bp Feature: gene Location: 3220-3489 bp Feature: gene Location: 4081-5898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4351-5173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4351-5173 bp Feature: domain Description: Intron_maturas2 Location: 5254-5548 bp Feature: domain Description: Intron_maturas2 Location: 5254-5548 bp Feature: domain Description: HNHc Note: nucleases Location: 5695-5869 bp Feature: domain Description: HNHc Note: nucleases Location: 5695-5869 bp Feature: gene Location: 5999-6205 bp Feature: gene Location: 6878-8752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7178-7883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7178-7883 bp Feature: domain Description: GIIM Note: maturase Location: 7997-8165 bp Feature: domain Description: GIIM Note: maturase Location: 7997-8165 bp Feature: domain Description: HNHc Note: nucleases Location: 8513-8678 bp Feature: domain Description: HNHc Note: nucleases Location: 8513-8678 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Intron_maturas2 (pfam01348), GIIM (pfam08388)

Seq: NFDV01000232.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000232, whole genome shotgun sequence (3987 bp)
Overview 1 RT 1: 445-3818 bp Neighborhood of RT #1 [445, 3871] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 445-930 bp Feature: gene Location: 1931-3871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2261-3098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2261-3098 bp Feature: domain Description: Intron_maturas2 Location: 3236-3527 bp Feature: domain Description: Intron_maturas2 Location: 323 6-3527 bp Feature: domain Description: HNHc Note: nucleases Location: 3659-3818 bp Feature: domain Description: HNHc Note: nucleases Location: 3659-3818 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDV01000297.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000297, whole genome shotgun sequence (12095 bp)
Overview 1 RT 1: 117-3655 bp Neighborhood of RT #1 [117, 3655] RVT-GII Intron_maturas2 HNHc FtsK_SpoIIIE Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: gene Location: 2626-3357 bp Feature: domain Description: FtsK_SpoIIIE Location: 3004-3334 bp Feature: domain Description: FtsK_SpoIIIE Location: 3004-3334 bp Feature: gene Location: 3473-3655 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), FtsK_SpoIIIE (pfam01580)

Seq: NFDV01000284.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000284, whole genome shotgun sequence (43978 bp)
Overview 1 RT 1: 25347-32576 bp 2 RT 2: 39485-43809 bp Neighborhood of RT #1 [25347, 32576] RVT-GII GIIM KOG1000 KOG1000 Neighborhood of RT #2 [39485, 43862] LolD LolE RVT-GII Intron_maturas2 HNHc Feature: gene Location: 25347-25574 bp Feature: gene Location: 25646-26539 bp Feature: gene Location: 27301-29166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27601-28306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27601-28306 bp Feature: domain Description: GIIM Note: maturase Location: 28393-28576 bp Feature: domain Description: GIIM Note: maturase Location: 28393-28576 bp Feature: gene Location: 29441-31846 bp Feature: domain Description: KOG1000 Location: 30152-30368 bp Feature: domain Description: KOG1000 Location: 30152-30368 bp Feature: domain Description: KOG1000 Location: 30971-31304 bp Feature: domain Description: KOG1000 Location: 30971-31304 bp Feature: gene Location: 31863-32576 bp Feature: gene Location: 39485-40237 bp Feature: domain Description: LolD Location: 39500-40166 bp Feature: domain Description: LolD Location: 39500-40166 bp Feature: gene Location: 40245-41396 bp Feature: domain Description: LolE Location: 40257-41343 bp Feature: domain Description: LolE Location: 4025 7-41343 bp Feature: gene Location: 41922-43862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42252-43089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4225 2-43089 bp Feature: domain Description: Intron_maturas2 Location: 43227-43518 bp Feature: domain Description: Intron_maturas2 Location: 43227-43518 bp Feature: domain Description: HNHc Note: nucleases Location: 43650-43809 bp Feature: domain Description: HNHc Note: nucleases Location: 43650-43809 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), LolD (COG1136), LolE (COG4591), Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDV01000182.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000182, whole genome shotgun sequence (14216 bp)
Overview 1 RT 1: 9892-14047 bp Neighborhood of RT #1 [9892, 14100] thiol_BshB2 PRK06172 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 9892-10554 bp Feature: domain Description: thiol_BshB2 Location: 9901-10549 bp Feature: domain Description: thiol_BshB2 Location: 9901-10549 bp Feature: gene Location: 10667-11410 bp Feature: domain Description: PRK06172 Location: 10670-11405 bp Feature: domain Description: PRK06172 Location: 10670-11405 bp Feature: gene Location: 12160-14100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12490-13327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12490-13327 bp Feature: domain Description: Intron_maturas2 Location: 13465-13756 bp Feature: domain Description: Intron_maturas2 Location: 13465-13756 bp Feature: domain Description: HNHc Note: nucleases Location: 13888-14047 bp Feature: domain Description: HNHc Note: nucleases Location: 13888-14047 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06172 (SDR family oxidoreductase), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), thiol_BshB2 (TIGR04000)

Seq: NFDV01000109.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000109, whole genome shotgun sequence (42603 bp)
Overview 1 RT 1: 117-3137 bp Neighborhood of RT #1 [117, 3151] RVT-GII Intron_maturas2 HNHc Tautomerase_2 YurZ Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: gene Location: 2639-2839 bp Feature: domain Description: Tautomerase_2 Location: 2642-2795 bp Feature: domain Description: Tautomerase_2 Location: 2642-27 95 bp Feature: gene Location: 2843-3151 bp Feature: domain Description: YurZ Location: 2858-3137 bp Feature: domain Description: YurZ Location: 2858-3137 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Tautomerase_2 (pfam14552), YurZ (COG0599)

Seq: NFDV01000222.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000222, whole genome shotgun sequence (4939 bp)
Overview 1 RT 1: 1-4770 bp Neighborhood of RT #1 [1, 4823] Chondroitinas_B Bacillus_HBL RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1-398 bp Feature: domain Description: Chondroitinas_B Location: 199-370 bp Feature: domain Description: Chondroitinas_B Location: 199-370 bp Feature: gene Location: 1766-2302 bp Feature: domain Description: Bacillus_HBL Location: 1883-2300 bp Feature: domain Description: Bacillus_HBL Location: 1883-2300 bp Feature: gene Location: 2883-4823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3213-4050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3213-4050 bp Feature: domain Description: Intron_maturas2 Location: 4188-4479 bp Feature: domain Description: Intron_maturas2 Location: 4188-4479 bp Feature: domain Description: HNHc Note: nucleases Location: 4611-4770 bp Feature: domain Description: HNHc Note: nucleases Location: 4611-4770 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Chondroitinas_B (pfam14592), Bacillus_HBL (pfam05791), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDV01000122.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000122, whole genome shotgun sequence (49575 bp)
Overview 1 RT 1: 581-4829 bp Neighborhood of RT #1 [581, 4831] RVT-GII Intron_maturas2 HNHc AcoR Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2745-2858 bp Feature: gene Location: 2981-4831 bp Feature: domain Description: AcoR Location: 3005-4829 bp Feature: domain Description: AcoR Location: 3005-4829 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcoR (COG3284), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDV01000117.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000117, whole genome shotgun sequence (163416 bp)
Overview 1 RT 1: 117-3730 bp 2 RT 2: 158269-162783 bp Neighborhood of RT #1 [117, 3738] RVT-GII Intron_maturas2 HNHc MPP_YhcR_N DUF3886 Neighborhood of RT #2 [158269, 162836] PRK13670 Arm-DNA-bind_4 Phage_int_SAM_3 INT_ICEBs1_C_like RVT-GII Intron_maturas2 HNHc Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: gene Location: 2638-3273 bp Feature: domain Description: MPP_YhcR_N Location: 2752-3274 bp Feature: domain Description: MPP_YhcR_N Location: 2752-3274 bp Feature: gene Location: 3475-3738 bp Feature: domain Description: DUF3886 Location: 3532-3730 bp Feature: domain Description: DUF3886 Location: 3532-3730 bp Feature: gene Location: 158269-159495 bp Feature: domain Description: PRK13670 Location: 158272-159466 bp Feature: domain Description: PRK13670 Location: 158272-159466 bp Feature: gene Location: 159645-160775 bp Feature: domain Description: Arm-DNA-bind_4 Location: 159675-159807 bp Feature: domain Description: Arm-DNA-bind_4 Location: 159675-159807 bp Feature: domain Description: Phage_int_SAM_3 Location: 159834-160002 bp Feature: domain Description: Phage_int_SAM_3 Location: 159834-160002 bp Feature: domain Description: INT_ICEBs1_C_like Location: 160161-160668 bp Feature: domain Description: INT_ICEBs1_C_like Location: 160161-160668 bp Feature: gene Location: 160896-162836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 161226-162063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 161226-162063 bp Feature: domain Description: Intron_maturas2 Location: 162201-162492 bp Feature: domain Description: Intron_maturas2 Location: 162201-162492 bp Feature: domain Description: HNHc Note: nucleases Location: 162624-162783 bp Feature: domain Description: HNHc Note: nucleases Location: 162624-162783 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), MPP_YhcR_N (cd07412), DUF3886 (pfam13025), PRK13670 (nucleotidyltransferase), Arm-DNA-bind_4 (pfam14657), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189)

Seq: NFDV01000195.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000195, whole genome shotgun sequence (78976 bp)
Overview 1 RT 1: 75610-78343 bp Neighborhood of RT #1 [75610, 78396] DUF4027 glpT RVT-GII Intron_maturas2 HNHc Feature: gene Location: 75610-75735 bp Feature: domain Description: DUF4027 Location: 75622-75727 bp Feature: domain Description: DUF4027 Location: 75622-75727 bp Feature: gene Location: 75854-76351 bp Feature: domain Description: glpT Location: 75872-76343 bp Feature: domain Description: glpT Location: 75872-76343 bp Feature: gene Location: 76456-78396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76786-77623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76786-77623 bp Feature: domain Description: Intron_maturas2 Location: 77761-78052 bp Feature: domain Description: Intron_maturas2 Location: 77761-78052 bp Feature: domain Description: HNHc Note: nucleases Location: 78184-78343 bp Feature: domain Description: HNHc Note: nucleases Location: 78184-78343 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4027 (pfam13219), glpT (TIGR00712), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDV01000240.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000240, whole genome shotgun sequence (39873 bp)
Overview 1 RT 1: 36140-39240 bp Neighborhood of RT #1 [36140, 39293] DnaD_dom RVT-GII Intron_maturas2 HNHc Feature: gene Location: 36140-36922 bp Feature: domain Description: DnaD_dom Location: 36668-36851 bp Feature: domain Description: DnaD_dom Location: 36668-36851 bp Feature: gene Location: 37012-37138 bp Feature: gene Location: 37353-39293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37683-38520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37683-38520 bp Feature: domain Description: Intron_maturas2 Location: 38658-38949 bp Feature: domain Description: Intron_maturas2 Location: 38658-38949 bp Feature: domain Description: HNHc Note: nucleases Location: 39081-39240 bp Feature: domain Description: HNHc Note: nucleases Location: 39081-39240 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DnaD_dom (TIGR01446), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDV01000128.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000128, whole genome shotgun sequence (4654 bp)
Overview 1 RT 1: 56-4021 bp Neighborhood of RT #1 [56, 4074] HTH_28 HTH_28 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 56-1410 bp Feature: domain Description: HTH_28 Location: 80-218 bp Feature: domain Description: HTH_28 Location: 80-218 bp Feature: domain Description: HTH_28 Location: 245-404 bp Feature: domain Description: HTH_28 Location: 245-404 bp Feature: gene Location: 1444-2001 bp Feature: gene Location: 2134-4074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2464-3301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2464-33 01 bp Feature: domain Description: Intron_maturas2 Location: 3439-3730 bp Feature: domain Description: Intron_maturas2 Location: 3439-3730 bp Feature: domain Description: HNHc Note: nucleases Location: 3862-4021 bp Feature: domain Description: HNHc Note: nucleases Location: 3862-4021 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), HTH_28 (pfam13518)

Seq: NFDV01000291.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000291, whole genome shotgun sequence (8485 bp)
Overview 1 RT 1: 1-5045 bp Neighborhood of RT #1 [1, 5062] RVT-GII HNHc DUF3854 T_den_put_tspse Feature: gene Location: 1-792 bp Feature: gene Location: 1565-3397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1877-2576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1877-2576 bp Feature: domain Description: HNHc Note: nucleases Location: 3116-3281 bp Feature: domain Description: HNHc Note: nucleases Location: 3116-3281 bp Feature: gene Location: 3521-4015 bp Feature: domain Description: DUF3854 Location: 3644-3986 bp Feature: domain Description: DUF3854 Location: 3644-3986 bp Feature: gene Location: 4127-5062 bp Feature: domain Description: T_den_put_tspse Location: 4169-5045 bp Feature: domain Description: T_den_put_tspse Location: 4169-5045 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), T_den_put_tspse (TIGR01784)

Seq: NFDV01000225.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000225, whole genome shotgun sequence (43783 bp)
Overview 1 RT 1: 38439-43614 bp Neighborhood of RT #1 [38439, 43667] CwlA SH3_3 SLH SLH SLH RVT-GII Intron_maturas2 HNHc Feature: gene Location: 38439-38897 bp Feature: gene Location: 39704-41011 bp Feature: domain Description: CwlA Location: 39743-40235 bp Feature: domain Description: CwlA Location: 39743-40235 bp Feature: domain Description: SH3_3 Location: 40295-40421 bp Feature: domain Description: SH3_3 Location: 40295-40421 bp Feature: domain Description: SLH Location: 40493-40610 bp Feature: domain Description: SLH Location: 40493-40610 bp Feature: domain Description: SLH Location: 40655-40784 bp Feature: domain Description: SLH Location: 40655-40784 bp Feature: domain Description: SLH Location: 40847-40973 bp Feature: domain Description: SLH Location: 40847-40973 bp Feature: gene Location: 41727-43667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42057-42894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42057-42894 bp Feature: domain Description: Intron_maturas2 Location: 43032-43323 bp Feature: domain Description: Intron_maturas2 Location: 43032-43323 bp Feature: domain Description: HNHc Note: nucleases Location: 43455-43614 bp Feature: domain Description: HNHc Note: nucleases Location: 43455-43614 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CwlA (COG5632), SH3_3 (pfam08239), SLH (pfam00395), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDV01000277.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000277, whole genome shotgun sequence (11575 bp)
Overview 1 RT 1: 106-4354 bp Neighborhood of RT #1 [106, 7596] RVT-GII HNHc CwlT_like TrbL Feature: gene Location: 106-1911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 400-1096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 400-1096 bp Feature: domain Description: HNHc Note: nucleases Location: 1657-1795 bp Feature: domain Description: HNHc Note: nucleases Location: 1657-1795 bp Feature: gene Location: 2585-3580 bp Feature: domain Description: CwlT_like Location: 3434-3557 bp Feature: domain Description: CwlT_like Location: 3434-3557 bp Feature: gene Location: 3577-7596 bp Feature: domain Description: TrbL Location: 3856-4354 bp Feature: domain Description: TrbL Location: 3856-4354 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), CwlT_like, TrbL (pfam04610)

Seq: NFDV01000119.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000119, whole genome shotgun sequence (18672 bp)
Overview 1 RT 1: 581-3435 bp Neighborhood of RT #1 [581, 3440] RVT-GII Intron_maturas2 HNHc DUF4865 Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2637-2849 bp Feature: gene Location: 2892-3440 bp Feature: domain Description: DUF4865 Location: 2895-3435 bp Feature: domain Description: DUF4865 Location: 2895-3435 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4865 (pfam16157), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDV01000123.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000123, whole genome shotgun sequence (45876 bp)
Overview 1 RT 1: 581-3678 bp Neighborhood of RT #1 [581, 3678] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2638-2895 bp Feature: gene Location: 3400-3678 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDV01000118.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000118, whole genome shotgun sequence (29361 bp)
Overview 1 RT 1: 581-3720 bp Neighborhood of RT #1 [581, 3720] RVT-GII Intron_maturas2 HNHc ThiF Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2638-3258 bp Feature: domain Description: ThiF Location: 2641-3184 bp Feature: domain Description: ThiF Location: 2641-3184 bp Feature: gene Location: 3403-3720 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ThiF (pfam00899), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDV01000111.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000111, whole genome shotgun sequence (7692 bp)
Overview 1 RT 1: 117-5854 bp Neighborhood of RT #1 [117, 5854] RVT-GII Intron_maturas2 HNHc delta_endotoxin_C Endotoxin_C2 Cry1Ac_D5 Endotoxin_C2 delta_endotoxin_C Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: gene Location: 2628-5387 bp Feature: domain Description: delta_endotoxin_C Location: 2844-3888 bp Feature: domain Description: delta_endotoxin_C Location: 2844-3888 bp Feature: domain Description: Endotoxin_C2 Location: 3912-4092 bp Feature: domain Description: Endotoxin_C2 Location: 3912-40 92 bp Feature: domain Description: Cry1Ac_D5 Location: 4113-4656 bp Feature: domain Description: Cry1Ac_D5 Location: 4113-4656 bp Feature: domain Description: Endotoxin_C2 Location: 4755-4884 bp Feature: domain Description: Endotoxin_C2 Location: 4755-4884 bp Feature: domain Description: delta_endotoxin_C Location: 5268-5373 bp Feature: domain Description: delta_endotoxin_C Location: 5268-5373 bp Feature: gene Location: 5648-5854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), delta_endotoxin_C (cd04085), Endotoxin_C2 (pfam18449), Cry1Ac_D5 (pfam17997)

Seq: NFDV01000197.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000197, whole genome shotgun sequence (52976 bp)
Overview 1 RT 1: 48784-52343 bp Neighborhood of RT #1 [48784, 52396] DUF4250 RHH_3 PRK09419 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 48784-49260 bp Feature: domain Description: DUF4250 Location: 48841-48925 bp Feature: domain Description: DUF4250 Location: 48841 -48925 bp Feature: domain Description: RHH_3 Location: 49102-49231 bp Feature: domain Description: RHH_3 Location: 49102-49231 bp Feature: gene Location: 49386-50339 bp Feature: domain Description: PRK09419 Location: 49395-50334 bp Feature: domain Description: PRK0941 9 Location: 49395-50334 bp Feature: gene Location: 50456-52396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50786-51623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50786-51623 bp Feature: domain Description: Intron_maturas2 Location: 51761-52052 bp Feature: domain Description: Intron_maturas2 Location: 51761-52052 bp Feature: domain Description: HNHc Note: nucleases Location: 52184-52343 bp Feature: domain Description: HNHc Note: nucleases Location: 52184-52343 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4250 (pfam14056), RHH_3 (pfam12651), PRK09419 (multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase/5'-nucleotidase), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDV01000239.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000239, whole genome shotgun sequence (5371 bp)
Overview 1 RT 1: 38-4738 bp Neighborhood of RT #1 [38, 4791] DDE_Tnp_1 Endotoxin_N RVT-GII Intron_maturas2 HNHc Feature: gene Location: 38-1528 bp Feature: domain Description: DDE_Tnp_1 Location: 455-1253 bp Feature: domain Description: DDE_Tnp_1 Location: 455-1253 bp Feature: gene Location: 2149-2772 bp Feature: domain Description: Endotoxin_N Location: 2290-2737 bp Feature: domain Description: Endotoxin_N Location: 2290-2737 bp Feature: gene Location: 2851-4791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3181-4018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3181-4018 bp Feature: domain Description: Intron_maturas2 Location: 4156-4447 bp Feature: domain Description: Intron_maturas2 Location: 4156-4447 bp Feature: domain Description: HNHc Note: nucleases Location: 4579-4738 bp Feature: domain Description: HNHc Note: nucleases Location: 4579-4738 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Endotoxin_N (pfam03945), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DDE_Tnp_1 (pfam01609)

Seq: NFDV01000258.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000258, whole genome shotgun sequence (12103 bp)
Overview 1 RT 1: 7054-12103 bp Neighborhood of RT #1 [7054, 12103] T_den_put_tspse DUF3854 RVT-GII HNHc Feature: gene Location: 7054-7977 bp Feature: domain Description: T_den_put_tspse Location: 7096-7960 bp Feature: domain Description: T_den_put_tspse Location: 7096-7960 bp Feature: gene Location: 8089-8583 bp Feature: domain Description: DUF3854 Location: 8212-8554 bp Feature: domain Description: DUF3854 Location: 8212-8554 bp Feature: gene Location: 8707-10539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9019-9718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9019-9718 bp Feature: domain Description: HNHc Note: nucleases Location: 10258-10423 bp Feature: domain Description: HNHc Note: nucleases Location: 10258-10423 bp Feature: gene Location: 11312-12103 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T_den_put_tspse (TIGR01784), DUF3854 (pfam12965), RVT-GII, HNHc (smart00507)

Seq: NFDV01000260.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000260, whole genome shotgun sequence (5383 bp)
Overview 1 RT 1: 697-5152 bp Neighborhood of RT #1 [697, 5277] RVT-GII Intron_maturas2 HNHc RVT-GII HNHc Feature: gene Location: 697-2520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 967-1795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 967-1795 bp Feature: domain Description: Intron_maturas2 Location: 1867-2185 bp Feature: domain Description: Intron_maturas2 Location: 1867-2185 bp Feature: domain Description: HNHc Note: nucleases Location: 2338-2491 bp Feature: domain Description: HNHc Note: nucleases Location: 2338-2491 bp Feature: gene Location: 3487-5277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3784-4480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3784-44 80 bp Feature: domain Description: HNHc Note: nucleases Location: 5020-5152 bp Feature: domain Description: HNHc Note: nucleases Location: 5020-5152 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Intron_maturas2 (pfam01348)

Seq: NFDV01000120.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000120, whole genome shotgun sequence (8184 bp)
Overview 1 RT 1: 581-3656 bp Neighborhood of RT #1 [581, 3679] RVT-GII Intron_maturas2 HNHc Tar SASP Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2638-3297 bp Feature: domain Description: Tar Location: 2644-3289 bp Feature: domain Description: Tar Location: 2644-3289 bp Feature: gene Location: 3464-3679 bp Feature: domain Description: SASP Location: 3494-3656 bp Feature: domain Description: SASP Location: 3494-3656 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tar (COG0840), SASP (pfam00269), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDV01000180.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000180, whole genome shotgun sequence (31735 bp)
Overview 1 RT 1: 28075-31102 bp Neighborhood of RT #1 [28075, 31155] Replic_Relax T7_EssCb_Firm RVT-GII Intron_maturas2 HNHc Feature: gene Location: 28075-28695 bp Feature: domain Description: Replic_Relax Location: 28123-28588 bp Feature: domain Description: Replic_Relax Location: 28123-28588 bp Feature: gene Location: 28637-29098 bp Feature: domain Description: T7_EssCb_Firm Location: 28655-28955 bp Feature: domain Description: T7_EssCb_Firm Location: 28655-28955 bp Feature: gene Location: 29215-31155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29545-30382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29545-30382 bp Feature: domain Description: Intron_maturas2 Location: 30520-30811 bp Feature: domain Description: Intron_maturas2 Location: 30520-30811 bp Feature: domain Description: HNHc Note: nucleases Location: 30943-31102 bp Feature: domain Description: HNHc Note: nucleases Location: 30943-31102 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Replic_Relax (pfam13814), T7_EssCb_Firm (TIGR03928), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDV01000176.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000176, whole genome shotgun sequence (28563 bp)
Overview 1 RT 1: 24852-28394 bp Neighborhood of RT #1 [24852, 28447] Acetyltransf_8 nicotinamidase_related RVT-GII Intron_maturas2 HNHc Feature: gene Location: 24852-25388 bp Feature: domain Description: Acetyltransf_8 Location: 24894-25323 bp Feature: domain Description: Acetyltransf_8 Location: 24894-25323 bp Feature: gene Location: 25423-25938 bp Feature: domain Description: nicotinamidase_related Location: 25435-25885 bp Feature: domain Description: nicotinamidase_related Location: 25435-25885 bp Feature: gene Location: 26507-28447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26837-27674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26837-27674 bp Feature: domain Description: Intron_maturas2 Location: 27812-28103 bp Feature: domain Description: Intron_maturas2 Location: 27812-28103 bp Feature: domain Description: HNHc Note: nucleases Location: 28235-28394 bp Feature: domain Description: HNHc Note: nucleases Location: 28235-28394 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_8 (pfam13523), nicotinamidase_related (cd01014), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDV01000238.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000238, whole genome shotgun sequence (44212 bp)
Overview 1 RT 1: 40831-44043 bp Neighborhood of RT #1 [40831, 44096] PadR RVT-GII Intron_maturas2 HNHc Feature: gene Location: 40831-41076 bp Feature: gene Location: 41231-41545 bp Feature: domain Description: PadR Location: 41279-41489 bp Feature: domain Description: PadR Location: 41279-4148 9 bp Feature: gene Location: 42156-44096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42486-43323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4248 6-43323 bp Feature: domain Description: Intron_maturas2 Location: 43461-43752 bp Feature: domain Description: Intron_maturas2 Location: 43461-43752 bp Feature: domain Description: HNHc Note: nucleases Location: 43884-44043 bp Feature: domain Description: HNHc Note: nucleases Location: 43884-44043 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PadR (pfam03551), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDV01000163.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000163, whole genome shotgun sequence (11678 bp)
Overview 1 RT 1: 7787-11509 bp Neighborhood of RT #1 [7787, 11562] DegV RVT-GII Intron_maturas2 HNHc Feature: gene Location: 7787-8593 bp Feature: domain Description: DegV Location: 7808-8591 bp Feature: domain Description: DegV Location: 7808-8591 bp Feature: gene Location: 8886-9041 bp Feature: gene Location: 9622-11562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9952-10789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9952-10789 bp Feature: domain Description: Intron_maturas2 Location: 10927-11218 bp Feature: domain Description: Intron_maturas2 Location: 10927-11218 bp Feature: domain Description: HNHc Note: nucleases Location: 11350-11509 bp Feature: domain Description: HNHc Note: nucleases Location: 11350-11509 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DegV (TIGR00762), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDV01000121.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000121, whole genome shotgun sequence (3731 bp)
Overview 1 RT 1: 581-3728 bp Neighborhood of RT #1 [581, 3731] RVT-GII Intron_maturas2 HNHc Bacillus_HBL Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2641-3420 bp Feature: gene Location: 3482-3731 bp Feature: domain Description: Bacillus_HBL Location: 3617-3728 bp Feature: domain Description: Bacillus_HBL Location: 3617-3728 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bacillus_HBL (pfam05791), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDV01000125.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000125, whole genome shotgun sequence (17610 bp)
Overview 1 RT 1: 581-4186 bp Neighborhood of RT #1 [581, 4314] RVT-GII Intron_maturas2 HNHc DUF2512 SIR2-like Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2814-3251 bp Feature: domain Description: DUF2512 Location: 2823-3219 bp Feature: domain Description: DUF251 2 Location: 2823-3219 bp Feature: gene Location: 3403-4314 bp Feature: domain Description: SIR2-like Location: 3493-4186 bp Feature: domain Description: SIR2-like Location: 3493-4186 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2512 (pfam10710), SIR2-like (cd01406), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDV01000275.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000275, whole genome shotgun sequence (11954 bp)
Overview 1 RT 1: 1039-11953 bp Neighborhood of RT #1 [1039, 11954] TrbL CwlT_like RVT-GII HNHc CwlT_like RVT-GII Intron_maturas2 HNHc NlpD Feature: gene Location: 1039-5058 bp Feature: domain Description: TrbL Location: 1318-1816 bp Feature: domain Description: TrbL Location: 1318-1816 bp Feature: gene Location: 5055-6050 bp Feature: domain Description: CwlT_like Location: 5904-6027 bp Feature: domain Description: CwlT_like Location: 5904-6027 bp Feature: gene Location: 6724-8529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7018-7714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7018-7714 bp Feature: domain Description: HNHc Note: nucleases Location: 8275-8413 bp Feature: domain Description: HNHc Note: nucleases Location: 8275-8413 bp Feature: gene Location: 8645-8962 bp Feature: domain Description: CwlT_like Location: 8687-8951 bp Feature: domain Description: CwlT_like Location: 8687-8951 bp Feature: gene Location: 9538-11361 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9802-10636 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9802-10636 bp Feature: domain Description: Intron_maturas2 Location: 10705-11044 bp Feature: domain Description: Intron_maturas2 Location: 10705-11044 bp Feature: domain Description: HNHc Note: nucleases Location: 11182-11338 bp Feature: domain Description: HNHc Note: nucleases Location: 11182-11338 bp Feature: gene Location: 11521-11954 bp Feature: domain Description: NlpD Location: 11536-11953 bp Feature: domain Description: NlpD Location: 11536-11953 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TrbL (pfam04610), CwlT_like, RVT-GII, HNHc (smart00507), Intron_maturas2 (pfam01348), NlpD (COG0739)

Seq: NFDV01000124.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000124, whole genome shotgun sequence (74608 bp)
Overview 1 RT 1: 581-4759 bp Neighborhood of RT #1 [581, 4848] RVT-GII Intron_maturas2 HNHc COG4362 BCCT Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2632-2919 bp Feature: domain Description: COG4362 Location: 2641-2917 bp Feature: domain Description: COG4362 Location: 2641-2917 bp Feature: gene Location: 3280-4848 bp Feature: domain Description: BCCT Location: 3316-4759 bp Feature: domain Description: BCCT Location: 3316-4759 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4362 (Nitric oxide synthase, oxygenase domain ), BCCT (pfam02028), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDV01000256.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000256, whole genome shotgun sequence (6438 bp)
Overview 1 RT 1: 1-6130 bp Neighborhood of RT #1 [1, 6204] RVT-GII HNHc RVT-GII GIIM HNHc Feature: gene Location: 1-397 bp Feature: gene Location: 1364-3154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1661-2357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1661-2357 bp Feature: domain Description: HNHc Note: nucleases Location: 2897-3029 bp Feature: domain Description: HNHc Note: nucleases Location: 2897-3029 bp Feature: gene Location: 3220-3657 bp Feature: gene Location: 4330-6204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4630-5335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4630-5335 bp Feature: domain Description: GIIM Note: maturase Location: 5449-5617 bp Feature: domain Description: GIIM Note: maturase Location: 54 49-5617 bp Feature: domain Description: HNHc Note: nucleases Location: 5965-6130 bp Feature: domain Description: HNHc Note: nucleases Location: 5965-6130 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), GIIM (pfam08388)

Seq: NFDV01000151.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000151, whole genome shotgun sequence (32778 bp)
Overview 1 RT 1: 30258-32145 bp Neighborhood of RT #1 [30258, 32198] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 30258-32198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30588-31425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30588-31425 bp Feature: domain Description: Intron_maturas2 Location: 31563-31854 bp Feature: domain Description: Intron_maturas2 Location: 31563-31854 bp Feature: domain Description: HNHc Note: nucleases Location: 31986-32145 bp Feature: domain Description: HNHc Note: nucleases Location: 31986-32145 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDV01000116.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000116, whole genome shotgun sequence (20016 bp)
Overview 1 RT 1: 117-3992 bp 2 RT 2: 16521-19769 bp Neighborhood of RT #1 [117, 4786] RVT-GII Intron_maturas2 HNHc SLH SLH SLH Neighborhood of RT #2 [16521, 20016] RVT-GII Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: gene Location: 2638-3186 bp Feature: gene Location: 3311-4786 bp Feature: domain Description: SLH Location: 3506-3635 bp Feature: domain Description: SLH Location: 3506-3635 bp Feature: domain Description: SLH Location: 3692-3818 bp Feature: domain Description: SLH Location: 3692-3818 bp Feature: domain Description: SLH Location: 3866-3992 bp Feature: domain Description: SLH Location: 3866-3992 bp Feature: gene Location: 16521-16907 bp Feature: gene Location: 16925-18070 bp Feature: gene Location: 18671-20016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18941-19769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18941-19769 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), SLH (pfam00395)

Seq: NFDV01000278.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000278, whole genome shotgun sequence (14268 bp)
Overview 1 RT 1: 106-13345 bp Neighborhood of RT #1 [106, 13345] RVT-GII HNHc CwlT_like TrbL TraC-F-type RVT-GII HNHc TraC-F-type Feature: gene Location: 106-1911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 400-1096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 400-1096 bp Feature: domain Description: HNHc Note: nucleases Location: 1657-1795 bp Feature: domain Description: HNHc Note: nucleases Location: 1657 -1795 bp Feature: gene Location: 2585-3580 bp Feature: domain Description: CwlT_like Location: 3434-3557 bp Feature: domain Description: CwlT_like Location: 3434-3557 bp Feature: gene Location: 3577-7596 bp Feature: domain Description: TrbL Location: 3856-4354 bp Feature: domain Description: TrbL Location: 3856-4354 bp Feature: gene Location: 7627-8595 bp Feature: domain Description: TraC-F-type Location: 7654-8434 bp Feature: domain Description: TraC-F-type Location: 7654-8434 bp Feature: gene Location: 8887-10719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9187-9892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9187-9892 bp Feature: domain Description: HNHc Note: nucleases Location: 10471-10603 bp Feature: domain Description: HNHc Note: nucleases Location: 10471-10603 bp Feature: gene Location: 11448-12428 bp Feature: domain Description: TraC-F-type Location: 11877-12351 bp Feature: domain Description: TraC-F-type Location: 11877-12351 bp Feature: gene Location: 12431-13345 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), CwlT_like, TrbL (pfam04610), TraC-F-type (TIGR02746)

Seq: NFDV01000283.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J2 4J2_contig000283, whole genome shotgun sequence (10103 bp)
Overview 1 RT 1: 6398-9470 bp Neighborhood of RT #1 [6398, 9523] PRTRC_ThiF RVT-GII Intron_maturas2 HNHc Feature: gene Location: 6398-6769 bp Feature: gene Location: 6789-7331 bp Feature: domain Description: PRTRC_ThiF Location: 6852-7308 bp Feature: domain Description: PRTRC_ThiF Location: 6852-7308 bp Feature: gene Location: 7583-9523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7913-8750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7913-8750 bp Feature: domain Description: Intron_maturas2 Location: 8888-9179 bp Feature: domain Description: Intron_maturas2 Location: 8888-9179 bp Feature: domain Description: HNHc Note: nucleases Location: 9311-9470 bp Feature: domain Description: HNHc Note: nucleases Location: 9311-9470 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRTRC_ThiF (TIGR03736), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)