myRT

myRT report for GCA_002147295.1_ASM214729v1

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Seq: NFEA01000021.1 Bacillus thuringiensis serovar darmstadiensis strain BGSC 4M3 4M3_contig000021, whole genome shotgun sequence (19776 bp)
Overview 1 RT 1: 7631-16974 bp Neighborhood of RT #1 [7631, 16982] groES groEL RVT-UG8 RVT-UG3 guaA AzgA Feature: gene Location: 7631-7915 bp Ori: OTZ36105.1 Feature: domain Description: groES Location: 7634-7910 bp Feature: domain Description: groES Location: 7634-791 0 bp Feature: gene Location: 7954-9588 bp Ori: OTZ36106.1 Feature: domain Description: groEL Location: 7957-9574 bp Feature: domain Description: groEL Location: 7957-9574 bp Feature: gene Location: 9792-11705 bp Ori: OTZ36107.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 10266-10731 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 0266-1 0731 bp Feature: gene Location: 12054-13208 bp Ori: OTZ36108.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 12249-12702 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 2249-1 2702 bp Feature: gene Location: 13725-15272 bp Ori: OTZ36109.1 Feature: domain Description: guaA Location: 13746-15270 bp Feature: domain Description: guaA Location: 1 3746-1 5270 bp Feature: gene Location: 15657-16982 bp Ori: OTZ36110.1 Feature: domain Description: AzgA Location: 15660-16974 bp Feature: domain Description: AzgA Location: 1 5660-1 6974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groES (PRK14533), groEL (PRK12852), RVT-UG8, RVT-UG3, guaA (PRK00074), AzgA (COG2252)

Seq: NFEA01000035.1 Bacillus thuringiensis serovar darmstadiensis strain BGSC 4M3 4M3_contig000035, whole genome shotgun sequence (184577 bp)
Overview 1 RT 1: 48001-52095 bp 2 RT 2: 72091-78199 bp 3 RT 3: 105713-119180 bp 4 RT 4: 129307-135214 bp Neighborhood of RT #1 [48001, 52112] RadC RVT-GII HNHc RadC Neighborhood of RT #2 [72091, 78294] AAA_10 RVT-GII HNHc AAA_10 TcpE Neighborhood of RT #3 [105713, 119209] HTH_XRE RVT-GII DUF3854 RpoD RVT-GII HNHc LPD1 holA Neighborhood of RT #4 [129307, 135214] PRTRC_A E1_enzyme_family RVT-GII HNHc Feature: gene Location: 48001-48737 bp Feature: gene Location: 48873-49055 bp Ori: OTZ33520.1 Feature: domain Description: RadC Location: 48912-49047 bp Feature: domain Description: RadC Location: 48912 -49047 bp Feature: gene Location: 49166-51079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49493-50234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49493-502 34 bp Feature: domain Description: HNHc Note: nucleases Location: 50798-50966 bp Feature: domain Description: HNHc Note: nucleases Location: 50798-50966 bp Feature: gene Location: 51268-51447 bp Feature: gene Location: 51792-52112 bp Ori: OTZ33628.1 Feature: domain Description: RadC Location: 51798-52095 bp Feature: domain Description: RadC Location: 51798-52 095 bp Feature: gene Location: 72091-72573 bp Feature: gene Location: 72575-73594 bp Feature: domain Description: AAA_10 Location: 72581-73478 bp Feature: domain Description: AAA_10 Location: 72 581-73478 bp Feature: gene Location: 73711-75579 bp Ori: OTZ33537.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74011-74716 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74011-74716 bp Feature: domain Description: HNHc Note: nucleases Location: 75295-75427 bp Feature: domain Description: HNHc Note: nucleases Location: 752 95-7542 7 bp Feature: gene Location: 76295-77830 bp Ori: OTZ33538.1 Feature: domain Description: AAA_10 Location: 77636-77813 bp Feature: domain Description: AAA_10 Location: 77636-77813 bp Feature: gene Location: 77890-78294 bp Ori: OTZ33539.1 Feature: domain Description: TcpE Location: 77926-78199 bp Feature: domain Description: TcpE Location: 7792 6-78199 bp Feature: gene Location: 105713-105955 bp Ori: OTZ33557.1 Feature: domain Description: HTH_XRE Location: 105782-105920 bp Feature: domain Description: HTH_XRE Location: 105782 -10592 0 bp Feature: gene Location: 105957-107507 bp Feature: gene Location: 108549-110389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108861-109089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108861-109089 bp Feature: gene Location: 110424-111665 bp Ori: OTZ33630.1 Feature: domain Description: DUF3854 Location: 111312-111633 bp Feature: domain Description: DUF3854 Location: 111312 -111633 bp Feature: gene Location: 112157-112387 bp Feature: gene Location: 112410-113381 bp Ori: OTZ33560.1 Feature: domain Description: RpoD Location: 112503-113322 bp Feature: domain Description: RpoD Location: 112 503-11332 2 bp Feature: gene Location: 113562-114641 bp Feature: gene Location: 115337-117316 bp Ori: OTZ33561.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115679-116375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115679-116375 bp Feature: domain Description: HNHc Note: nucleases Location: 117035-117167 bp Feature: domain Description: HNHc Note: nucleases Location: 117035-117167 bp Feature: gene Location: 117520-118188 bp Ori: OTZ33562.1 Feature: domain Description: LPD1 Location: 117865-118066 bp Feature: domain Description: LPD1 Location: 117865-118066 bp Feature: gene Location: 118214-119209 bp Ori: OTZ33563.1 Feature: domain Description: holA Location: 118220-119180 bp Feature: domain Description: holA Location: 1182 2 0-119180 bp Feature: gene Location: 129307-130302 bp Ori: OTZ33574.1 Feature: domain Description: PRTRC_A Location: 129841-130180 bp Feature: domain Description: PRTRC_A Location: 12 9841-130180 bp Feature: gene Location: 130299-130700 bp Ori: OTZ33575.1 Feature: domain Description: E1_enzyme_family Location: 130347-130683 bp Feature: domain Description: E1_enzyme_family Location: 130347-130683 bp Feature: gene Location: 131400-133280 bp Ori: OTZ33576.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 131730-132459 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 131730-132 459 bp Feature: domain Description: HNHc Note: nucleases Location: 133017-133167 bp Feature: domain Description: HNHc Note: nucleases Location: 133017-133167 bp Feature: gene Location: 133344-133871 bp Feature: gene Location: 134243-135214 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RadC (pfam04002), RVT-GII, HNHc (smart00507), AAA_10 (pfam12846), TcpE (pfam12648), HTH_XRE (smart00530), DUF3854 (pfam12965), RpoD (COG0568), LPD1 (pfam18796), holA (TIGR01128)
PRTRC_A (TIGR03735), E1_enzyme_family (cl22428)