myRT

myRT report for GCA_002147425.1_ASM214742v1

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Seq: NFEG01000224.1 Bacillus thuringiensis serovar tohokuensis strain BGSC 4V1 4V1_contig000224, whole genome shotgun sequence (9426 bp)
Overview 1 RT 1: 506-2996 bp Neighborhood of RT #1 [506, 3007] RVT-GII GIIM COG4824 CwlA SH3b SH3b Feature: gene Location: 506-1780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 707-1322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 707-1 322 bp Feature: domain Description: GIIM Note: maturase Location: 1382-1589 bp Feature: domain Description: GIIM Note: maturase Location: 1 382-1 589 bp Feature: gene Location: 1863-2075 bp Feature: domain Description: COG4824 Location: 1869-2055 bp Feature: domain Description: COG4824 Location: 1 869-2055 bp Feature: gene Location: 2075-3007 bp Feature: domain Description: CwlA Location: 2084-2576 bp Feature: domain Description: CwlA Location: 2084-2576 bp Feature: domain Description: SH3b Location: 2612-2729 bp Feature: domain Description: SH3b Location: 261 2-2729 bp Feature: domain Description: SH3b Location: 2837-2996 bp Feature: domain Description: SH3b Location: 2837-2996 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4824 (Phage-related holin (Lysis protein) ), CwlA (COG5632), SH3b (smart00287), RVT-GII, GIIM (pfam08388)

Seq: NFEG01000007.1 Bacillus thuringiensis serovar tohokuensis strain BGSC 4V1 4V1_contig000007, whole genome shotgun sequence (2970 bp)
Overview 1 RT 1: 1-2696 bp Neighborhood of RT #1 [1, 2887] RVT-GII GIIM Feature: gene Location: 1-1096 bp Feature: gene Location: 1613-2887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1814-2429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1814-2 42 9 bp Feature: domain Description: GIIM Note: maturase Location: 2489-2696 bp Feature: domain Description: GIIM Note: maturase Location: 2 489-2 696 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NFEG01000148.1 Bacillus thuringiensis serovar tohokuensis strain BGSC 4V1 4V1_contig000148, whole genome shotgun sequence (30668 bp)
Overview 1 RT 1: 506-2949 bp Neighborhood of RT #1 [506, 2966] RVT-GII GIIM RnmV TRX_family Feature: gene Location: 506-1780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 707-1322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 707-13 22 bp Feature: domain Description: GIIM Note: maturase Location: 1382-1589 bp Feature: domain Description: GIIM Note: maturase Location: 13 82-1589 bp Feature: gene Location: 2310-2654 bp Feature: domain Description: RnmV Location: 2316-2592 bp Feature: domain Description: RnmV Location: 23 16-2592 bp Feature: gene Location: 2658-2966 bp Feature: domain Description: TRX_family Location: 2691-2949 bp Feature: domain Description: TRX_family Location: 2691-2949 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RnmV (COG1658), TRX_family (cd02947), RVT-GII, GIIM (pfam08388)

Seq: NFEG01000226.1 Bacillus thuringiensis serovar tohokuensis strain BGSC 4V1 4V1_contig000226, whole genome shotgun sequence (56341 bp)
Overview 1 RT 1: 506-2953 bp Neighborhood of RT #1 [506, 2955] RVT-GII GIIM DUF5065 Feature: gene Location: 506-1780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 707-1322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 707-1322 bp Feature: domain Description: GIIM Note: maturase Location: 1382-1589 bp Feature: domain Description: GIIM Note: maturase Location: 1382-1589 bp Feature: gene Location: 1854-2054 bp Feature: gene Location: 2497-2955 bp Feature: domain Description: DUF5065 Location: 2503-2953 bp Feature: domain Description: DUF5065 Location: 2503-2953 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5065 (pfam16723), RVT-GII, GIIM (pfam08388)

Seq: NFEG01000154.1 Bacillus thuringiensis serovar tohokuensis strain BGSC 4V1 4V1_contig000154, whole genome shotgun sequence (142298 bp)
Overview 1 RT 1: 84-4041 bp Neighborhood of RT #1 [84, 4052] RVT-GII GIIM BirA BirA2 PRK13299 Feature: gene Location: 84-1358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285-900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285 -900 bp Feature: domain Description: GIIM Note: maturase Location: 960-1167 bp Feature: domain Description: GIIM Note: maturase Location: 960-1167 bp Feature: gene Location: 1894-2874 bp Feature: domain Description: BirA Location: 1906-2131 bp Feature: domain Description: BirA Location: 1906-2131 bp Feature: domain Description: BirA2 Location: 2164-2869 bp Feature: domain Description: BirA2 Location: 2164-2869 bp Feature: gene Location: 2859-4052 bp Feature: domain Description: PRK13299 Location: 2865-4041 bp Feature: domain Description: PRK13299 Location: 2865 -4041 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BirA (COG1654), BirA2 (COG0340), PRK13299 (tRNA CCA-pyrophosphorylase; Provisional), RVT-GII, GIIM (pfam08388)

Seq: NFEG01000034.1 Bacillus thuringiensis serovar tohokuensis strain BGSC 4V1 4V1_contig000034, whole genome shotgun sequence (2714 bp)
Overview 1 RT 1: 21-2440 bp Neighborhood of RT #1 [21, 2631] IstB_IS21 RVT-GII GIIM Feature: gene Location: 21-503 bp Feature: domain Description: IstB_IS21 Location: 27-435 bp Feature: domain Description: IstB_IS21 Location: 27-435 bp Feature: gene Location: 580-813 bp Feature: gene Location: 1357-2631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1558-2173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1558-2173 bp Feature: domain Description: GIIM Note: maturase Location: 2233-2440 bp Feature: domain Description: GIIM Note: maturase Location: 2233-2440 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), IstB_IS21 (pfam01695)

Seq: NFEG01000149.1 Bacillus thuringiensis serovar tohokuensis strain BGSC 4V1 4V1_contig000149, whole genome shotgun sequence (6491 bp)
Overview 1 RT 1: 506-2677 bp Neighborhood of RT #1 [506, 2697] RVT-GII GIIM XhlA COG4824 Feature: gene Location: 506-1780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 707-1322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7 07 -1322 bp Feature: domain Description: GIIM Note: maturase Location: 1382-1589 bp Feature: domain Description: GIIM Note: maturase Location: 1382-1589 bp Feature: gene Location: 1973-2197 bp Feature: domain Description: XhlA Location: 1991-2180 bp Feature: domain Description: XhlA Location: 1991-2180 bp Feature: gene Location: 2272-2697 bp Feature: domain Description: COG4824 Location: 2287-2677 bp Feature: domain Description: COG4824 Location: 2287 -267 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XhlA (pfam10779), COG4824 (Phage-related holin (Lysis protein) ), RVT-GII, GIIM (pfam08388)

Seq: NFEG01000074.1 Bacillus thuringiensis serovar tohokuensis strain BGSC 4V1 4V1_contig000074, whole genome shotgun sequence (26175 bp)
Overview 1 RT 1: 9903-14398 bp Neighborhood of RT #1 [9903, 14398] DUF4870 PRK10420 RVT-GII DEDD_Tnp_IS110 COG3547 Feature: gene Location: 9903-10220 bp Feature: domain Description: DUF4870 Location: 9921-10197 bp Feature: domain Description: DUF48 70 Location: 9921-10197 bp Feature: gene Location: 10517-12178 bp Feature: domain Description: PRK10420 Location: 10520-12176 bp Feature: domain Description: PRK10420 Location: 10520-12176 bp Feature: gene Location: 12379-12609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12427-12547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12427-12547 bp Feature: gene Location: 12539-13684 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 12554-13028 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 12554-13028 bp Feature: domain Description: COG3547 Location: 13283-13643 bp Feature: domain Description: COG3547 Location: 1328 3-13643 bp Feature: gene Location: 14096-14398 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10420 (L-lactate permease; Provisional), RVT-GII, DEDD_Tnp_IS110 (pfam01548), COG3547 (Transposase ), DUF4870 (pfam09685)

Seq: NFEG01000152.1 Bacillus thuringiensis serovar tohokuensis strain BGSC 4V1 4V1_contig000152, whole genome shotgun sequence (20524 bp)
Overview 1 RT 1: 84-2670 bp Neighborhood of RT #1 [84, 2696] RVT-GII GIIM gcvH ArsC_like Feature: gene Location: 84-1358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285-900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285-9 00 bp Feature: domain Description: GIIM Note: maturase Location: 960-1167 bp Feature: domain Description: GIIM Note: maturase Location: 9 60-1167 bp Feature: gene Location: 1906-2289 bp Feature: domain Description: gcvH Location: 1915-2287 bp Feature: domain Description: gcvH Location: 19 15-2287 bp Feature: gene Location: 2331-2696 bp Feature: domain Description: ArsC_like Location: 2340-2670 bp Feature: domain Description: ArsC_like Location: 2340-2670 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT gcvH (TIGR00527), ArsC_like (cd03036), RVT-GII, GIIM (pfam08388)

Seq: NFEG01000147.1 Bacillus thuringiensis serovar tohokuensis strain BGSC 4V1 4V1_contig000147, whole genome shotgun sequence (4994 bp)
Overview 1 RT 1: 506-3736 bp Neighborhood of RT #1 [506, 3736] RVT-GII GIIM Rve Feature: gene Location: 506-1780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 707-1322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 707-1322 bp Feature: domain Description: GIIM Note: maturase Location: 1382-1589 bp Feature: domain Description: GIIM Note: maturase Location: 1382-1589 bp Feature: gene Location: 2885-3052 bp Feature: domain Description: Rve Location: 2918-3053 bp Feature: domain Description: Rve Location: 2918-3053 bp Feature: gene Location: 3227-3736 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), RVT-GII, GIIM (pfam08388)

Seq: NFEG01000141.1 Bacillus thuringiensis serovar tohokuensis strain BGSC 4V1 4V1_contig000141, whole genome shotgun sequence (73204 bp)
Overview 1 RT 1: 70848-72508 bp Neighborhood of RT #1 [70848, 72699] XhlA RVT-GII GIIM Feature: gene Location: 70848-71087 bp Feature: gene Location: 71087-71323 bp Feature: domain Description: XhlA Location: 71108-71300 bp Feature: domain Description: XhlA Location: 711 08-71300 bp Feature: gene Location: 71425-72699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71626-72241 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71626-72241 bp Feature: domain Description: GIIM Note: maturase Location: 72301-72508 bp Feature: domain Description: GIIM Note: maturase Location: 72301-72508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XhlA (pfam10779), RVT-GII, GIIM (pfam08388)

Seq: NFEG01000225.1 Bacillus thuringiensis serovar tohokuensis strain BGSC 4V1 4V1_contig000225, whole genome shotgun sequence (5464 bp)
Overview 1 RT 1: 506-2680 bp Neighborhood of RT #1 [506, 2700] RVT-GII GIIM XhlA COG4824 Feature: gene Location: 506-1780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 707-1322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 707-1322 bp Feature: domain Description: GIIM Note: maturase Location: 1382-1589 bp Feature: domain Description: GIIM Note: maturase Location: 1382-1589 bp Feature: gene Location: 1975-2199 bp Feature: domain Description: XhlA Location: 1993-2182 bp Feature: domain Description: XhlA Location: 1993-2182 bp Feature: gene Location: 2275-2700 bp Feature: domain Description: COG4824 Location: 2290-2680 bp Feature: domain Description: COG4824 Location: 2290-2680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XhlA (pfam10779), COG4824 (Phage-related holin (Lysis protein) ), RVT-GII, GIIM (pfam08388)

Seq: NFEG01000106.1 Bacillus thuringiensis serovar tohokuensis strain BGSC 4V1 4V1_contig000106, whole genome shotgun sequence (22528 bp)
Overview 1 RT 1: 19687-21832 bp Neighborhood of RT #1 [19687, 22023] Cupredoxin_like_3 RVT-GII GIIM Feature: gene Location: 19687-19860 bp Feature: gene Location: 20182-20571 bp Feature: domain Description: Cupredoxin_like_3 Location: 20314-20566 bp Feature: domain Description: Cupredoxin_like_3 Location: 20314-20566 bp Feature: gene Location: 20749-22023 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20950-21565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20950-21565 bp Feature: domain Description: GIIM Note: maturase Location: 21625-21832 bp Feature: domain Description: GIIM Note: maturase Location: 21625-21832 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cupredoxin_like_3 (cd04203), RVT-GII, GIIM (pfam08388)

Seq: NFEG01000153.1 Bacillus thuringiensis serovar tohokuensis strain BGSC 4V1 4V1_contig000153, whole genome shotgun sequence (2561 bp)
Overview 1 RT 1: 84-2561 bp Neighborhood of RT #1 [84, 2561] RVT-GII GIIM Feature: gene Location: 84-1358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285-900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285-900 bp Feature: domain Description: GIIM Note: maturase Location: 960-1167 bp Feature: domain Description: GIIM Note: maturase Location: 960-1167 bp Feature: gene Location: 1901-2561 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NFEG01000151.1 Bacillus thuringiensis serovar tohokuensis strain BGSC 4V1 4V1_contig000151, whole genome shotgun sequence (2934 bp)
Overview 1 RT 1: 84-2934 bp Neighborhood of RT #1 [84, 2934] RVT-GII GIIM Feature: gene Location: 84-1358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285-900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285-900 bp Feature: domain Description: GIIM Note: maturase Location: 960-1167 bp Feature: domain Description: GIIM Note: maturase Location: 960-1167 bp Feature: gene Location: 1875-2934 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NFEG01000058.1 Bacillus thuringiensis serovar tohokuensis strain BGSC 4V1 4V1_contig000058, whole genome shotgun sequence (3832 bp)
Overview 1 RT 1: 775-3558 bp Neighborhood of RT #1 [775, 3749] xerC COG4824 RVT-GII GIIM Feature: gene Location: 775-1743 bp Feature: domain Description: xerC Location: 838-1678 bp Feature: domain Description: xerC Location: 838-16 78 bp Feature: gene Location: 1759-1974 bp Feature: domain Description: COG4824 Location: 1774-1975 bp Feature: domain Description: COG4824 Location: 1774-1975 bp Feature: gene Location: 2475-3749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2676-3291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2676-3291 bp Feature: domain Description: GIIM Note: maturase Location: 3351-3558 bp Feature: domain Description: GIIM Note: maturase Location: 3351-3558 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4824 (Phage-related holin (Lysis protein) ), RVT-GII, GIIM (pfam08388), xerC (PRK01287)

Seq: NFEG01000222.1 Bacillus thuringiensis serovar tohokuensis strain BGSC 4V1 4V1_contig000222, whole genome shotgun sequence (7902 bp)
Overview 1 RT 1: 84-3903 bp Neighborhood of RT #1 [84, 3938] RVT-GII GIIM Rve HTH_XRE Feature: gene Location: 84-1358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285-900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285-900 bp Feature: domain Description: GIIM Note: maturase Location: 960-1167 bp Feature: domain Description: GIIM Note: maturase Location: 960-1167 bp Feature: gene Location: 1891-2136 bp Feature: domain Description: Rve Location: 1951-2074 bp Feature: domain Description: Rve Location: 1951-2074 bp Feature: gene Location: 2241-3938 bp Feature: domain Description: HTH_XRE Location: 3783-3903 bp Feature: domain Description: HTH_XRE Location: 3783-3903 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), HTH_XRE (smart00530), RVT-GII, GIIM (pfam08388)

Seq: NFEG01000150.1 Bacillus thuringiensis serovar tohokuensis strain BGSC 4V1 4V1_contig000150, whole genome shotgun sequence (7567 bp)
Overview 1 RT 1: 506-2827 bp Neighborhood of RT #1 [506, 2829] RVT-GII GIIM His_Phos_1 HAD_HPP Feature: gene Location: 506-1780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 707-1322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 707-1322 bp Feature: domain Description: GIIM Note: maturase Location: 1382-1589 bp Feature: domain Description: GIIM Note: maturase Location: 1382-1589 bp Feature: gene Location: 1927-2517 bp Feature: domain Description: His_Phos_1 Location: 1936-2497 bp Feature: domain Description: His_Phos_1 Location: 1936-2497 bp Feature: gene Location: 2524-2829 bp Feature: domain Description: HAD_HPP Location: 2533-2827 bp Feature: domain Description: HAD_HPP Location: 2533-2827 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT His_Phos_1 (pfam00300), HAD_HPP (cd07517), RVT-GII, GIIM (pfam08388)

Seq: NFEG01000047.1 Bacillus thuringiensis serovar tohokuensis strain BGSC 4V1 4V1_contig000047, whole genome shotgun sequence (7730 bp)
Overview 1 RT 1: 3649-7456 bp Neighborhood of RT #1 [3649, 7647] HflC SpoIIP RVT-GII GIIM Feature: gene Location: 3649-4617 bp Feature: domain Description: HflC Location: 3661-4519 bp Feature: domain Description: HflC Location: 3661-4519 bp Feature: gene Location: 4710-5902 bp Feature: domain Description: SpoIIP Location: 4992-5802 bp Feature: domain Description: SpoIIP Location: 4992-5802 bp Feature: gene Location: 6373-7647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6574-7189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6574-7189 bp Feature: domain Description: GIIM Note: maturase Location: 7249-7456 bp Feature: domain Description: GIIM Note: maturase Location: 7249-7456 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HflC (COG0330), SpoIIP (pfam07454), RVT-GII, GIIM (pfam08388)