myRT

myRT report for GCA_002147165.1_ASM214716v1

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Seq: NFDU01000217.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000217, whole genome shotgun sequence (22625 bp)
Overview 1 RT 1: 19475-22456 bp Neighborhood of RT #1 [19475, 22509] YurZ Tautomerase_2 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 19475-19783 bp Feature: domain Description: YurZ Location: 19490-19769 bp Feature: domain Description: YurZ Location: 1 9490-1 9769 bp Feature: gene Location: 19787-19987 bp Feature: domain Description: Tautomerase_2 Location: 19790-19943 bp Feature: domain Description: Tautomerase_2 Location: 1 9790-1 9943 bp Feature: gene Location: 20569-22509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20899-21736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20899-21 736 bp Feature: domain Description: Intron_maturas2 Location: 21874-22165 bp Feature: domain Description: Intron_maturas2 Location: 21 874-221 65 bp Feature: domain Description: HNHc Note: nucleases Location: 22297-22456 bp Feature: domain Description: HNHc Note: nucleases Location: 22297-22456 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YurZ (COG0599), Tautomerase_2 (pfam14552), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDU01000132.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000132, whole genome shotgun sequence (21543 bp)
Overview 1 RT 1: 581-4344 bp Neighborhood of RT #1 [581, 4637] RVT-GII Intron_maturas2 HNHc DUF4879 HTH_MerR-like_sg1 UbiE Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2 177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2 309-2 468 bp Feature: gene Location: 2638-2907 bp Feature: domain Description: DUF4879 Location: 2653-2902 bp Feature: domain Description: DUF4879 Location: 2 653-2 902 bp Feature: gene Location: 3414-4637 bp Feature: domain Description: HTH_MerR-like_sg1 Location: 3417-3729 bp Feature: domain Description: HTH_MerR-like_sg1 Location: 3417-372 9 bp Feature: domain Description: UbiE Location: 4074-4344 bp Feature: domain Description: UbiE Location: 4074-4344 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4879 (pfam16219), HTH_MerR-like_sg1 (cd04777), UbiE (COG2226), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDU01000140.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000140, whole genome shotgun sequence (7404 bp)
Overview 1 RT 1: 117-3645 bp Neighborhood of RT #1 [117, 3645] RVT-GII Intron_maturas2 HNHc NO_synthase Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: gene Location: 2542-3426 bp Feature: domain Description: NO_synthase Location: 2554-3331 bp Feature: domain Description: NO_synthase Location: 2554-3 3 3 1 bp Feature: gene Location: 3459-3645 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), NO_synthase (pfam02898)

Seq: NFDU01000207.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000207, whole genome shotgun sequence (13294 bp)
Overview 1 RT 1: 7602-13125 bp Neighborhood of RT #1 [7602, 13178] CetZ_tubulin-like CetZ_tubulin-like RVT-GII Intron_maturas2 HNHc Feature: gene Location: 7602-9056 bp Feature: domain Description: CetZ_tubulin-like Location: 7641-8019 bp Feature: domain Description: CetZ_tubulin-like Location: 764 1-8019 bp Feature: domain Description: CetZ_tubulin-like Location: 8151-8505 bp Feature: domain Description: CetZ_tubulin-like Location: 8151-8505 bp Feature: gene Location: 9061-9483 bp Feature: gene Location: 11238-13178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11568-12405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11568-124 05 bp Feature: domain Description: Intron_maturas2 Location: 12543-12834 bp Feature: domain Description: Intron_maturas2 Location: 1254 3-12834 bp Feature: domain Description: HNHc Note: nucleases Location: 12966-13125 bp Feature: domain Description: HNHc Note: nucleases Location: 12966-13125 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), CetZ_tubulin-like (cd02202)

Seq: NFDU01000059.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000059, whole genome shotgun sequence (4654 bp)
Overview 1 RT 1: 56-4021 bp Neighborhood of RT #1 [56, 4074] HTH_28 HTH_28 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 56-1410 bp Feature: domain Description: HTH_28 Location: 80-218 bp Feature: domain Description: HTH_28 Location: 80-218 bp Feature: domain Description: HTH_28 Location: 245-404 bp Feature: domain Description: HTH_28 Location: 245 -404 bp Feature: gene Location: 1444-2001 bp Feature: gene Location: 2134-4074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2464-3301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2464-3301 bp Feature: domain Description: Intron_maturas2 Location: 3439-3730 bp Feature: domain Description: Intron_maturas2 Location: 3439-3730 bp Feature: domain Description: HNHc Note: nucleases Location: 3862-4021 bp Feature: domain Description: HNHc Note: nucleases Location: 3862-4021 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), HTH_28 (pfam13518)

Seq: NFDU01000120.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000120, whole genome shotgun sequence (38161 bp)
Overview 1 RT 1: 32273-37528 bp Neighborhood of RT #1 [32273, 37581] DUF3959 pPIWI_RE_X MID_pPIWI_RE RNaseH_pPIWI_RE RVT-GII Intron_maturas2 HNHc Feature: gene Location: 32273-33040 bp Feature: domain Description: DUF3959 Location: 32300-33026 bp Feature: domain Description: DUF3959 Location: 32300-33026 bp Feature: gene Location: 33248-35530 bp Feature: domain Description: pPIWI_RE_X Location: 33275-34199 bp Feature: domain Description: pPIWI_RE_X Location: 33275-34199 bp Feature: domain Description: MID_pPIWI_RE Location: 34397-34709 bp Feature: domain Description: MID_pPIWI_RE Location: 34397-34709 bp Feature: domain Description: RNaseH_pPIWI_RE Location: 34775-35438 bp Feature: domain Description: RNaseH_pPIWI_RE Location: 34775-35438 bp Feature: gene Location: 35641-37581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35971-36808 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35971-36 808 bp Feature: domain Description: Intron_maturas2 Location: 36946-37237 bp Feature: domain Description: Intron_maturas2 Location: 36 946 -37237 bp Feature: domain Description: HNHc Note: nucleases Location: 37369-37528 bp Feature: domain Description: HNHc Note: nucleases Location: 3736 9-37528 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3959 (pfam13105), pPIWI_RE_X, MID_pPIWI_RE (pfam18157), RNaseH_pPIWI_RE, RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDU01000208.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000208, whole genome shotgun sequence (4093 bp)
Overview 1 RT 1: 1-3924 bp Neighborhood of RT #1 [1, 3977] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1-61 bp Feature: gene Location: 551-1036 bp Feature: gene Location: 2037-3977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2367-3204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2367 -3204 bp Feature: domain Description: Intron_maturas2 Location: 3342-3633 bp Feature: domain Description: Intron_maturas2 Location: 3342-3633 bp Feature: domain Description: HNHc Note: nucleases Location: 3765-3924 bp Feature: domain Description: HNHc Note: nucleases Location: 37 65-3924 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDU01000202.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000202, whole genome shotgun sequence (41912 bp)
Overview 1 RT 1: 24770-29423 bp Neighborhood of RT #1 [24770, 29423] PRK03113 RVT-GII HNHc Feature: gene Location: 24770-25207 bp Feature: domain Description: PRK03113 Location: 24788-25160 bp Feature: domain Description: PRK03113 Location: 2478 8 -25160 bp Feature: gene Location: 25241-25996 bp Feature: gene Location: 26218-28125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26518-27229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26518 -27229 bp Feature: domain Description: HNHc Note: nucleases Location: 27820-27970 bp Feature: domain Description: HNHc Note: nucleases Location: 278 20-27970 bp Feature: gene Location: 28911-29147 bp Feature: gene Location: 29223-29423 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK03113 (putative disulfide oxidoreductase; Provisional), RVT-GII, HNHc (smart00507)

Seq: NFDU01000246.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000246, whole genome shotgun sequence (37392 bp)
Overview 1 RT 1: 33878-37223 bp Neighborhood of RT #1 [33878, 37276] RimL NIPSNAP RVT-GII Intron_maturas2 HNHc Feature: gene Location: 33878-34474 bp Feature: domain Description: RimL Location: 34133-34430 bp Feature: domain Description: RimL Location: 34133-34430 bp Feature: gene Location: 34447-34767 bp Feature: domain Description: NIPSNAP Location: 34471-34675 bp Feature: domain Description: NIPSNAP Location: 34471-34675 bp Feature: gene Location: 35336-37276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35666-36503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35666-36503 bp Feature: domain Description: Intron_maturas2 Location: 36641-36932 bp Feature: domain Description: Intron_maturas2 Location: 36641-369 32 bp Feature: domain Description: HNHc Note: nucleases Location: 37064-37223 bp Feature: domain Description: HNHc Note: nucleases Location: 37064-37223 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RimL (COG1670), NIPSNAP (pfam07978), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDU01000225.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000225, whole genome shotgun sequence (20252 bp)
Overview 1 RT 1: 10002-15753 bp Neighborhood of RT #1 [10002, 15782] RVT-GII HNHc LPD1 DUF3854 Feature: gene Location: 10002-11093 bp Feature: gene Location: 11528-11782 bp Feature: gene Location: 11814-13610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12108-12804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1210 8-12804 bp Feature: domain Description: HNHc Note: nucleases Location: 13404-13479 bp Feature: domain Description: HNHc Note: nucleases Location: 13404-13479 bp Feature: gene Location: 13682-14479 bp Feature: domain Description: LPD1 Location: 14228-14423 bp Feature: domain Description: LPD1 Location: 14228-14423 bp Feature: gene Location: 14469-15782 bp Feature: domain Description: DUF3854 Location: 15414-15753 bp Feature: domain Description: DUF3854 Location: 15414-15753 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), LPD1 (pfam18796), DUF3854 (pfam12965)

Seq: NFDU01000218.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000218, whole genome shotgun sequence (11109 bp)
Overview 1 RT 1: 697-10801 bp Neighborhood of RT #1 [697, 10875] RVT-GII Intron_maturas2 HNHc RVT-GII HNHc RVT-GII Intron_maturas2 HNHc RVT-GII GIIM HNHc Feature: gene Location: 697-2520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 967-1795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 967-1795 bp Feature: domain Description: Intron_maturas2 Location: 1867-2185 bp Feature: domain Description: Intron_maturas2 Location: 1867-2185 bp Feature: domain Description: HNHc Note: nucleases Location: 2338-2491 bp Feature: domain Description: HNHc Note: nucleases Location: 2338-2491 bp Feature: gene Location: 3487-5277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3784-4480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3784-4480 bp Feature: domain Description: HNHc Note: nucleases Location: 5020-5152 bp Feature: domain Description: HNHc Note: nucleases Location: 5020-5152 bp Feature: gene Location: 5343-5612 bp Feature: gene Location: 6204-8021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6474-7296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6474-7296 bp Feature: domain Description: Intron_maturas2 Location: 7377-7671 bp Feature: domain Description: Intron_maturas2 Location: 7377-7671 bp Feature: domain Description: HNHc Note: nucleases Location: 7818-7992 bp Feature: domain Description: HNHc Note: nucleases Location: 7818-7992 bp Feature: gene Location: 8122-8328 bp Feature: gene Location: 9001-10875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9301-10006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9301-10006 bp Feature: domain Description: GIIM Note: maturase Location: 10120-10288 bp Feature: domain Description: GIIM Note: maturase Location: 10120-10288 bp Feature: domain Description: HNHc Note: nucleases Location: 10636-10801 bp Feature: domain Description: HNHc Note: nucleases Location: 10636-10801 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Intron_maturas2 (pfam01348), GIIM (pfam08388)

Seq: NFDU01000100.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000100, whole genome shotgun sequence (7049 bp)
Overview 1 RT 1: 2184-6416 bp Neighborhood of RT #1 [2184, 6469] Replic_Relax RVT-GII Intron_maturas2 HNHc Feature: gene Location: 2184-2498 bp Feature: gene Location: 2606-3883 bp Feature: domain Description: Replic_Relax Location: 2690-3236 bp Feature: domain Description: Replic_Relax Location: 2690-3236 bp Feature: gene Location: 4529-6469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4859-5696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4859-5696 bp Feature: domain Description: Intron_maturas2 Location: 5834-6125 bp Feature: domain Description: Intron_maturas2 Location: 5834-612 5 bp Feature: domain Description: HNHc Note: nucleases Location: 6257-6416 bp Feature: domain Description: HNHc Note: nucleases Location: 6257-6416 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Replic_Relax (pfam13814), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDU01000165.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000165, whole genome shotgun sequence (12110 bp)
Overview 1 RT 1: 8456-11941 bp Neighborhood of RT #1 [8456, 11994] FtsK_SpoIIIE RVT-GII Intron_maturas2 HNHc Feature: gene Location: 8456-8638 bp Feature: gene Location: 8754-9485 bp Feature: domain Description: FtsK_SpoIIIE Location: 9132-9462 bp Feature: domain Description: FtsK_SpoIIIE Location: 913 2-9462 bp Feature: gene Location: 10054-11994 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10384-11221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10384-11221 bp Feature: domain Description: Intron_maturas2 Location: 11359-11650 bp Feature: domain Description: Intron_maturas2 Location: 113 59-11650 bp Feature: domain Description: HNHc Note: nucleases Location: 11782-11941 bp Feature: domain Description: HNHc Note: nucleases Location: 11782-11941 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), FtsK_SpoIIIE (pfam01580)

Seq: NFDU01000136.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000136, whole genome shotgun sequence (78995 bp)
Overview 1 RT 1: 581-3359 bp Neighborhood of RT #1 [581, 3367] RVT-GII Intron_maturas2 HNHc glpT DUF4027 Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2626-3123 bp Feature: domain Description: glpT Location: 2644-3115 bp Feature: domain Description: glpT Location: 2644-3115 bp Feature: gene Location: 3242-3367 bp Feature: domain Description: DUF4027 Location: 3254-3359 bp Feature: domain Description: DUF4027 Location: 3254-3359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT glpT (TIGR00712), DUF4027 (pfam13219), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDU01000076.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000076, whole genome shotgun sequence (19487 bp)
Overview 1 RT 1: 15259-19318 bp Neighborhood of RT #1 [15259, 19371] MarR glpT RVT-GII Intron_maturas2 HNHc Feature: gene Location: 15259-15717 bp Feature: domain Description: MarR Location: 15319-15673 bp Feature: domain Description: MarR Location: 15 319-15 673 bp Feature: gene Location: 15987-16850 bp Feature: domain Description: glpT Location: 16005-16851 bp Feature: domain Description: glpT Location: 16005-16851 bp Feature: gene Location: 17431-19371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17761-18598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17761-18598 bp Feature: domain Description: Intron_maturas2 Location: 18736-19027 bp Feature: domain Description: Intron_maturas2 Location: 18736-19027 bp Feature: domain Description: HNHc Note: nucleases Location: 19159-19318 bp Feature: domain Description: HNHc Note: nucleases Location: 1915 9-19318 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MarR (pfam01047), glpT (TIGR00712), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDU01000058.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000058, whole genome shotgun sequence (4085 bp)
Overview 1 RT 1: 1-3452 bp Neighborhood of RT #1 [1, 3505] Bacillus_HBL RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1-604 bp Feature: domain Description: Bacillus_HBL Location: 136-583 bp Feature: domain Description: Bacillus_HBL Location: 136-583 bp Feature: gene Location: 666-1445 bp Feature: gene Location: 1565-3505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1895-2732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1895-2732 bp Feature: domain Description: Intron_maturas2 Location: 2870-3161 bp Feature: domain Description: Intron_maturas2 Location: 2870-316 1 bp Feature: domain Description: HNHc Note: nucleases Location: 3293-3452 bp Feature: domain Description: HNHc Note: nucleases Location: 3293-3452 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Bacillus_HBL (pfam05791)

Seq: NFDU01000149.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000149, whole genome shotgun sequence (74608 bp)
Overview 1 RT 1: 69761-73975 bp Neighborhood of RT #1 [69761, 74028] BCCT COG4362 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 69761-71329 bp Feature: domain Description: BCCT Location: 69797-71240 bp Feature: domain Description: BCCT Location: 69797-71240 bp Feature: gene Location: 71690-71977 bp Feature: domain Description: COG4362 Location: 71699-71975 bp Feature: domain Description: COG4362 Location: 71699-71975 bp Feature: gene Location: 72088-74028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72418-73255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72418-73255 bp Feature: domain Description: Intron_maturas2 Location: 73393-73684 bp Feature: domain Description: Intron_maturas2 Location: 73393-73684 bp Feature: domain Description: HNHc Note: nucleases Location: 73816-73975 bp Feature: domain Description: HNHc Note: nucleases Location: 73816-73975 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BCCT (pfam02028), COG4362 (Nitric oxide synthase, oxygenase domain ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDU01000214.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000214, whole genome shotgun sequence (14268 bp)
Overview 1 RT 1: 106-13345 bp Neighborhood of RT #1 [106, 13345] RVT-GII HNHc CwlT_like TrbL TraC-F-type RVT-GII HNHc TraC-F-type Feature: gene Location: 106-1911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 400-1096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 400-1096 bp Feature: domain Description: HNHc Note: nucleases Location: 1657-1795 bp Feature: domain Description: HNHc Note: nucleases Location: 1657-1795 bp Feature: gene Location: 2585-3580 bp Feature: domain Description: CwlT_like Location: 3434-3557 bp Feature: domain Description: CwlT_like Location: 3434-3557 bp Feature: gene Location: 3577-7596 bp Feature: domain Description: TrbL Location: 3856-4354 bp Feature: domain Description: TrbL Location: 3856-4354 bp Feature: gene Location: 7627-8595 bp Feature: domain Description: TraC-F-type Location: 7654-8434 bp Feature: domain Description: TraC-F-type Location: 7654-8434 bp Feature: gene Location: 8887-10719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9187-9892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 918 7-9892 bp Feature: domain Description: HNHc Note: nucleases Location: 10471-10603 bp Feature: domain Description: HNHc Note: nucleases Location: 10471-10603 bp Feature: gene Location: 11448-12428 bp Feature: domain Description: TraC-F-type Location: 11877-12351 bp Feature: domain Description: TraC-F-type Location: 118 77-12351 bp Feature: gene Location: 12431-13345 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), CwlT_like, TrbL (pfam04610), TraC-F-type (TIGR02746)

Seq: NFDU01000219.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000219, whole genome shotgun sequence (8796 bp)
Overview 1 RT 1: 107-6651 bp Neighborhood of RT #1 [107, 6651] RVT-GII HNHc RVT-GII Intron_maturas2 HNHc Feature: gene Location: 107-1897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404-1100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404-1100 bp Feature: domain Description: HNHc Note: nucleases Location: 1640-1772 bp Feature: domain Description: HNHc Note: nucleases Location: 1640-1772 bp Feature: gene Location: 2864-4687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3134-3962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3134-3962 bp Feature: domain Description: Intron_maturas2 Location: 4034-4352 bp Feature: domain Description: Intron_maturas2 Location: 4034-4352 bp Feature: domain Description: HNHc Note: nucleases Location: 4505-4658 bp Feature: domain Description: HNHc Note: nucleases Location: 4505-4658 bp Feature: gene Location: 5288-6433 bp Feature: gene Location: 6451-6651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Intron_maturas2 (pfam01348)

Seq: NFDU01000118.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000118, whole genome shotgun sequence (20406 bp)
Overview 1 RT 1: 16515-20237 bp Neighborhood of RT #1 [16515, 20290] DegV RVT-GII Intron_maturas2 HNHc Feature: gene Location: 16515-17321 bp Feature: domain Description: DegV Location: 16536-17319 bp Feature: domain Description: DegV Location: 16536-17319 bp Feature: gene Location: 17614-17769 bp Feature: gene Location: 18350-20290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18680-19517 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18680-19517 bp Feature: domain Description: Intron_maturas2 Location: 19655-19946 bp Feature: domain Description: Intron_maturas2 Location: 19655-19946 bp Feature: domain Description: HNHc Note: nucleases Location: 20078-20237 bp Feature: domain Description: HNHc Note: nucleases Location: 20 078-20 237 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DegV (TIGR00762), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDU01000138.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000138, whole genome shotgun sequence (16707 bp)
Overview 1 RT 1: 117-5144 bp Neighborhood of RT #1 [117, 5176] RVT-GII Intron_maturas2 HNHc Tar CPBP Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: gene Location: 2638-3720 bp Feature: domain Description: Tar Location: 3010-3721 bp Feature: domain Description: Tar Location: 3010-3721 bp Feature: gene Location: 4691-5176 bp Feature: domain Description: CPBP Location: 4838-5144 bp Feature: domain Description: CPBP Location: 4838-5144 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Tar (COG0840), CPBP

Seq: NFDU01000085.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000085, whole genome shotgun sequence (9491 bp)
Overview 1 RT 1: 4047-8763 bp Neighborhood of RT #1 [4047, 8837] rpsA TraG-D_C Ftsk_gamma RVT-GII GIIM HNHc Feature: gene Location: 4047-5030 bp Feature: domain Description: rpsA Location: 4314-4851 bp Feature: domain Description: rpsA Location: 4314-4851 bp Feature: gene Location: 5288-6730 bp Feature: domain Description: TraG-D_C Location: 5300-5618 bp Feature: domain Description: TraG-D_C Location: 5300-5618 bp Feature: domain Description: Ftsk_gamma Location: 6053-6212 bp Feature: domain Description: Ftsk_gamma Location: 6053-6212 bp Feature: gene Location: 6963-8837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7263-7968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7263-7968 bp Feature: domain Description: GIIM Note: maturase Location: 8082-8250 bp Feature: domain Description: GIIM Note: maturase Location: 8082-8250 bp Feature: domain Description: HNHc Note: nucleases Location: 8598-8763 bp Feature: domain Description: HNHc Note: nucleases Location: 8598-8763 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpsA (TIGR00717), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NFDU01000134.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000134, whole genome shotgun sequence (45860 bp)
Overview 1 RT 1: 581-3678 bp Neighborhood of RT #1 [581, 3678] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 23 09-2468 bp Feature: gene Location: 2638-2895 bp Feature: gene Location: 3400-3678 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDU01000130.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000130, whole genome shotgun sequence (10103 bp)
Overview 1 RT 1: 581-3706 bp Neighborhood of RT #1 [581, 3706] RVT-GII Intron_maturas2 HNHc PRTRC_ThiF Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-24 68 bp Feature: gene Location: 2773-3315 bp Feature: domain Description: PRTRC_ThiF Location: 2836-3292 bp Feature: domain Description: PRTRC_ThiF Location: 2836-3292 bp Feature: gene Location: 3335-3706 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRTRC_ThiF (TIGR03736), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDU01000205.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000205, whole genome shotgun sequence (20419 bp)
Overview 1 RT 1: 16708-20250 bp Neighborhood of RT #1 [16708, 20303] Acetyltransf_8 nicotinamidase_related RVT-GII Intron_maturas2 HNHc Feature: gene Location: 16708-17244 bp Feature: domain Description: Acetyltransf_8 Location: 16750-17179 bp Feature: domain Description: Acetyltransf_8 Location: 16750-17179 bp Feature: gene Location: 17279-17794 bp Feature: domain Description: nicotinamidase_related Location: 17291-17741 bp Feature: domain Description: nicotinamidase_related Location: 17291-17741 bp Feature: gene Location: 18363-20303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18693-19530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18693-19530 bp Feature: domain Description: Intron_maturas2 Location: 19668-19959 bp Feature: domain Description: Intron_maturas2 Location: 19668-19959 bp Feature: domain Description: HNHc Note: nucleases Location: 20091-20250 bp Feature: domain Description: HNHc Note: nucleases Location: 20091-2025 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_8 (pfam13523), nicotinamidase_related (cd01014), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDU01000078.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000078, whole genome shotgun sequence (277081 bp)
Overview 1 RT 1: 272496-276448 bp Neighborhood of RT #1 [272496, 276501] zf-HC2 DUF4179 DUF2812 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 272496-273473 bp Feature: domain Description: zf-HC2 Location: 272529-272604 bp Feature: domain Description: zf-HC2 Location: 272529-2726 04 bp Feature: domain Description: DUF4179 Location: 272808-273099 bp Feature: domain Description: DUF4179 Location: 272808-273099 bp Feature: gene Location: 273850-274401 bp Feature: domain Description: DUF2812 Location: 273853-274147 bp Feature: domain Description: DUF2812 Location: 273853-274147 bp Feature: gene Location: 274561-276501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274891-275728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274891-275728 bp Feature: domain Description: Intron_maturas2 Location: 275866-276157 bp Feature: domain Description: Intron_maturas2 Location: 275866-276157 bp Feature: domain Description: HNHc Note: nucleases Location: 276289-276448 bp Feature: domain Description: HNHc Note: nucleases Location: 276289-276448 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT zf-HC2 (pfam13490), DUF4179 (pfam13786), DUF2812 (pfam11193), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDU01000034.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000034, whole genome shotgun sequence (6660 bp)
Overview 1 RT 1: 1595-6491 bp Neighborhood of RT #1 [1595, 6544] Chondroitinas_B Bacillus_HBL RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1595-2119 bp Feature: domain Description: Chondroitinas_B Location: 1793-2033 bp Feature: domain Description: Chondroitinas_B Location: 1793-2033 bp Feature: gene Location: 3487-4023 bp Feature: domain Description: Bacillus_HBL Location: 3604-4021 bp Feature: domain Description: Bacillus_HBL Location: 3604-4021 bp Feature: gene Location: 4604-6544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4934-5771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4934-5771 bp Feature: domain Description: Intron_maturas2 Location: 5909-6200 bp Feature: domain Description: Intron_maturas2 Location: 5909-6200 bp Feature: domain Description: HNHc Note: nucleases Location: 6332-6491 bp Feature: domain Description: HNHc Note: nucleases Location: 6332-6491 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Chondroitinas_B (pfam14592), Bacillus_HBL (pfam05791), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDU01000112.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000112, whole genome shotgun sequence (39873 bp)
Overview 1 RT 1: 36140-39240 bp Neighborhood of RT #1 [36140, 39293] DnaD_dom RVT-GII Intron_maturas2 HNHc Feature: gene Location: 36140-36922 bp Feature: domain Description: DnaD_dom Location: 36668-36851 bp Feature: domain Description: DnaD_dom Location: 36668-36851 bp Feature: gene Location: 37012-37138 bp Feature: gene Location: 37353-39293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37683-38520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37683-38520 bp Feature: domain Description: Intron_maturas2 Location: 38658-38949 bp Feature: domain Description: Intron_maturas2 Location: 38658-38949 bp Feature: domain Description: HNHc Note: nucleases Location: 39081-39240 bp Feature: domain Description: HNHc Note: nucleases Location: 39081-39240 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DnaD_dom (TIGR01446), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDU01000133.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000133, whole genome shotgun sequence (5210 bp)
Overview 1 RT 1: 581-4829 bp Neighborhood of RT #1 [581, 4831] RVT-GII Intron_maturas2 HNHc AcoR Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2745-2858 bp Feature: gene Location: 2981-4831 bp Feature: domain Description: AcoR Location: 3005-4829 bp Feature: domain Description: AcoR Location: 3005-4829 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcoR (COG3284), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDU01000213.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000213, whole genome shotgun sequence (11575 bp)
Overview 1 RT 1: 106-4354 bp Neighborhood of RT #1 [106, 7596] RVT-GII HNHc CwlT_like TrbL Feature: gene Location: 106-1911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 400-1096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 400-1096 bp Feature: domain Description: HNHc Note: nucleases Location: 1657-1795 bp Feature: domain Description: HNHc Note: nucleases Location: 1657-1795 bp Feature: gene Location: 2585-3580 bp Feature: domain Description: CwlT_like Location: 3434-3557 bp Feature: domain Description: CwlT_like Location: 3434-3557 bp Feature: gene Location: 3577-7596 bp Feature: domain Description: TrbL Location: 3856-4354 bp Feature: domain Description: TrbL Location: 3856-4354 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), CwlT_like, TrbL (pfam04610)

Seq: NFDU01000220.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000220, whole genome shotgun sequence (19317 bp)
Overview 1 RT 1: 107-6837 bp Neighborhood of RT #1 [107, 6837] RVT-GII HNHc RVT-GII Intron_maturas2 HNHc Feature: gene Location: 107-1897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404-1100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404-1100 bp Feature: domain Description: HNHc Note: nucleases Location: 1640-1772 bp Feature: domain Description: HNHc Note: nucleases Location: 1640-1772 bp Feature: gene Location: 2864-4687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3134-3962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 34-3962 bp Feature: domain Description: Intron_maturas2 Location: 4034-4352 bp Feature: domain Description: Intron_maturas2 Location: 4034-4352 bp Feature: domain Description: HNHc Note: nucleases Location: 4505-4658 bp Feature: domain Description: HNHc Note: nucleases Location: 4505-4658 bp Feature: gene Location: 5288-6433 bp Feature: gene Location: 6451-6837 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Intron_maturas2 (pfam01348)

Seq: NFDU01000223.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000223, whole genome shotgun sequence (23908 bp)
Overview 1 RT 1: 7054-13845 bp Neighborhood of RT #1 [7054, 13907] T_den_put_tspse DUF3854 RVT-GII HNHc LPD1 Feature: gene Location: 7054-7977 bp Feature: domain Description: T_den_put_tspse Location: 7096-7960 bp Feature: domain Description: T_den_put_tspse Location: 7096-7960 bp Feature: gene Location: 8089-8583 bp Feature: domain Description: DUF3854 Location: 8200-8554 bp Feature: domain Description: DUF3854 Location: 8200-8554 bp Feature: gene Location: 8707-10539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9019-9718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9019-9718 bp Feature: domain Description: HNHc Note: nucleases Location: 10258-10423 bp Feature: domain Description: HNHc Note: nucleases Location: 10258-10423 bp Feature: gene Location: 11312-12142 bp Feature: gene Location: 12132-13907 bp Feature: domain Description: LPD1 Location: 13656-13845 bp Feature: domain Description: LPD1 Location: 13656-13845 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LPD1 (pfam18796), T_den_put_tspse (TIGR01784), DUF3854 (pfam12965), RVT-GII, HNHc (smart00507)

Seq: NFDU01000135.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000135, whole genome shotgun sequence (163416 bp)
Overview 1 RT 1: 581-5119 bp 2 RT 2: 159679-163247 bp Neighborhood of RT #1 [581, 5148] RVT-GII Intron_maturas2 HNHc Arm-DNA-bind_4 Phage_int_SAM_3 INT_ICEBs1_C_like PRK13670 Neighborhood of RT #2 [159679, 163300] DUF3886 MPP_YhcR_N RVT-GII Intron_maturas2 HNHc Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2642-3772 bp Feature: domain Description: Arm-DNA-bind_4 Location: 2672-2804 bp Feature: domain Description: Arm-DNA-bind_4 Location: 2672-2804 bp Feature: domain Description: Phage_int_SAM_3 Location: 2831-2999 bp Feature: domain Description: Phage_int_SAM_3 Location: 2831-2999 bp Feature: domain Description: INT_ICEBs1_C_like Location: 3158-3665 bp Feature: domain Description: INT_ICEBs1_C_like Location: 3158-3665 bp Feature: gene Location: 3922-5148 bp Feature: domain Description: PRK13670 Location: 3925-5119 bp Feature: domain Description: PRK13670 Location: 3925-5119 bp Feature: gene Location: 159679-159942 bp Feature: domain Description: DUF3886 Location: 159736-159934 bp Feature: domain Description: DUF3886 Location: 159736-159934 bp Feature: gene Location: 160144-160779 bp Feature: domain Description: MPP_YhcR_N Location: 160258-160780 bp Feature: domain Description: MPP_YhcR_N Location: 160258-160780 bp Feature: gene Location: 161360-163300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 161690-162527 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 161690-162527 bp Feature: domain Description: Intron_maturas2 Location: 162665-162956 bp Feature: domain Description: Intron_maturas2 Location: 162665-162956 bp Feature: domain Description: HNHc Note: nucleases Location: 163088-163247 bp Feature: domain Description: HNHc Note: nucleases Location: 163088-163247 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_4 (pfam14657), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), PRK13670 (nucleotidyltransferase), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF3886 (pfam13025), MPP_YhcR_N (cd07412)

Seq: NFDU01000235.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000235, whole genome shotgun sequence (10761 bp)
Overview 1 RT 1: 299-6481 bp Neighborhood of RT #1 [299, 9723] RVT-GII HNHc CwlT_like TrbL Feature: gene Location: 299-874 bp Feature: gene Location: 891-2182 bp Feature: gene Location: 2233-4038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2527-3223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2527-3223 bp Feature: domain Description: HNHc Note: nucleases Location: 3784-3922 bp Feature: domain Description: HNHc Note: nucleases Location: 3784-3922 bp Feature: gene Location: 4712-5707 bp Feature: domain Description: CwlT_like Location: 5561-5684 bp Feature: domain Description: CwlT_like Location: 5561-5684 bp Feature: gene Location: 5704-9723 bp Feature: domain Description: TrbL Location: 5983-6481 bp Feature: domain Description: TrbL Location: 5983-6481 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), TrbL (pfam04610)

Seq: NFDU01000129.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000129, whole genome shotgun sequence (4191 bp)
Overview 1 RT 1: 581-4191 bp Neighborhood of RT #1 [581, 4191] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2638-4191 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDU01000091.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000091, whole genome shotgun sequence (31735 bp)
Overview 1 RT 1: 28075-31102 bp Neighborhood of RT #1 [28075, 31155] Replic_Relax T7_EssCb_Firm RVT-GII Intron_maturas2 HNHc Feature: gene Location: 28075-28695 bp Feature: domain Description: Replic_Relax Location: 28123-28588 bp Feature: domain Description: Replic_Relax Location: 28123-28588 bp Feature: gene Location: 28637-29098 bp Feature: domain Description: T7_EssCb_Firm Location: 28655-28955 bp Feature: domain Description: T7_EssCb_Firm Location: 28655-28955 bp Feature: gene Location: 29215-31155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29545-30382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29545-30382 bp Feature: domain Description: Intron_maturas2 Location: 30520-30811 bp Feature: domain Description: Intron_maturas2 Location: 30520-30811 bp Feature: domain Description: HNHc Note: nucleases Location: 30943-31102 bp Feature: domain Description: HNHc Note: nucleases Location: 30943-31102 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Replic_Relax (pfam13814), T7_EssCb_Firm (TIGR03928), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDU01000041.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000041, whole genome shotgun sequence (2075 bp)
Overview 1 RT 1: 647-1730 bp Neighborhood of RT #1 [647, 1921] RVT-GII GIIM Feature: gene Location: 647-1921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 848-1463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 848-1463 bp Feature: domain Description: GIIM Note: maturase Location: 1523-1730 bp Feature: domain Description: GIIM Note: maturase Location: 1523-1730 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NFDU01000137.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000137, whole genome shotgun sequence (18631 bp)
Overview 1 RT 1: 117-3222 bp 2 RT 2: 13038-17903 bp Neighborhood of RT #1 [117, 3222] RVT-GII Intron_maturas2 HNHc E1_enzyme_family Neighborhood of RT #2 [13038, 17977] TraG-D_C Ftsk_gamma RVT-GII GIIM HNHc Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: gene Location: 2626-2808 bp Feature: domain Description: E1_enzyme_family Location: 2674-2791 bp Feature: domain Description: E1_enzyme_family Location: 2674-2791 bp Feature: gene Location: 2821-3222 bp Feature: gene Location: 13038-13808 bp Feature: gene Location: 14080-15951 bp Feature: domain Description: TraG-D_C Location: 14173-14488 bp Feature: domain Description: TraG-D_C Location: 14173-14488 bp Feature: domain Description: Ftsk_gamma Location: 14896-15076 bp Feature: domain Description: Ftsk_gamma Location: 14896-15076 bp Feature: gene Location: 16103-17977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16403-17108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16403-17108 bp Feature: domain Description: GIIM Note: maturase Location: 17222-17390 bp Feature: domain Description: GIIM Note: maturase Location: 17222-17390 bp Feature: domain Description: HNHc Note: nucleases Location: 17738-17903 bp Feature: domain Description: HNHc Note: nucleases Location: 17738 -17903 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), E1_enzyme_family (cl22428), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), GIIM (pfam08388)

Seq: NFDU01000222.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000222, whole genome shotgun sequence (18687 bp)
Overview 1 RT 1: 15248-18054 bp Neighborhood of RT #1 [15248, 18107] DUF4865 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 15248-15796 bp Feature: domain Description: DUF4865 Location: 15251-15791 bp Feature: domain Description: DUF4865 Location: 15251-15791 bp Feature: gene Location: 15839-16051 bp Feature: gene Location: 16167-18107 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16497-17334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16497-17334 bp Feature: domain Description: Intron_maturas2 Location: 17472-17763 bp Feature: domain Description: Intron_maturas2 Location: 17472-17763 bp Feature: domain Description: HNHc Note: nucleases Location: 17895-18054 bp Feature: domain Description: HNHc Note: nucleases Location: 17895-18054 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4865 (pfam16157), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDU01000176.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000176, whole genome shotgun sequence (4134 bp)
Overview 1 RT 1: 1-3965 bp Neighborhood of RT #1 [1, 4018] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1-824 bp Feature: gene Location: 949-1497 bp Feature: gene Location: 2078-4018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2408-3245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 240 8-3245 bp Feature: domain Description: Intron_maturas2 Location: 3383-3674 bp Feature: domain Description: Intron_maturas2 Location: 3383-3674 bp Feature: domain Description: HNHc Note: nucleases Location: 3806-3965 bp Feature: domain Description: HNHc Note: nucleases Location: 3806-3965 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDU01000172.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000172, whole genome shotgun sequence (53087 bp)
Overview 1 RT 1: 48895-52454 bp Neighborhood of RT #1 [48895, 52507] DUF4250 RHH_3 PRK09419 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 48895-49371 bp Feature: domain Description: DUF4250 Location: 48952-49036 bp Feature: domain Description: DUF4250 Location: 48952-49036 bp Feature: domain Description: RHH_3 Location: 49213-49342 bp Feature: domain Description: RHH_3 Location: 49213-49342 bp Feature: gene Location: 49497-50450 bp Feature: domain Description: PRK09419 Location: 49506-50445 bp Feature: domain Description: PRK0941 9 Location: 49506-50445 bp Feature: gene Location: 50567-52507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50897-51734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50897-51734 bp Feature: domain Description: Intron_maturas2 Location: 51872-52163 bp Feature: domain Description: Intron_maturas2 Location: 51872-52163 bp Feature: domain Description: HNHc Note: nucleases Location: 52295-52454 bp Feature: domain Description: HNHc Note: nucleases Location: 52295-52454 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4250 (pfam14056), RHH_3 (pfam12651), PRK09419 (multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase/5'-nucleotidase), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDU01000105.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000105, whole genome shotgun sequence (9968 bp)
Overview 1 RT 1: 4737-9799 bp Neighborhood of RT #1 [4737, 9852] HTH_XRE RVT-GII Intron_maturas2 HNHc Feature: gene Location: 4737-5882 bp Feature: gene Location: 6321-6665 bp Feature: domain Description: HTH_XRE Location: 6336-6507 bp Feature: domain Description: HTH_XRE Location: 6336-6507 bp Feature: gene Location: 7912-9852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8242-9079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8242 -9079 bp Feature: domain Description: Intron_maturas2 Location: 9217-9508 bp Feature: domain Description: Intron_maturas2 Location: 9217-9508 bp Feature: domain Description: HNHc Note: nucleases Location: 9640-9799 bp Feature: domain Description: HNHc Note: nucleases Location: 9640-9799 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDU01000191.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000191, whole genome shotgun sequence (43978 bp)
Overview 1 RT 1: 25347-32576 bp 2 RT 2: 39485-43809 bp Neighborhood of RT #1 [25347, 32576] RVT-GII GIIM KOG1000 KOG1000 Neighborhood of RT #2 [39485, 43862] LolD LolE RVT-GII Intron_maturas2 HNHc Feature: gene Location: 25347-25574 bp Feature: gene Location: 25646-26539 bp Feature: gene Location: 27301-29166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27601-28306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27601-28306 bp Feature: domain Description: GIIM Note: maturase Location: 28393-28576 bp Feature: domain Description: GIIM Note: maturase Location: 28393-28576 bp Feature: gene Location: 29441-31846 bp Feature: domain Description: KOG1000 Location: 30152-30368 bp Feature: domain Description: KOG1000 Location: 30152-30368 bp Feature: domain Description: KOG1000 Location: 30971-31304 bp Feature: domain Description: KOG1000 Location: 30971-31304 bp Feature: gene Location: 31863-32576 bp Feature: gene Location: 39485-40237 bp Feature: domain Description: LolD Location: 39500-40166 bp Feature: domain Description: LolD Location: 39500-40166 bp Feature: gene Location: 40245-41396 bp Feature: domain Description: LolE Location: 40257-41343 bp Feature: domain Description: LolE Location: 40257-41343 bp Feature: gene Location: 41922-43862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42252-43089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42252-43 089 bp Feature: domain Description: Intron_maturas2 Location: 43227-43518 bp Feature: domain Description: Intron_maturas2 Location: 43 227-43 518 bp Feature: domain Description: HNHc Note: nucleases Location: 43650-43809 bp Feature: domain Description: HNHc Note: nucleases Location: 43 650-43 809 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), LolD (COG1136), LolE (COG4591), Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDU01000141.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000141, whole genome shotgun sequence (28623 bp)
Overview 1 RT 1: 117-5345 bp Neighborhood of RT #1 [117, 5345] RVT-GII Intron_maturas2 HNHc CwlA SH3_3 SLH SLH SLH Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44 7-1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: gene Location: 2773-4080 bp Feature: domain Description: CwlA Location: 2812-3304 bp Feature: domain Description: CwlA Location: 2812-3304 bp Feature: domain Description: SH3_3 Location: 3364-3490 bp Feature: domain Description: SH3_3 Location: 3364-3490 bp Feature: domain Description: SLH Location: 3562-3679 bp Feature: domain Description: SLH Location: 3562-3679 bp Feature: domain Description: SLH Location: 3724-3853 bp Feature: domain Description: SLH Location: 3724-3853 bp Feature: domain Description: SLH Location: 3916-4042 bp Feature: domain Description: SLH Location: 3916-4042 bp Feature: gene Location: 4887-5345 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), CwlA (COG5632), SH3_3 (pfam08239), SLH (pfam00395)

Seq: NFDU01000156.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000156, whole genome shotgun sequence (20567 bp)
Overview 1 RT 1: 17186-20398 bp Neighborhood of RT #1 [17186, 20451] PadR RVT-GII Intron_maturas2 HNHc Feature: gene Location: 17186-17431 bp Feature: gene Location: 17586-17900 bp Feature: domain Description: PadR Location: 17634-17844 bp Feature: domain Description: PadR Location: 17634-17844 bp Feature: gene Location: 18511-20451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18841-19678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18841-19678 bp Feature: domain Description: Intron_maturas2 Location: 19816-20107 bp Feature: domain Description: Intron_maturas2 Location: 19816-20107 bp Feature: domain Description: HNHc Note: nucleases Location: 20239-20398 bp Feature: domain Description: HNHc Note: nucleases Location: 20239-20398 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PadR (pfam03551), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDU01000199.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000199, whole genome shotgun sequence (8561 bp)
Overview 1 RT 1: 235-7836 bp Neighborhood of RT #1 [235, 7865] RVT-GII GIIM HNHc RVT-GII HNHc RVT-GII Intron_maturas2 HNHc Feature: gene Location: 235-2109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 535-1240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 535-1240 bp Feature: domain Description: GIIM Note: maturase Location: 1354-1522 bp Feature: domain Description: GIIM Note: maturase Location: 1354-1522 bp Feature: domain Description: HNHc Note: nucleases Location: 1870-2035 bp Feature: domain Description: HNHc Note: nucleases Location: 1870-2035 bp Feature: gene Location: 2782-3219 bp Feature: gene Location: 3285-5075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3582-4278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3582-4278 bp Feature: domain Description: HNHc Note: nucleases Location: 4818-4950 bp Feature: domain Description: HNHc Note: nucleases Location: 4818-4950 bp Feature: gene Location: 6042-7865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6312-7140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6312-7140 bp Feature: domain Description: Intron_maturas2 Location: 7212-7530 bp Feature: domain Description: Intron_maturas2 Location: 7212-7530 bp Feature: domain Description: HNHc Note: nucleases Location: 7683-7836 bp Feature: domain Description: HNHc Note: nucleases Location: 7683-7836 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), Intron_maturas2 (pfam01348)

Seq: NFDU01000128.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000128, whole genome shotgun sequence (5371 bp)
Overview 1 RT 1: 581-5059 bp Neighborhood of RT #1 [581, 5334] RVT-GII Intron_maturas2 HNHc Endotoxin_N DDE_Tnp_1 Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2600-3223 bp Feature: domain Description: Endotoxin_N Location: 2741-3188 bp Feature: domain Description: Endotoxin_N Location: 2741-3188 bp Feature: gene Location: 3844-5334 bp Feature: domain Description: DDE_Tnp_1 Location: 4261-5059 bp Feature: domain Description: DDE_Tnp_1 Location: 4261-5059 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Endotoxin_N (pfam03945), DDE_Tnp_1 (pfam01609), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDU01000127.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000127, whole genome shotgun sequence (32778 bp)
Overview 1 RT 1: 581-5380 bp Neighborhood of RT #1 [581, 5385] RVT-GII Intron_maturas2 HNHc COG4932 COG4932 Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 3007-4155 bp Feature: domain Description: COG4932 Location: 3052-4144 bp Feature: domain Description: COG4932 Location: 3052-4144 bp Feature: gene Location: 4843-5385 bp Feature: domain Description: COG4932 Location: 4849-5380 bp Feature: domain Description: COG4932 Location: 48 49-5380 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4932 (Uncharacterized surface anchored protein ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDU01000139.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000139, whole genome shotgun sequence (55325 bp)
Overview 1 RT 1: 117-5370 bp Neighborhood of RT #1 [117, 5399] RVT-GII Intron_maturas2 HNHc PRK12896 CcmA Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: gene Location: 3545-4291 bp Feature: domain Description: PRK12896 Location: 3548-4286 bp Feature: domain Description: PRK12896 Location: 3548-4286 bp Feature: gene Location: 4497-5399 bp Feature: domain Description: CcmA Location: 4500-5370 bp Feature: domain Description: CcmA Location: 4500-5370 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK12896 (methionine aminopeptidase; Reviewed), CcmA (COG4133)

Seq: NFDU01000131.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000131, whole genome shotgun sequence (16881 bp)
Overview 1 RT 1: 581-4186 bp Neighborhood of RT #1 [581, 4314] RVT-GII Intron_maturas2 HNHc DUF2512 SIR2-like Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2814-3251 bp Feature: domain Description: DUF2512 Location: 2823-3219 bp Feature: domain Description: DUF2512 Location: 2823-3219 bp Feature: gene Location: 3403-4314 bp Feature: domain Description: SIR2-like Location: 3493-4186 bp Feature: domain Description: SIR2-like Location: 3493-4186 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2512 (pfam10710), SIR2-like (cd01406), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDU01000093.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000093, whole genome shotgun sequence (14216 bp)
Overview 1 RT 1: 9892-14047 bp Neighborhood of RT #1 [9892, 14100] thiol_BshB2 PRK06172 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 9892-10554 bp Feature: domain Description: thiol_BshB2 Location: 9901-10549 bp Feature: domain Description: thiol_BshB2 Location: 9901-10549 bp Feature: gene Location: 10667-11410 bp Feature: domain Description: PRK06172 Location: 10670-11405 bp Feature: domain Description: PRK06172 Location: 10670-11405 bp Feature: gene Location: 12160-14100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12490-13327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12490-13327 bp Feature: domain Description: Intron_maturas2 Location: 13465-13756 bp Feature: domain Description: Intron_maturas2 Location: 13465-13756 bp Feature: domain Description: HNHc Note: nucleases Location: 13888-14047 bp Feature: domain Description: HNHc Note: nucleases Location: 13888-14047 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06172 (SDR family oxidoreductase), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), thiol_BshB2 (TIGR04000)

Seq: NFDU01000037.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000037, whole genome shotgun sequence (71885 bp)
Overview 1 RT 1: 68139-71252 bp Neighborhood of RT #1 [68139, 71305] EFh_HEF_SCGN RVT-GII Intron_maturas2 HNHc Feature: gene Location: 68139-68255 bp Feature: gene Location: 68721-69203 bp Feature: domain Description: EFh_HEF_SCGN Location: 68799-69054 bp Feature: domain Description: EFh_HEF_SCGN Location: 68799-69054 bp Feature: gene Location: 69365-71305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69695-70532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69695-70532 bp Feature: domain Description: Intron_maturas2 Location: 70670-70961 bp Feature: domain Description: Intron_maturas2 Location: 70670-70961 bp Feature: domain Description: HNHc Note: nucleases Location: 71093-71252 bp Feature: domain Description: HNHc Note: nucleases Location: 71093-71252 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EFh_HEF_SCGN (cd16178), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDU01000236.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000236, whole genome shotgun sequence (13286 bp)
Overview 1 RT 1: 299-9006 bp Neighborhood of RT #1 [299, 12248] NlpD Spr RVT-GII Intron_maturas2 HNHc CwlT_like RVT-GII HNHc CwlT_like TrbL Feature: gene Location: 299-874 bp Feature: gene Location: 891-1766 bp Feature: domain Description: NlpD Location: 906-1335 bp Feature: domain Description: NlpD Location: 906-1335 bp Feature: domain Description: Spr Location: 1371-1707 bp Feature: domain Description: Spr Location: 1371-1707 bp Feature: gene Location: 1926-3749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2190-3024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2190-3024 bp Feature: domain Description: Intron_maturas2 Location: 3093-3432 bp Feature: domain Description: Intron_maturas2 Location: 3093-3432 bp Feature: domain Description: HNHc Note: nucleases Location: 3570-3726 bp Feature: domain Description: HNHc Note: nucleases Location: 3570-3726 bp Feature: gene Location: 4325-4642 bp Feature: domain Description: CwlT_like Location: 4367-4631 bp Feature: domain Description: CwlT_like Location: 4367-4631 bp Feature: gene Location: 4758-6563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5052-5748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5052-5748 bp Feature: domain Description: HNHc Note: nucleases Location: 6309-6447 bp Feature: domain Description: HNHc Note: nucleases Location: 6309-6447 bp Feature: gene Location: 7237-8232 bp Feature: domain Description: CwlT_like Location: 8086-8209 bp Feature: domain Description: CwlT_like Location: 8086-8209 bp Feature: gene Location: 8229-12248 bp Feature: domain Description: TrbL Location: 8508-9006 bp Feature: domain Description: TrbL Location: 8508-9006 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), NlpD (COG0739), Spr (COG0791), CwlT_like, TrbL (pfam04610)

Seq: NFDU01000142.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J1 4J1_contig000142, whole genome shotgun sequence (29766 bp)
Overview 1 RT 1: 117-4394 bp Neighborhood of RT #1 [117, 4555] RVT-GII Intron_maturas2 HNHc MFS_MefA_like AcrR Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: gene Location: 2626-3873 bp Feature: domain Description: MFS_MefA_like Location: 2680-3853 bp Feature: domain Description: MFS_MefA_like Location: 2680-3853 bp Feature: gene Location: 3920-4555 bp Feature: domain Description: AcrR Location: 3944-4394 bp Feature: domain Description: AcrR Location: 3944-4394 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), MFS_MefA_like (cd06173), AcrR (COG1309)