myRT

myRT report for GCA_002147235.1_ASM214723v1

Download annotations/find similar RTs

Seq: NFDX01000108.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000108, whole genome shotgun sequence (31727 bp)
Overview 1 RT 1: 1-4329 bp Neighborhood of RT #1 [1, 4334] RVT-GII Intron_maturas2 HNHc COG4932 COG4932 Feature: gene Location: 1-1470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-697 bp Feature: domain Description: Intron_maturas2 Location: 835-1126 bp Feature: domain Description: Intron_maturas2 Location: 835-1 1 26 bp Feature: domain Description: HNHc Note: nucleases Location: 1258-1417 bp Feature: domain Description: HNHc Note: nucleases Location: 1 258-1 41 7 bp Feature: gene Location: 1956-3104 bp Feature: domain Description: COG4932 Location: 2001-3093 bp Feature: domain Description: COG4932 Location: 2001 -3093 bp Feature: gene Location: 3792-4334 bp Feature: domain Description: COG4932 Location: 3798-4329 bp Feature: domain Description: COG4932 Location: 3798-4329 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), COG4932 (Uncharacterized surface anchored protein )

Seq: NFDX01000098.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000098, whole genome shotgun sequence (27043 bp)
Overview 1 RT 1: 24911-27043 bp Neighborhood of RT #1 [24911, 27043] Acetyltransf_8 nicotinamidase_related RVT-GII Feature: gene Location: 24911-25447 bp Feature: domain Description: Acetyltransf_8 Location: 24953-25382 bp Feature: domain Description: Acetyltransf_8 Location: 2 4953-2 5382 bp Feature: gene Location: 25482-25997 bp Feature: domain Description: nicotinamidase_related Location: 25494-25944 bp Feature: domain Description: nicotinamidase_related Location: 2 5494-2 5944 bp Feature: gene Location: 26566-27043 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26893-27043 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6893-2 7043 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_8 (pfam13523), nicotinamidase_related (cd01014), RVT-GII

Seq: NFDX01000031.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000031, whole genome shotgun sequence (52022 bp)
Overview 1 RT 1: 48881-51969 bp Neighborhood of RT #1 [48881, 52022] DUF4250 RHH_3 PRK09419 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 48881-49357 bp Feature: domain Description: DUF4250 Location: 48938-49022 bp Feature: domain Description: DUF4250 Location: 4893 8-49022 bp Feature: domain Description: RHH_3 Location: 49199-49328 bp Feature: domain Description: RHH_3 Location: 49199-493 28 bp Feature: gene Location: 49483-50436 bp Feature: domain Description: PRK09419 Location: 49492-50431 bp Feature: domain Description: PRK09419 Location: 49492-5043 1 bp Feature: gene Location: 50553-52022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50559-51249 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50559-51249 bp Feature: domain Description: Intron_maturas2 Location: 51387-51678 bp Feature: domain Description: Intron_maturas2 Location: 513 87-51678 bp Feature: domain Description: HNHc Note: nucleases Location: 51810-51969 bp Feature: domain Description: HNHc Note: nucleases Location: 51810-51969 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4250 (pfam14056), RHH_3 (pfam12651), PRK09419 (multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase/5'-nucleotidase), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDX01000042.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000042, whole genome shotgun sequence (47266 bp)
Overview 1 RT 1: 1-1892 bp Neighborhood of RT #1 [1, 1936] RVT-GII NIPSNAP RimL Feature: gene Location: 1-478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328-478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328-4 78 bp Feature: gene Location: 1047-1367 bp Feature: domain Description: NIPSNAP Location: 1071-1275 bp Feature: domain Description: NIPSNAP Location: 1071-1275 bp Feature: gene Location: 1340-1936 bp Feature: domain Description: RimL Location: 1595-1892 bp Feature: domain Description: RimL Location: 1595-1892 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NIPSNAP (pfam07978), RimL (COG1670), RVT-GII

Seq: NFDX01000113.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000113, whole genome shotgun sequence (73557 bp)
Overview 1 RT 1: 1-3708 bp Neighborhood of RT #1 [1, 3797] RVT-GII Intron_maturas2 HNHc COG4362 BCCT Feature: gene Location: 1-1470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-697 bp Feature: domain Description: Intron_maturas2 Location: 835-1126 bp Feature: domain Description: Intron_maturas2 Location: 835 -1126 bp Feature: domain Description: HNHc Note: nucleases Location: 1258-1417 bp Feature: domain Description: HNHc Note: nucleases Location: 125 8-1417 bp Feature: gene Location: 1581-1868 bp Feature: domain Description: COG4362 Location: 1590-1866 bp Feature: domain Description: COG4362 Location: 15 90-1866 bp Feature: gene Location: 2229-3797 bp Feature: domain Description: BCCT Location: 2265-3708 bp Feature: domain Description: BCCT Location: 2265 -3708 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), COG4362 (Nitric oxide synthase, oxygenase domain ), BCCT (pfam02028)

Seq: NFDX01000038.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000038, whole genome shotgun sequence (5825 bp)
Overview 1 RT 1: 1-2066 bp Neighborhood of RT #1 [1, 2066] RVT-GII NO_synthase Feature: gene Location: 1-478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328-478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328-478 bp Feature: gene Location: 963-1847 bp Feature: domain Description: NO_synthase Location: 975-1752 bp Feature: domain Description: NO_synthase Location: 975-1752 bp Feature: gene Location: 1880-2066 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, NO_synthase (pfam02898)

Seq: NFDX01000037.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000037, whole genome shotgun sequence (41024 bp)
Overview 1 RT 1: 1-1558 bp Neighborhood of RT #1 [1, 1572] RVT-GII Tautomerase_2 YurZ Feature: gene Location: 1-478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328-478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328-47 8 bp Feature: gene Location: 1060-1260 bp Feature: domain Description: Tautomerase_2 Location: 1063-1216 bp Feature: domain Description: Tautomerase_2 Location: 1063-1216 bp Feature: gene Location: 1264-1572 bp Feature: domain Description: YurZ Location: 1279-1558 bp Feature: domain Description: YurZ Location: 127 9-1558 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tautomerase_2 (pfam14552), YurZ (COG0599), RVT-GII

Seq: NFDX01000142.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000142, whole genome shotgun sequence (9356 bp)
Overview 1 RT 1: 5704-9356 bp Neighborhood of RT #1 [5704, 9356] HTH_XRE RVT-GII Feature: gene Location: 5704-6849 bp Feature: gene Location: 7288-7632 bp Feature: domain Description: HTH_XRE Location: 7303-7474 bp Feature: domain Description: HTH_XRE Location: 7303-7474 bp Feature: gene Location: 8879-9356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9206-9356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9206-9356 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-GII

Seq: NFDX01000039.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000039, whole genome shotgun sequence (53743 bp)
Overview 1 RT 1: 1-3791 bp Neighborhood of RT #1 [1, 3820] RVT-GII PRK12896 CcmA Feature: gene Location: 1-478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328-478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328-478 bp Feature: gene Location: 1966-2712 bp Feature: domain Description: PRK12896 Location: 1969-2707 bp Feature: domain Description: PRK1289 6 Location: 19 69 -2707 bp Feature: gene Location: 2918-3820 bp Feature: domain Description: CcmA Location: 2921-3791 bp Feature: domain Description: CcmA Location: 29 21-379 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK12896 (methionine aminopeptidase; Reviewed), CcmA (COG4133)

Seq: NFDX01000036.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000036, whole genome shotgun sequence (18756 bp)
Overview 1 RT 1: 1-2606 bp Neighborhood of RT #1 [1, 2650] RVT-GII glpT MarR Feature: gene Location: 1-478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328-478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328-478 bp Feature: gene Location: 1059-1922 bp Feature: domain Description: glpT Location: 1077-1923 bp Feature: domain Description: glpT Location: 10 77-1923 bp Feature: gene Location: 2192-2650 bp Feature: domain Description: MarR Location: 2252-2606 bp Feature: domain Description: MarR Location: 2252-2606 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT glpT (TIGR00712), RVT-GII, MarR (pfam01047)

Seq: NFDX01000109.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000109, whole genome shotgun sequence (77925 bp)
Overview 1 RT 1: 1-2308 bp Neighborhood of RT #1 [1, 2316] RVT-GII Intron_maturas2 HNHc glpT DUF4027 Feature: gene Location: 1-1470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-697 bp Feature: domain Description: Intron_maturas2 Location: 835-1126 bp Feature: domain Description: Intron_maturas2 Location: 835-11 26 bp Feature: domain Description: HNHc Note: nucleases Location: 1258-1417 bp Feature: domain Description: HNHc Note: nucleases Location: 1258-1417 bp Feature: gene Location: 1575-2072 bp Feature: domain Description: glpT Location: 1593-2064 bp Feature: domain Description: glpT Location: 1593-2064 bp Feature: gene Location: 2191-2316 bp Feature: domain Description: DUF4027 Location: 2203-2308 bp Feature: domain Description: DUF4027 Location: 2203-2308 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), glpT (TIGR00712), DUF4027 (pfam13219)

Seq: NFDX01000183.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000183, whole genome shotgun sequence (91912 bp)
Overview 1 RT 1: 15023-32709 bp 2 RT 2: 35628-41408 bp 3 RT 3: 67609-80454 bp 4 RT 4: 90270-91912 bp Neighborhood of RT #1 [15023, 32709] NlpD Spr RVT-GII Intron_maturas2 HNHc CwlT_like RVT-GII HNHc CwlT_like TrbL TraC-F-type RVT-GII HNHc TraC-F-type Neighborhood of RT #2 [35628, 41408] DUF3854 LPD1 RVT-GII HNHc Neighborhood of RT #3 [67609, 80454] RVT-GII Intron_maturas2 HNHc RVT-GII HNHc RVT-GII GIIM HNHc TraG-D_C Ftsk_gamma Neighborhood of RT #4 [90270, 91912] E1_enzyme_family RVT-GII Feature: gene Location: 15023-15598 bp Feature: gene Location: 15615-16490 bp Feature: domain Description: NlpD Location: 15630-16062 bp Feature: domain Description: NlpD Location: 15630-16062 bp Feature: domain Description: Spr Location: 16095-16431 bp Feature: domain Description: Spr Location: 16095-16431 bp Feature: gene Location: 16650-18473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16914-17748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16914-17748 bp Feature: domain Description: Intron_maturas2 Location: 17817-18156 bp Feature: domain Description: Intron_maturas2 Location: 17817-18156 bp Feature: domain Description: HNHc Note: nucleases Location: 18294-18450 bp Feature: domain Description: HNHc Note: nucleases Location: 18294-18450 bp Feature: gene Location: 19049-19366 bp Feature: domain Description: CwlT_like Location: 19091-19355 bp Feature: domain Description: CwlT_like Location: 19091-19355 bp Feature: gene Location: 19482-21287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19776-20472 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19776-20472 bp Feature: domain Description: HNHc Note: nucleases Location: 21033-21171 bp Feature: domain Description: HNHc Note: nucleases Location: 21033-21171 bp Feature: gene Location: 21961-22959 bp Feature: domain Description: CwlT_like Location: 22813-22936 bp Feature: domain Description: CwlT_like Location: 22813-22936 bp Feature: gene Location: 22956-26960 bp Feature: domain Description: TrbL Location: 23442-23718 bp Feature: domain Description: TrbL Location: 23442-23718 bp Feature: gene Location: 26991-27959 bp Feature: domain Description: TraC-F-type Location: 27018-27798 bp Feature: domain Description: TraC-F-type Location: 27018-27798 bp Feature: gene Location: 28251-30083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28551-29256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28551-29256 bp Feature: domain Description: HNHc Note: nucleases Location: 29835-29967 bp Feature: domain Description: HNHc Note: nucleases Location: 29835-29967 bp Feature: gene Location: 30812-31792 bp Feature: domain Description: TraC-F-type Location: 31241-31715 bp Feature: domain Description: TraC-F-type Location: 312 41-31715 bp Feature: gene Location: 31795-32709 bp Feature: gene Location: 35628-36941 bp Feature: domain Description: DUF3854 Location: 36573-36912 bp Feature: domain Description: DUF3854 Location: 36573-36912 bp Feature: gene Location: 36931-37728 bp Feature: domain Description: LPD1 Location: 37477-37672 bp Feature: domain Description: LPD1 Location: 37477-37672 bp Feature: gene Location: 37800-39596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38094-38790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38094-38790 bp Feature: domain Description: HNHc Note: nucleases Location: 39390-39465 bp Feature: domain Description: HNHc Note: nucleases Location: 39390-39465 bp Feature: gene Location: 39628-39882 bp Feature: gene Location: 40317-41408 bp Feature: gene Location: 67609-67995 bp Feature: gene Location: 68013-69158 bp Feature: gene Location: 69759-71582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70029-70857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70029-70857 bp Feature: domain Description: Intron_maturas2 Location: 70929-71247 bp Feature: domain Description: Intron_maturas2 Location: 70929-712 47 bp Feature: domain Description: HNHc Note: nucleases Location: 71400-71553 bp Feature: domain Description: HNHc Note: nucleases Location: 71400-71553 bp Feature: gene Location: 72549-74339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72846-73542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72846-73542 bp Feature: domain Description: HNHc Note: nucleases Location: 74082-74214 bp Feature: domain Description: HNHc Note: nucleases Location: 74082-74214 bp Feature: gene Location: 74405-74842 bp Feature: gene Location: 75515-77389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75815-76520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75815-76520 bp Feature: domain Description: GIIM Note: maturase Location: 76634-76802 bp Feature: domain Description: GIIM Note: maturase Location: 76634-76802 bp Feature: domain Description: HNHc Note: nucleases Location: 77150-77315 bp Feature: domain Description: HNHc Note: nucleases Location: 77150-77315 bp Feature: gene Location: 77541-79412 bp Feature: domain Description: TraG-D_C Location: 77634-77949 bp Feature: domain Description: TraG-D_C Location: 77634-77949 bp Feature: domain Description: Ftsk_gamma Location: 78357-78537 bp Feature: domain Description: Ftsk_gamma Location: 78357-78537 bp Feature: gene Location: 79684-80454 bp Feature: gene Location: 90270-90671 bp Feature: gene Location: 90684-90866 bp Feature: domain Description: E1_enzyme_family Location: 90732-90849 bp Feature: domain Description: E1_enzyme_family Location: 90732-90849 bp Feature: gene Location: 91435-91912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91762-91912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91762-91912 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NlpD (COG0739), Spr (COG0791), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), CwlT_like, TrbL (pfam04610), TraC-F-type (TIGR02746), DUF3854 (pfam12965), LPD1 (pfam18796)
GIIM (pfam08388), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), E1_enzyme_family (cl22428)

Seq: NFDX01000168.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000168, whole genome shotgun sequence (90453 bp)
Overview 1 RT 1: 1-3161 bp Neighborhood of RT #1 [1, 3535] RVT-GII Intron_maturas2 HNHc DUF2812 zf-HC2 DUF4179 Feature: gene Location: 1-1470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-697 bp Feature: domain Description: Intron_maturas2 Location: 835-1126 bp Feature: domain Description: Intron_maturas2 Location: 835-1126 bp Feature: domain Description: HNHc Note: nucleases Location: 1258-1417 bp Feature: domain Description: HNHc Note: nucleases Location: 1258-1417 bp Feature: gene Location: 1630-2181 bp Feature: domain Description: DUF2812 Location: 1633-1927 bp Feature: domain Description: DUF2812 Location: 1633-1927 bp Feature: gene Location: 2558-3535 bp Feature: domain Description: zf-HC2 Location: 2591-2666 bp Feature: domain Description: zf-HC2 Location: 2591-2666 bp Feature: domain Description: DUF4179 Location: 2870-3161 bp Feature: domain Description: DUF4179 Location: 2870-3161 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF2812 (pfam11193), zf-HC2 (pfam13490), DUF4179 (pfam13786)

Seq: NFDX01000106.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000106, whole genome shotgun sequence (159863 bp)
Overview 1 RT 1: 1-2627 bp 2 RT 2: 156098-159863 bp Neighborhood of RT #1 [1, 2627] RVT-GII Intron_maturas2 HNHc Neighborhood of RT #2 [156098, 159863] CwlA SH3_3 SLH SLH SLH RVT-GII Feature: gene Location: 1-1470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-697 bp Feature: domain Description: Intron_maturas2 Location: 835-1126 bp Feature: domain Description: Intron_maturas2 Location: 835-1126 bp Feature: domain Description: HNHc Note: nucleases Location: 1258-1417 bp Feature: domain Description: HNHc Note: nucleases Location: 1258-14 17 bp Feature: gene Location: 1587-1844 bp Feature: gene Location: 2349-2627 bp Feature: gene Location: 156098-156556 bp Feature: gene Location: 157363-158670 bp Feature: domain Description: CwlA Location: 157402-157894 bp Feature: domain Description: CwlA Location: 157402-157894 bp Feature: domain Description: SH3_3 Location: 157954-158080 bp Feature: domain Description: SH3_3 Location: 157954-158080 bp Feature: domain Description: SLH Location: 158152-158269 bp Feature: domain Description: SLH Location: 158152-158269 bp Feature: domain Description: SLH Location: 158314-158443 bp Feature: domain Description: SLH Location: 158314 -158443 bp Feature: domain Description: SLH Location: 158506-158632 bp Feature: domain Description: SLH Location: 158506-158632 bp Feature: gene Location: 159449-159863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 159713-159863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 159713-159863 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), CwlA (COG5632), SH3_3 (pfam08239), SLH (pfam00395)

Seq: NFDX01000170.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000170, whole genome shotgun sequence (4840 bp)
Overview 1 RT 1: 362-3978 bp Neighborhood of RT #1 [362, 3978] doc_partner Doc RVT-GII GIIM Feature: gene Location: 362-646 bp Feature: domain Description: doc_partner Location: 407-638 bp Feature: domain Description: doc_partner Location: 407-638 bp Feature: gene Location: 684-1085 bp Feature: domain Description: Doc Location: 699-1071 bp Feature: domain Description: Doc Location: 699-1071 bp Feature: gene Location: 1166-2440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1367-1982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1367-1982 bp Feature: domain Description: GIIM Note: maturase Location: 2042-2249 bp Feature: domain Description: GIIM Note: maturase Location: 2042-2249 bp Feature: gene Location: 3038-3622 bp Feature: gene Location: 3724-3978 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), doc_partner (TIGR02609), Doc (COG3654)

Seq: NFDX01000051.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000051, whole genome shotgun sequence (18827 bp)
Overview 1 RT 1: 16515-18827 bp Neighborhood of RT #1 [16515, 18827] DegV RVT-GII Feature: gene Location: 16515-17321 bp Feature: domain Description: DegV Location: 16536-17319 bp Feature: domain Description: DegV Location: 16 536-17319 bp Feature: gene Location: 17614-17769 bp Feature: gene Location: 18350-18827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18677-18827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18677-18827 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DegV (TIGR00762), RVT-GII

Seq: NFDX01000040.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000040, whole genome shotgun sequence (42594 bp)
Overview 1 RT 1: 1-1803 bp Neighborhood of RT #1 [1, 1803] RVT-GII PadR Feature: gene Location: 1-478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328-478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328-478 bp Feature: gene Location: 1089-1403 bp Feature: domain Description: PadR Location: 1137-1347 bp Feature: domain Description: PadR Location: 1137-1347 bp Feature: gene Location: 1558-1803 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PadR (pfam03551), RVT-GII

Seq: NFDX01000083.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000083, whole genome shotgun sequence (70831 bp)
Overview 1 RT 1: 68136-70778 bp Neighborhood of RT #1 [68136, 70831] EFh_HEF_SCGN RVT-GII Intron_maturas2 HNHc Feature: gene Location: 68136-68252 bp Feature: gene Location: 68718-69200 bp Feature: domain Description: EFh_HEF_SCGN Location: 68796-69051 bp Feature: domain Description: EFh_HEF_SCGN Location: 68796-69051 bp Feature: gene Location: 69362-70831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69368-70058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69368-70058 bp Feature: domain Description: Intron_maturas2 Location: 70196-70487 bp Feature: domain Description: Intron_maturas2 Location: 70196-70487 bp Feature: domain Description: HNHc Note: nucleases Location: 70619-70778 bp Feature: domain Description: HNHc Note: nucleases Location: 70619-70778 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EFh_HEF_SCGN (cd16178), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDX01000081.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000081, whole genome shotgun sequence (5081 bp)
Overview 1 RT 1: 1595-5081 bp Neighborhood of RT #1 [1595, 5081] Chondroitinas_B Bacillus_HBL RVT-GII Feature: gene Location: 1595-2119 bp Feature: domain Description: Chondroitinas_B Location: 1793-2033 bp Feature: domain Description: Chondroitinas_B Location: 1793-2033 bp Feature: gene Location: 3487-4023 bp Feature: domain Description: Bacillus_HBL Location: 3604-4021 bp Feature: domain Description: Bacillus_HBL Location: 3604-4021 bp Feature: gene Location: 4604-5081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4931-5081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4931-5081 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Chondroitinas_B (pfam14592), Bacillus_HBL (pfam05791), RVT-GII

Seq: NFDX01000112.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000112, whole genome shotgun sequence (17494 bp)
Overview 1 RT 1: 1-3135 bp Neighborhood of RT #1 [1, 3263] RVT-GII Intron_maturas2 HNHc DUF2512 SIR2-like Feature: gene Location: 1-1470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-697 bp Feature: domain Description: Intron_maturas2 Location: 835-1126 bp Feature: domain Description: Intron_maturas2 Location: 835-1126 bp Feature: domain Description: HNHc Note: nucleases Location: 1258-1417 bp Feature: domain Description: HNHc Note: nucleases Location: 1258-1417 bp Feature: gene Location: 1763-2200 bp Feature: domain Description: DUF2512 Location: 1772-2168 bp Feature: domain Description: DUF2512 Location: 1772-2168 bp Feature: gene Location: 2352-3263 bp Feature: domain Description: SIR2-like Location: 2442-3135 bp Feature: domain Description: SIR2-like Location: 2442-3135 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF2512 (pfam10710), SIR2-like (cd01406)

Seq: NFDX01000165.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000165, whole genome shotgun sequence (10516 bp)
Overview 1 RT 1: 1-2076 bp Neighborhood of RT #1 [1, 2076] RVT-GII FtsK_SpoIIIE Feature: gene Location: 1-478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328-478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328-478 bp Feature: gene Location: 1047-1778 bp Feature: domain Description: FtsK_SpoIIIE Location: 1425-1755 bp Feature: domain Description: FtsK_SpoIIIE Location: 1425-1755 bp Feature: gene Location: 1894-2076 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FtsK_SpoIIIE (pfam01580), RVT-GII

Seq: NFDX01000111.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000111, whole genome shotgun sequence (98609 bp)
Overview 1 RT 1: 1-3293 bp 2 RT 2: 94830-98556 bp Neighborhood of RT #1 [1, 3586] RVT-GII Intron_maturas2 HNHc DUF4879 HTH_MerR-like_sg1 UbiE Neighborhood of RT #2 [94830, 98609] AcoR RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1-1470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-697 bp Feature: domain Description: Intron_maturas2 Location: 835-1126 bp Feature: domain Description: Intron_maturas2 Location: 835-1126 bp Feature: domain Description: HNHc Note: nucleases Location: 1258-1417 bp Feature: domain Description: HNHc Note: nucleases Location: 1258-1417 bp Feature: gene Location: 1587-1856 bp Feature: domain Description: DUF4879 Location: 1602-1851 bp Feature: domain Description: DUF4879 Location: 1602-1851 bp Feature: gene Location: 2363-3586 bp Feature: domain Description: HTH_MerR-like_sg1 Location: 2366-2678 bp Feature: domain Description: HTH_MerR-like_sg1 Location: 2366-2678 bp Feature: domain Description: UbiE Location: 3023-3293 bp Feature: domain Description: UbiE Location: 3023-3293 bp Feature: gene Location: 94830-96680 bp Feature: domain Description: AcoR Location: 94854-96678 bp Feature: domain Description: AcoR Location: 94854-96678 bp Feature: gene Location: 96803-96916 bp Feature: gene Location: 97140-98609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97146-97836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97146-97836 bp Feature: domain Description: Intron_maturas2 Location: 97974-98265 bp Feature: domain Description: Intron_maturas2 Location: 97974-98265 bp Feature: domain Description: HNHc Note: nucleases Location: 98397-98556 bp Feature: domain Description: HNHc Note: nucleases Location: 98397-98556 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF4879 (pfam16219), HTH_MerR-like_sg1 (cd04777), UbiE (COG2226), AcoR (COG3284)

Seq: NFDX01000043.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000043, whole genome shotgun sequence (122940 bp)
Overview 1 RT 1: 1-2736 bp Neighborhood of RT #1 [1, 2780] RVT-GII B_an_ocin Feature: gene Location: 1-478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328-478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328-478 bp Feature: gene Location: 1479-1964 bp Feature: gene Location: 2454-2780 bp Feature: domain Description: B_an_ocin Location: 2463-2736 bp Feature: domain Description: B_an_ocin Location: 2463-2736 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, B_an_ocin (TIGR03601)

Seq: NFDX01000044.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000044, whole genome shotgun sequence (50435 bp)
Overview 1 RT 1: 1-2844 bp 2 RT 2: 9824-17053 bp 3 RT 3: 47781-50382 bp Neighborhood of RT #1 [1, 2915] RVT-GII LolE LolD Neighborhood of RT #2 [9824, 17053] KOG1000 KOG1000 RVT-GII GIIM Neighborhood of RT #3 [47781, 50435] PRTRC_ThiF RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1-415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 265-415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 265-415 bp Feature: gene Location: 1004-2155 bp Feature: domain Description: LolE Location: 1016-2102 bp Feature: domain Description: LolE Location: 1016-2102 bp Feature: gene Location: 2163-2915 bp Feature: domain Description: LolD Location: 2178-2844 bp Feature: domain Description: LolD Location: 2178-2844 bp Feature: gene Location: 9824-10537 bp Feature: gene Location: 10554-12959 bp Feature: domain Description: KOG1000 Location: 11265-11481 bp Feature: domain Description: KOG1000 Location: 11265-11481 bp Feature: domain Description: KOG1000 Location: 12084-12417 bp Feature: domain Description: KOG1000 Location: 12084-124 17 bp Feature: gene Location: 13234-15099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13534-14239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13534-14239 bp Feature: domain Description: GIIM Note: maturase Location: 14326-14509 bp Feature: domain Description: GIIM Note: maturase Location: 14326-14509 bp Feature: gene Location: 15861-16754 bp Feature: gene Location: 16826-17053 bp Feature: gene Location: 47781-48152 bp Feature: gene Location: 48172-48714 bp Feature: domain Description: PRTRC_ThiF Location: 48235-48691 bp Feature: domain Description: PRTRC_ThiF Location: 48235-48691 bp Feature: gene Location: 48966-50435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48972-49662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48972-49662 bp Feature: domain Description: Intron_maturas2 Location: 49800-50091 bp Feature: domain Description: Intron_maturas2 Location: 49800-50091 bp Feature: domain Description: HNHc Note: nucleases Location: 50223-50382 bp Feature: domain Description: HNHc Note: nucleases Location: 50223-50382 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LolE (COG4591), RVT-GII, LolD (COG1136), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), GIIM (pfam08388), PRTRC_ThiF (TIGR03736), Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDX01000150.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000150, whole genome shotgun sequence (4335 bp)
Overview 1 RT 1: 676-4282 bp Neighborhood of RT #1 [676, 4335] Bacillus_HBL RVT-GII Intron_maturas2 HNHc Feature: gene Location: 676-1905 bp Feature: domain Description: Bacillus_HBL Location: 811-1363 bp Feature: domain Description: Bacillus_HBL Location: 811-1363 bp Feature: gene Location: 1967-2746 bp Feature: gene Location: 2866-4335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2872-3562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2872-3562 bp Feature: domain Description: Intron_maturas2 Location: 3700-3991 bp Feature: domain Description: Intron_maturas2 Location: 3700-3991 bp Feature: domain Description: HNHc Note: nucleases Location: 4123-4282 bp Feature: domain Description: HNHc Note: nucleases Location: 4123-4282 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Bacillus_HBL (pfam05791)

Seq: NFDX01000091.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000091, whole genome shotgun sequence (12637 bp)
Overview 1 RT 1: 9892-12637 bp Neighborhood of RT #1 [9892, 12637] thiol_BshB2 PRK06172 RVT-GII Feature: gene Location: 9892-10554 bp Feature: domain Description: thiol_BshB2 Location: 9901-10549 bp Feature: domain Description: thiol_BshB2 Location: 9901-10549 bp Feature: gene Location: 10667-11410 bp Feature: domain Description: PRK06172 Location: 10670-11405 bp Feature: domain Description: PRK06172 Location: 10670-11405 bp Feature: gene Location: 12160-12637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12487-12637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12487-126 37 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06172 (SDR family oxidoreductase), RVT-GII, thiol_BshB2 (TIGR04000)

Seq: NFDX01000028.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000028, whole genome shotgun sequence (3603 bp)
Overview 1 RT 1: 56-3550 bp Neighborhood of RT #1 [56, 3603] HTH_28 HTH_28 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 56-1410 bp Feature: domain Description: HTH_28 Location: 80-218 bp Feature: domain Description: HTH_28 Location: 80-218 bp Feature: domain Description: HTH_28 Location: 245-404 bp Feature: domain Description: HTH_28 Location: 245-404 bp Feature: gene Location: 1444-2001 bp Feature: gene Location: 2134-3603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2140-2830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2140-2830 bp Feature: domain Description: Intron_maturas2 Location: 2968-3259 bp Feature: domain Description: Intron_maturas2 Location: 2968-3259 bp Feature: domain Description: HNHc Note: nucleases Location: 3391-3550 bp Feature: domain Description: HNHc Note: nucleases Location: 3391-3550 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), HTH_28 (pfam13518)

Seq: NFDX01000029.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000029, whole genome shotgun sequence (41912 bp)
Overview 1 RT 1: 12490-17096 bp Neighborhood of RT #1 [12490, 17143] RVT-GII HNHc PRK03113 Feature: gene Location: 12490-12690 bp Feature: gene Location: 12766-13002 bp Feature: gene Location: 13788-15695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14088-14799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14088-14799 bp Feature: domain Description: HNHc Note: nucleases Location: 15390-15540 bp Feature: domain Description: HNHc Note: nucleases Location: 15390-15540 bp Feature: gene Location: 15917-16672 bp Feature: gene Location: 16706-17143 bp Feature: domain Description: PRK03113 Location: 16724-17096 bp Feature: domain Description: PRK03113 Location: 16724-17096 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), PRK03113 (putative disulfide oxidoreductase; Provisional)

Seq: NFDX01000056.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000056, whole genome shotgun sequence (42484 bp)
Overview 1 RT 1: 39509-42484 bp Neighborhood of RT #1 [39509, 42484] AcrR MFS_MefA_like RVT-GII Feature: gene Location: 39509-40144 bp Feature: domain Description: AcrR Location: 39533-39983 bp Feature: domain Description: AcrR Location: 39533-39983 bp Feature: gene Location: 40191-41438 bp Feature: domain Description: MFS_MefA_like Location: 40245-41418 bp Feature: domain Description: MFS_MefA_like Location: 40245-41418 bp Feature: gene Location: 42007-42484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42334-42484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42334-42484 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), MFS_MefA_like (cd06173), RVT-GII

Seq: NFDX01000052.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000052, whole genome shotgun sequence (37110 bp)
Overview 1 RT 1: 32273-37057 bp Neighborhood of RT #1 [32273, 37110] DUF3959 pPIWI_RE_X MID_pPIWI_RE RNaseH_pPIWI_RE RVT-GII Intron_maturas2 HNHc Feature: gene Location: 32273-33040 bp Feature: domain Description: DUF3959 Location: 32300-33026 bp Feature: domain Description: DUF3959 Location: 3230 0-330 26 bp Feature: gene Location: 33248-35530 bp Feature: domain Description: pPIWI_RE_X Location: 33275-34199 bp Feature: domain Description: pPIWI_RE_X Location: 33275-34199 bp Feature: domain Description: MID_pPIWI_RE Location: 34397-34709 bp Feature: domain Description: MID_pPIWI_RE Location: 34397-34709 bp Feature: domain Description: RNaseH_pPIWI_RE Location: 34775-35438 bp Feature: domain Description: RNaseH_pPIWI_RE Location: 34775-35438 bp Feature: gene Location: 35641-37110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35647-36337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35647-36337 bp Feature: domain Description: Intron_maturas2 Location: 36475-36766 bp Feature: domain Description: Intron_maturas2 Location: 36475-36766 bp Feature: domain Description: HNHc Note: nucleases Location: 36898-37057 bp Feature: domain Description: HNHc Note: nucleases Location: 36898-37057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3959 (pfam13105), pPIWI_RE_X, MID_pPIWI_RE (pfam18157), RNaseH_pPIWI_RE, RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDX01000107.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000107, whole genome shotgun sequence (17865 bp)
Overview 1 RT 1: 1-2384 bp Neighborhood of RT #1 [1, 2389] RVT-GII Intron_maturas2 HNHc DUF4865 Feature: gene Location: 1-1470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-697 bp Feature: domain Description: Intron_maturas2 Location: 835-1126 bp Feature: domain Description: Intron_maturas2 Location: 835-1126 bp Feature: domain Description: HNHc Note: nucleases Location: 1258-1417 bp Feature: domain Description: HNHc Note: nucleases Location: 1258-1417 bp Feature: gene Location: 1586-1798 bp Feature: gene Location: 1841-2389 bp Feature: domain Description: DUF4865 Location: 1844-2384 bp Feature: domain Description: DUF4865 Location: 1844-2384 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF4865 (pfam16157)

Seq: NFDX01000087.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000087, whole genome shotgun sequence (30684 bp)
Overview 1 RT 1: 28075-30631 bp Neighborhood of RT #1 [28075, 30684] Replic_Relax T7_EssCb_Firm RVT-GII Intron_maturas2 HNHc Feature: gene Location: 28075-28695 bp Feature: domain Description: Replic_Relax Location: 28123-28588 bp Feature: domain Description: Replic_Relax Location: 28123-28588 bp Feature: gene Location: 28637-29098 bp Feature: domain Description: T7_EssCb_Firm Location: 28655-28955 bp Feature: domain Description: T7_EssCb_Firm Location: 28655-28955 bp Feature: gene Location: 29215-30684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29221-29911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29221-29911 bp Feature: domain Description: Intron_maturas2 Location: 30049-30340 bp Feature: domain Description: Intron_maturas2 Location: 30049-30340 bp Feature: domain Description: HNHc Note: nucleases Location: 30472-30631 bp Feature: domain Description: HNHc Note: nucleases Location: 30472-30631 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Replic_Relax (pfam13814), T7_EssCb_Firm (TIGR03928), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFDX01000110.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000110, whole genome shotgun sequence (38822 bp)
Overview 1 RT 1: 1-2612 bp Neighborhood of RT #1 [1, 2683] RVT-GII Intron_maturas2 HNHc DnaD_dom Feature: gene Location: 1-1470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-697 bp Feature: domain Description: Intron_maturas2 Location: 835-1126 bp Feature: domain Description: Intron_maturas2 Location: 835-1126 bp Feature: domain Description: HNHc Note: nucleases Location: 1258-1417 bp Feature: domain Description: HNHc Note: nucleases Location: 1258-1417 bp Feature: gene Location: 1685-1811 bp Feature: gene Location: 1901-2683 bp Feature: domain Description: DnaD_dom Location: 2429-2612 bp Feature: domain Description: DnaD_dom Location: 2429-2612 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DnaD_dom (TIGR01446)

Seq: NFDX01000041.1 Bacillus thuringiensis serovar aizawai strain BGSC 4J4 4J4_contig000041, whole genome shotgun sequence (160786 bp)
Overview 1 RT 1: 1-2151 bp 2 RT 2: 156690-160733 bp Neighborhood of RT #1 [1, 2159] RVT-GII MPP_YhcR_N DUF3886 Neighborhood of RT #2 [156690, 160786] PRK13670 Arm-DNA-bind_4 Phage_int_SAM_3 INT_ICEBs1_C_like RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1-415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 265-415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 265-415 bp Feature: gene Location: 1059-1694 bp Feature: domain Description: MPP_YhcR_N Location: 1173-1695 bp Feature: domain Description: MPP_YhcR_N Location: 1173-1695 bp Feature: gene Location: 1896-2159 bp Feature: domain Description: DUF3886 Location: 1953-2151 bp Feature: domain Description: DUF3886 Location: 1953-2151 bp Feature: gene Location: 156690-157916 bp Feature: domain Description: PRK13670 Location: 156693-157887 bp Feature: domain Description: PRK13670 Location: 156693-157887 bp Feature: gene Location: 158066-159196 bp Feature: domain Description: Arm-DNA-bind_4 Location: 158096-158228 bp Feature: domain Description: Arm-DNA-bind_4 Location: 158096-158228 bp Feature: domain Description: Phage_int_SAM_3 Location: 158255-158423 bp Feature: domain Description: Phage_int_SAM_3 Location: 158255-158423 bp Feature: domain Description: INT_ICEBs1_C_like Location: 158582-159089 bp Feature: domain Description: INT_ICEBs1_C_like Location: 158582-159089 bp Feature: gene Location: 159317-160786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 159323-160013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 159323-160013 bp Feature: domain Description: Intron_maturas2 Location: 160151-160442 bp Feature: domain Description: Intron_maturas2 Location: 160151-160442 bp Feature: domain Description: HNHc Note: nucleases Location: 160574-160733 bp Feature: domain Description: HNHc Note: nucleases Location: 160574-160733 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MPP_YhcR_N (cd07412), RVT-GII, DUF3886 (pfam13025), PRK13670 (nucleotidyltransferase), Arm-DNA-bind_4 (pfam14657), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), Intron_maturas2 (pfam01348), HNHc (smart00507)