myRT

myRT report for GCA_002147375.1_ASM214737v1

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Seq: NFEE01000150.1 Bacillus thuringiensis serovar wuhanensis strain BGSC 4T1 4T1_contig000150, whole genome shotgun sequence (7738 bp)
Overview 1 RT 1: 691-7633 bp Neighborhood of RT #1 [691, 7662] TraG-D_C Ftsk_gamma RVT-GII GIIM RVT-GII Intron_maturas2 HNHc Feature: gene Location: 691-918 bp Feature: gene Location: 1077-2762 bp Feature: domain Description: TraG-D_C Location: 1092-1410 bp Feature: domain Description: TraG-D_C Location: 1 092-1 41 0 bp Feature: domain Description: Ftsk_gamma Location: 1815-1995 bp Feature: domain Description: Ftsk_gamma Location: 1 81 5-1 995 bp Feature: gene Location: 2992-4866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3292-3997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3292-3997 bp Feature: domain Description: GIIM Note: maturase Location: 4111-4279 bp Feature: domain Description: GIIM Note: maturase Location: 41 1 1 -4279 bp Feature: gene Location: 5538-5744 bp Feature: gene Location: 5845-7662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6115-6937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 1 5-6937 bp Feature: domain Description: Intron_maturas2 Location: 7018-7312 bp Feature: domain Description: Intron_maturas2 Location: 701 8-731 2 bp Feature: domain Description: HNHc Note: nucleases Location: 7459-7633 bp Feature: domain Description: HNHc Note: nucleases Location: 7459-7633 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), Ftsk_gamma (smart00843), RVT-GII, GIIM (pfam08388), Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEE01000041.1 Bacillus thuringiensis serovar wuhanensis strain BGSC 4T1 4T1_contig000041, whole genome shotgun sequence (21497 bp)
Overview 1 RT 1: 16255-21202 bp Neighborhood of RT #1 [16255, 21202] Glyco_hydro_8 EamA EamA RVT-GII Feature: gene Location: 16255-17616 bp Feature: domain Description: Glyco_hydro_8 Location: 16501-17527 bp Feature: domain Description: Glyco_hydro_8 Location: 16501-1752 7 bp Feature: gene Location: 17755-18582 bp Feature: domain Description: EamA Location: 17761-18094 bp Feature: domain Description: EamA Location: 17761-18094 bp Feature: domain Description: EamA Location: 18124-18520 bp Feature: domain Description: EamA Location: 1812 4-1852 0 bp Feature: gene Location: 18786-20717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19107-19842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19107-19842 bp Feature: gene Location: 20714-20917 bp Feature: gene Location: 20999-21202 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glyco_hydro_8 (pfam01270), EamA (pfam00892), RVT-GII

Seq: NFEE01000104.1 Bacillus thuringiensis serovar wuhanensis strain BGSC 4T1 4T1_contig000104, whole genome shotgun sequence (18205 bp)
Overview 1 RT 1: 3005-9738 bp Neighborhood of RT #1 [3005, 9746] YxeA Lysozyme_like RVT-GII Intron_maturas2 HNHc RimL MgtE Feature: gene Location: 3005-3373 bp Feature: domain Description: YxeA Location: 3056-3362 bp Feature: domain Description: YxeA Location: 3 056-3 3 62 bp Feature: gene Location: 3800-4381 bp Feature: domain Description: Lysozyme_like Location: 3935-4370 bp Feature: domain Description: Lysozyme_like Location: 3 93 5-43 70 bp Feature: gene Location: 4957-6780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5221-6055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5221-6055 bp Feature: domain Description: Intron_maturas2 Location: 6124-6463 bp Feature: domain Description: Intron_maturas2 Location: 6124-6463 bp Feature: domain Description: HNHc Note: nucleases Location: 6601-6757 bp Feature: domain Description: HNHc Note: nucleases Location: 6601-6757 bp Feature: gene Location: 7277-7783 bp Feature: domain Description: RimL Location: 7286-7781 bp Feature: domain Description: RimL Location: 7286-7781 bp Feature: gene Location: 8418-9746 bp Feature: domain Description: MgtE Location: 8433-9738 bp Feature: domain Description: MgtE Location: 843 3 -973 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YxeA (COG5294), Lysozyme_like (pfam13702), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), RimL (COG1670), MgtE (pfam01769)

Seq: NFEE01000013.1 Bacillus thuringiensis serovar wuhanensis strain BGSC 4T1 4T1_contig000013, whole genome shotgun sequence (5014 bp)
Overview 1 RT 1: 1492-4909 bp Neighborhood of RT #1 [1492, 4938] prsA RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1492-1762 bp Feature: gene Location: 1955-2806 bp Feature: domain Description: prsA Location: 1958-2804 bp Feature: domain Description: prsA Location: 1958-2804 bp Feature: gene Location: 3121-4938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3391-4213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3391-4 213 bp Feature: domain Description: Intron_maturas2 Location: 4294-4588 bp Feature: domain Description: Intron_maturas2 Location: 4 294 -4 588 bp Feature: domain Description: HNHc Note: nucleases Location: 4735-4909 bp Feature: domain Description: HNHc Note: nucleases Location: 4 735-4 909 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prsA (PRK04405), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEE01000047.1 Bacillus thuringiensis serovar wuhanensis strain BGSC 4T1 4T1_contig000047, whole genome shotgun sequence (21780 bp)
Overview 1 RT 1: 5901-12779 bp Neighborhood of RT #1 [5901, 12779] DEXDc RVT-GII Intron_maturas2 HNHc SF2_C_SNF Feature: gene Location: 5901-6128 bp Feature: gene Location: 6200-7954 bp Feature: domain Description: DEXDc Location: 6980-7931 bp Feature: domain Description: DEXDc Location: 6980-7931 bp Feature: gene Location: 8558-10393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8825-9656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8825 -965 6 bp Feature: domain Description: Intron_maturas2 Location: 9725-10100 bp Feature: domain Description: Intron_maturas2 Location: 9725 -10100 bp Feature: domain Description: HNHc Note: nucleases Location: 10193-10340 bp Feature: domain Description: HNHc Note: nucleases Location: 10193-10340 bp Feature: gene Location: 10394-12049 bp Feature: domain Description: SF2_C_SNF Location: 11198-11441 bp Feature: domain Description: SF2_C_SNF Location: 11198-11441 bp Feature: gene Location: 12066-12779 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SF2_C_SNF (cd18793), DEXDc (smart00487), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEE01000015.1 Bacillus thuringiensis serovar wuhanensis strain BGSC 4T1 4T1_contig000015, whole genome shotgun sequence (27739 bp)
Overview 1 RT 1: 77-2786 bp Neighborhood of RT #1 [77, 2788] RVT-GII Intron_maturas2 HNHc PRK13660 PRK14127 Feature: gene Location: 77-1894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347-1169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347-116 9 bp Feature: domain Description: Intron_maturas2 Location: 1250-1544 bp Feature: domain Description: Intron_maturas2 Location: 1250-1544 bp Feature: domain Description: HNHc Note: nucleases Location: 1691-1865 bp Feature: domain Description: HNHc Note: nucleases Location: 16 91-186 5 bp Feature: gene Location: 1869-2354 bp Feature: domain Description: PRK13660 Location: 2004-2343 bp Feature: domain Description: PRK136 6 0 Location: 2004-2343 bp Feature: gene Location: 2453-2788 bp Feature: domain Description: PRK14127 Location: 2465-2786 bp Feature: domain Description: PRK14127 Location: 246 5-2786 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13660 (hypothetical protein; Provisional), PRK14127 (cell division regulator GpsB), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEE01000040.1 Bacillus thuringiensis serovar wuhanensis strain BGSC 4T1 4T1_contig000040, whole genome shotgun sequence (66430 bp)
Overview 1 RT 1: 63834-65375 bp Neighborhood of RT #1 [63834, 66250] RVT-GII Feature: gene Location: 63834-64037 bp Feature: gene Location: 64119-64322 bp Feature: gene Location: 64319-66250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64640-65375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64640-6537 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NFEE01000102.1 Bacillus thuringiensis serovar wuhanensis strain BGSC 4T1 4T1_contig000102, whole genome shotgun sequence (12375 bp)
Overview 1 RT 1: 9779-11320 bp Neighborhood of RT #1 [9779, 12195] RVT-GII Feature: gene Location: 9779-9982 bp Feature: gene Location: 10064-10267 bp Feature: gene Location: 10264-12195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10585-11320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1058 5-11320 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NFEE01000045.1 Bacillus thuringiensis serovar wuhanensis strain BGSC 4T1 4T1_contig000045, whole genome shotgun sequence (6159 bp)
Overview 1 RT 1: 296-4670 bp Neighborhood of RT #1 [296, 4876] RVT-GII HEPN PRK06850 Feature: gene Location: 296-499 bp Feature: gene Location: 581-784 bp Feature: gene Location: 781-2712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1102-1837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1102-1837 bp Feature: gene Location: 2858-3301 bp Feature: domain Description: HEPN Location: 2912-3260 bp Feature: domain Description: HEPN Location: 29 12-3260 bp Feature: gene Location: 3428-4876 bp Feature: domain Description: PRK06850 Location: 3443-4670 bp Feature: domain Description: PRK06850 Location: 3443-4670 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEPN (smart00748), PRK06850 (hypothetical protein; Provisional), RVT-GII

Seq: NFEE01000027.1 Bacillus thuringiensis serovar wuhanensis strain BGSC 4T1 4T1_contig000027, whole genome shotgun sequence (15057 bp)
Overview 1 RT 1: 12721-14952 bp Neighborhood of RT #1 [12721, 14981] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 12721-12903 bp Feature: gene Location: 12893-13063 bp Feature: gene Location: 13164-14981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13434-14256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13434-14256 bp Feature: domain Description: Intron_maturas2 Location: 14337-14631 bp Feature: domain Description: Intron_maturas2 Location: 14337-14631 bp Feature: domain Description: HNHc Note: nucleases Location: 14778-14952 bp Feature: domain Description: HNHc Note: nucleases Location: 14778-14952 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEE01000129.1 Bacillus thuringiensis serovar wuhanensis strain BGSC 4T1 4T1_contig000129, whole genome shotgun sequence (17461 bp)
Overview 1 RT 1: 5365-8769 bp Neighborhood of RT #1 [5365, 8774] RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 5365-5751 bp Feature: gene Location: 6058-6447 bp Feature: gene Location: 6591-7898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6876-7515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6876-7515 bp Feature: domain Description: GIIM Note: maturase Location: 7590-7815 bp Feature: domain Description: GIIM Note: maturase Location: 7590-7815 bp Feature: gene Location: 8072-8251 bp Feature: gene Location: 8412-8774 bp Feature: domain Description: DDE_Tnp_1 Location: 8583-8769 bp Feature: domain Description: DDE_Tnp_1 Location: 8583-8769 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609)

Seq: NFEE01000065.1 Bacillus thuringiensis serovar wuhanensis strain BGSC 4T1 4T1_contig000065, whole genome shotgun sequence (44184 bp)
Overview 1 RT 1: 41028-44079 bp Neighborhood of RT #1 [41028, 44108] fliE fliF RVT-GII Intron_maturas2 HNHc Feature: gene Location: 41028-41327 bp Feature: domain Description: fliE Location: 41031-41325 bp Feature: domain Description: fliE Location: 41031-41325 bp Feature: gene Location: 41350-42207 bp Feature: domain Description: fliF Location: 41353-42193 bp Feature: domain Description: fliF Location: 41353-42193 bp Feature: gene Location: 42291-44108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42561-43383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42561-43383 bp Feature: domain Description: Intron_maturas2 Location: 43464-43758 bp Feature: domain Description: Intron_maturas2 Location: 43464-43758 bp Feature: domain Description: HNHc Note: nucleases Location: 43905-44079 bp Feature: domain Description: HNHc Note: nucleases Location: 43905-44079 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT fliE (TIGR00205), fliF (TIGR00206), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)