myRT

myRT report for GCA_002147435.1_ASM214743v1

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Seq: NFEI01000080.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000080, whole genome shotgun sequence (5362 bp)
Overview 1 RT 1: 59-5223 bp Neighborhood of RT #1 [59, 5246] RVT-GII HNHc CwlT_like RVT-GII Intron_maturas2 HNHc Feature: gene Location: 59-247 bp Feature: gene Location: 398-628 bp Feature: gene Location: 791-2587 bp Ori: OTZ99734.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1049-1754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 049-1 754 bp Feature: domain Description: HNHc Note: nucleases Location: 2315-2450 bp Feature: domain Description: HNHc Note: nucleases Location: 231 5-2450 bp Feature: gene Location: 2656-2847 bp Ori: OTZ99735.1 Feature: domain Description: CwlT_like Location: 2683-2836 bp Feature: domain Description: CwlT_like Location: 2683-2836 bp Feature: gene Location: 3423-5246 bp Ori: OTZ99736.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3687-4521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3687-4521 bp Feature: domain Description: Intron_maturas2 Location: 4590-4929 bp Feature: domain Description: Intron_maturas2 Location: 4590-4929 bp Feature: domain Description: HNHc Note: nucleases Location: 5067-5223 bp Feature: domain Description: HNHc Note: nucleases Location: 5067-5223 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), CwlT_like, Intron_maturas2 (pfam01348)

Seq: NFEI01000197.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000197, whole genome shotgun sequence (4822 bp)
Overview 1 RT 1: 1-4607 bp Neighborhood of RT #1 [1, 4723] CwlT_like RVT-GII HNHc Feature: gene Location: 1-1249 bp Feature: gene Location: 1246-2244 bp Ori: OTZ87242.1 Feature: domain Description: CwlT_like Location: 2098-2218 bp Feature: domain Description: CwlT_like Location: 2 098-2 2 18 bp Feature: gene Location: 2918-4723 bp Ori: OTZ87243.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3212-3908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 12 -3908 bp Feature: domain Description: HNHc Note: nucleases Location: 4469-4607 bp Feature: domain Description: HNHc Note: nucleases Location: 4469-4607 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CwlT_like, RVT-GII, HNHc (smart00507)

Seq: NFEI01000083.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000083, whole genome shotgun sequence (13621 bp)
Overview 1 RT 1: 8979-12980 bp Neighborhood of RT #1 [8979, 13009] BclA_C EstA RVT-GII Intron_maturas2 HNHc Feature: gene Location: 8979-9587 bp Ori: OTZ99697.1 Feature: domain Description: BclA_C Location: 9177-9585 bp Feature: domain Description: BclA_C Location: 9177-9585 bp Feature: gene Location: 9740-11074 bp Feature: domain Description: EstA Location: 9785-10016 bp Feature: domain Description: EstA Location: 9785-10016 bp Feature: gene Location: 11186-13009 bp Ori: OTZ99698.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11456-12284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11456-12284 bp Feature: domain Description: Intron_maturas2 Location: 12356-12674 bp Feature: domain Description: Intron_maturas2 Location: 123 56-12674 bp Feature: domain Description: HNHc Note: nucleases Location: 12827-12980 bp Feature: domain Description: HNHc Note: nucleases Location: 12827-12980 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BclA_C (pfam18573), EstA (COG1075), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEI01000202.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000202, whole genome shotgun sequence (15686 bp)
Overview 1 RT 1: 5565-11316 bp Neighborhood of RT #1 [5565, 11345] RVT-GII HNHc LPD1 DUF3854 Feature: gene Location: 5565-6656 bp Feature: gene Location: 7091-7345 bp Feature: gene Location: 7377-9173 bp Ori: OTZ86982.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7671-8367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7671-8367 bp Feature: domain Description: HNHc Note: nucleases Location: 8967-9042 bp Feature: domain Description: HNHc Note: nucleases Location: 8967-904 2 bp Feature: gene Location: 9245-10042 bp Ori: OTZ86983.1 Feature: domain Description: LPD1 Location: 9791-9986 bp Feature: domain Description: LPD1 Location: 9791-9986 bp Feature: gene Location: 10032-11345 bp Ori: OTZ86984.1 Feature: domain Description: DUF3854 Location: 10977-11316 bp Feature: domain Description: DUF3854 Location: 10977-11316 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), LPD1 (pfam18796), DUF3854 (pfam12965)

Seq: NFEI01000180.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000180, whole genome shotgun sequence (3789 bp)
Overview 1 RT 1: 116-3455 bp Neighborhood of RT #1 [116, 3463] RVT-GII GIIM Rve Feature: gene Location: 116-295 bp Feature: gene Location: 469-1776 bp Ori: OTZ89692.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 754-1393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75 4-1393 bp Feature: domain Description: GIIM Note: maturase Location: 1468-1693 bp Feature: domain Description: GIIM Note: maturase Location: 1468-1693 bp Feature: gene Location: 2110-2556 bp Feature: gene Location: 2864-3463 bp Ori: OTZ89694.1 Feature: domain Description: Rve Location: 2867-3455 bp Feature: domain Description: Rve Location: 2867-345 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Rve (COG3316)

Seq: NFEI01000117.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000117, whole genome shotgun sequence (13544 bp)
Overview 1 RT 1: 10011-13329 bp Neighborhood of RT #1 [10011, 13445] OmpR RVT-GII HNHc Feature: gene Location: 10011-10718 bp Ori: OTZ95674.1 Feature: domain Description: OmpR Location: 10020-10689 bp Feature: domain Description: OmpR Location: 10020-106 89 bp Feature: gene Location: 10715-10966 bp Feature: gene Location: 11640-13445 bp Ori: OTZ95676.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11934-12630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11934-126 30 bp Feature: domain Description: HNHc Note: nucleases Location: 13191-13329 bp Feature: domain Description: HNHc Note: nucleases Location: 13191-13329 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OmpR (COG0745), RVT-GII, HNHc (smart00507)

Seq: NFEI01000128.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000128, whole genome shotgun sequence (19655 bp)
Overview 1 RT 1: 117-4090 bp Neighborhood of RT #1 [117, 4090] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 117-1940 bp Ori: OTZ94332.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 387-1215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 387 -1215 bp Feature: domain Description: Intron_maturas2 Location: 1287-1605 bp Feature: domain Description: Intron_maturas2 Location: 1287 -1605 bp Feature: domain Description: HNHc Note: nucleases Location: 1758-1911 bp Feature: domain Description: HNHc Note: nucleases Location: 17 58-1911 bp Feature: gene Location: 2541-3686 bp Feature: gene Location: 3704-4090 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEI01000107.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000107, whole genome shotgun sequence (145758 bp)
Overview 1 RT 1: 140597-144939 bp Neighborhood of RT #1 [140597, 145055] GltS_FMN OYE_like_FMN RVT-GII HNHc Feature: gene Location: 140597-142171 bp Ori: OTZ97521.1 Feature: domain Description: GltS_FMN Location: 140744-142106 bp Feature: domain Description: GltS_FMN Location: 140744-142106 bp Feature: gene Location: 142239-143180 bp Ori: OTZ97528.1 Feature: domain Description: OYE_like_FMN Location: 142272-143151 bp Feature: domain Description: OYE_like_FMN Location: 142272-143151 bp Feature: gene Location: 143250-145055 bp Ori: OTZ97522.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143544-144240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143544-144240 bp Feature: domain Description: HNHc Note: nucleases Location: 144801-144939 bp Feature: domain Description: HNHc Note: nucleases Location: 1448 01-144939 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GltS_FMN (cd02808), OYE_like_FMN (cd02933), RVT-GII, HNHc (smart00507)

Seq: NFEI01000167.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000167, whole genome shotgun sequence (21806 bp)
Overview 1 RT 1: 8346-12073 bp Neighborhood of RT #1 [8346, 12084] XhlA RVT-GII GIIM Holin_SPP1 CwlA SH3b SH3b Feature: gene Location: 8346-8723 bp Feature: gene Location: 8763-9005 bp Ori: OTZ90982.1 Feature: domain Description: XhlA Location: 8814-8982 bp Feature: domain Description: XhlA Location: 8814-89 82 bp Feature: gene Location: 9531-10805 bp Ori: OTZ90983.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9732-10347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9 732-10347 bp Feature: domain Description: GIIM Note: maturase Location: 10407-10614 bp Feature: domain Description: GIIM Note: maturase Location: 10407-10614 bp Feature: gene Location: 10904-11134 bp Ori: OTZ90984.1 Feature: domain Description: Holin_SPP1 Location: 10916-11120 bp Feature: domain Description: Holin_SPP1 Location: 109 16-11120 bp Feature: gene Location: 11152-12084 bp Ori: OTZ90985.1 Feature: domain Description: CwlA Location: 11161-11653 bp Feature: domain Description: CwlA Location: 11161-11653 bp Feature: domain Description: SH3b Location: 11689-11806 bp Feature: domain Description: SH3b Location: 11689 -11806 bp Feature: domain Description: SH3b Location: 11914-12073 bp Feature: domain Description: SH3b Location: 119 14-12073 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XhlA (pfam10779), RVT-GII, GIIM (pfam08388), Holin_SPP1 (pfam04688), CwlA (COG5632), SH3b (smart00287)

Seq: NFEI01000173.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000173, whole genome shotgun sequence (18988 bp)
Overview 1 RT 1: 100-3855 bp Neighborhood of RT #1 [100, 3860] RVT-GII HNHc FadH CdnL Feature: gene Location: 100-1905 bp Ori: OTZ90224.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 394-1090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 394-10 90 bp Feature: domain Description: HNHc Note: nucleases Location: 1651-1789 bp Feature: domain Description: HNHc Note: nucleases Location: 1651-1789 bp Feature: gene Location: 2568-2822 bp Ori: OTZ90225.1 Feature: domain Description: FadH Location: 2655-2787 bp Feature: domain Description: FadH Location: 2655-2787 bp Feature: gene Location: 3384-3860 bp Ori: OTZ90226.1 Feature: domain Description: CdnL Location: 3402-3855 bp Feature: domain Description: CdnL Location: 3402-3855 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), FadH (COG1902), CdnL (COG1329)

Seq: NFEI01000093.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000093, whole genome shotgun sequence (16434 bp)
Overview 1 RT 1: 14905-16435 bp Neighborhood of RT #1 [14905, 16434] DDE_Tnp_1 RVT-GII Feature: gene Location: 14905-15315 bp Feature: domain Description: DDE_Tnp_1 Location: 14914-15310 bp Feature: domain Description: DDE_Tnp_1 Location: 14914-15310 bp Feature: gene Location: 15476-15655 bp Feature: gene Location: 15829-16434 bp Ori: OTZ98563.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16114-16435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1611 4-16435 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII

Seq: NFEI01000210.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000210, whole genome shotgun sequence (15978 bp)
Overview 1 RT 1: 390-5171 bp Neighborhood of RT #1 [390, 5179] RVT-GII Intron_maturas2 HNHc RimL MgtE Feature: gene Location: 390-2213 bp Ori: OTZ86468.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 654-1488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 654-1488 bp Feature: domain Description: Intron_maturas2 Location: 1557-1896 bp Feature: domain Description: Intron_maturas2 Location: 1557-1896 bp Feature: domain Description: HNHc Note: nucleases Location: 2034-2190 bp Feature: domain Description: HNHc Note: nucleases Location: 2034-2190 bp Feature: gene Location: 2710-3216 bp Ori: OTZ86469.1 Feature: domain Description: RimL Location: 2719-3214 bp Feature: domain Description: RimL Location: 2719-3214 bp Feature: gene Location: 3851-5179 bp Ori: OTZ86470.1 Feature: domain Description: MgtE Location: 3866-5171 bp Feature: domain Description: MgtE Location: 3866-5171 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), RimL (COG1670), MgtE (pfam01769)

Seq: NFEI01000029.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000029, whole genome shotgun sequence (9210 bp)
Overview 1 RT 1: 5377-8798 bp Neighborhood of RT #1 [5377, 8821] NlpD Spr RVT-GII Intron_maturas2 HNHc Feature: gene Location: 5377-5952 bp Feature: gene Location: 5969-6865 bp Ori: OUA04787.1 Feature: domain Description: NlpD Location: 6011-6437 bp Feature: domain Description: NlpD Location: 6011-6437 bp Feature: domain Description: Spr Location: 6470-6806 bp Feature: domain Description: Spr Location: 6470-6806 bp Feature: gene Location: 6998-8821 bp Ori: OUA04788.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7262-8096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7262-8096 bp Feature: domain Description: Intron_maturas2 Location: 8165-8504 bp Feature: domain Description: Intron_maturas2 Location: 8165-8504 bp Feature: domain Description: HNHc Note: nucleases Location: 8642-8798 bp Feature: domain Description: HNHc Note: nucleases Location: 8642-8798 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NlpD (COG0739), Spr (COG0791), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEI01000079.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000079, whole genome shotgun sequence (5454 bp)
Overview 1 RT 1: 94-4635 bp Neighborhood of RT #1 [94, 4751] RVT-GII HNHc CwlT_like RVT-GII HNHc Feature: gene Location: 94-1890 bp Ori: OTZ99850.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 352-1057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 352-1057 bp Feature: domain Description: HNHc Note: nucleases Location: 1618-1753 bp Feature: domain Description: HNHc Note: nucleases Location: 1618-1753 bp Feature: gene Location: 2053-2283 bp Feature: gene Location: 2434-2622 bp Feature: gene Location: 2663-2791 bp Ori: OTZ99853.1 Feature: domain Description: CwlT_like Location: 2669-2774 bp Feature: domain Description: CwlT_like Location: 2669-2774 bp Feature: gene Location: 2946-4751 bp Ori: OTZ99852.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3240-3936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3240-3936 bp Feature: domain Description: HNHc Note: nucleases Location: 4497-4635 bp Feature: domain Description: HNHc Note: nucleases Location: 4497-4635 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), CwlT_like

Seq: NFEI01000182.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000182, whole genome shotgun sequence (17502 bp)
Overview 1 RT 1: 712-8548 bp Neighborhood of RT #1 [712, 8727] RVT-GII HNHc RVT-GII GIIM HNHc TraG-D_C Ftsk_gamma Ftsk_gamma rpsA Feature: gene Location: 712-2502 bp Ori: OTZ89654.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1009-1705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1009-1705 bp Feature: domain Description: HNHc Note: nucleases Location: 2245-2377 bp Feature: domain Description: HNHc Note: nucleases Location: 2245-2377 bp Feature: gene Location: 2604-3005 bp Feature: gene Location: 3678-5552 bp Ori: OTZ89655.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3978-4683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3978-4683 bp Feature: domain Description: GIIM Note: maturase Location: 4797-4965 bp Feature: domain Description: GIIM Note: maturase Location: 4797-4965 bp Feature: domain Description: HNHc Note: nucleases Location: 5313-5478 bp Feature: domain Description: HNHc Note: nucleases Location: 5313-5478 bp Feature: gene Location: 5785-7485 bp Ori: OTZ89656.1 Feature: domain Description: TraG-D_C Location: 5797-6115 bp Feature: domain Description: TraG-D_C Location: 5797-6115 bp Feature: domain Description: Ftsk_gamma Location: 6475-6655 bp Feature: domain Description: Ftsk_gamma Location: 6475-6655 bp Feature: domain Description: Ftsk_gamma Location: 6808-6982 bp Feature: domain Description: Ftsk_gamma Location: 6808-6982 bp Feature: gene Location: 7744-8727 bp Ori: OTZ89657.1 Feature: domain Description: rpsA Location: 8011-8548 bp Feature: domain Description: rpsA Location: 8011-8548 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), GIIM (pfam08388), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), rpsA (TIGR00717)

Seq: NFEI01000040.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000040, whole genome shotgun sequence (17191 bp)
Overview 1 RT 1: 8575-16355 bp Neighborhood of RT #1 [8575, 16480] TraG-D_C Ftsk_gamma RVT-GII GIIM HNHc RVT-GII HNHc Feature: gene Location: 8575-9345 bp Feature: gene Location: 9617-11488 bp Ori: OUA03789.1 Feature: domain Description: TraG-D_C Location: 9710-10025 bp Feature: domain Description: TraG-D_C Location: 9710-10025 bp Feature: domain Description: Ftsk_gamma Location: 10433-10613 bp Feature: domain Description: Ftsk_gamma Location: 10433-10613 bp Feature: gene Location: 11640-13514 bp Ori: OUA03790.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11940-12645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11940-12645 bp Feature: domain Description: GIIM Note: maturase Location: 12759-12927 bp Feature: domain Description: GIIM Note: maturase Location: 12759-12927 bp Feature: domain Description: HNHc Note: nucleases Location: 13275-13440 bp Feature: domain Description: HNHc Note: nucleases Location: 13275-13440 bp Feature: gene Location: 14187-14624 bp Feature: gene Location: 14690-16480 bp Ori: OUA03792.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14987-15683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14987-15683 bp Feature: domain Description: HNHc Note: nucleases Location: 16223-16355 bp Feature: domain Description: HNHc Note: nucleases Location: 16 223-16 355 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), Ftsk_gamma (smart00843), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NFEI01000140.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000140, whole genome shotgun sequence (15946 bp)
Overview 1 RT 1: 991-10137 bp Neighborhood of RT #1 [991, 10178] AE_Prim_S_like RVT-UG10 PRK13922 RapH_N TPR TPR Feature: gene Location: 991-1608 bp Feature: gene Location: 1618-2043 bp Feature: gene Location: 2482-8121 bp Ori: OTZ92895.1 Feature: domain Description: AE_Prim_S_like Location: 2692-2911 bp Feature: domain Description: AE_Prim_S_like Location: 2692-2911 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 3898-4552 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 3898-4552 bp Feature: gene Location: 8397-8609 bp Ori: OTZ92896.1 Feature: domain Description: PRK13922 Location: 8469-8589 bp Feature: domain Description: PRK13922 Location: 8469-8589 bp Feature: gene Location: 9087-10178 bp Ori: OTZ92897.1 Feature: domain Description: RapH_N Location: 9108-9279 bp Feature: domain Description: RapH_N Location: 9108-9279 bp Feature: domain Description: TPR Location: 9414-9681 bp Feature: domain Description: TPR Location: 9414-9681 bp Feature: domain Description: TPR Location: 9726-10137 bp Feature: domain Description: TPR Location: 9726-10137 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AE_Prim_S_like (cl01287), RVT-UG10, PRK13922 (rod shape-determining protein MreC; Provisional), RapH_N (pfam18801), TPR (smart00028)

Seq: NFEI01000179.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000179, whole genome shotgun sequence (10169 bp)
Overview 1 RT 1: 1-1477 bp Neighborhood of RT #1 [1, 1482] RVT-GII DDE_Tnp_1 Feature: gene Location: 1-606 bp Ori: OTZ89787.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 286-607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 286-607 bp Feature: gene Location: 780-959 bp Feature: gene Location: 1120-1482 bp Feature: domain Description: DDE_Tnp_1 Location: 1291-1477 bp Feature: domain Description: DDE_Tnp_1 Location: 1291-1477 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DDE_Tnp_1 (pfam01609)

Seq: NFEI01000127.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000127, whole genome shotgun sequence (8477 bp)
Overview 1 RT 1: 613-8169 bp Neighborhood of RT #1 [613, 8243] RVT-GII Intron_maturas2 HNHc RVT-GII HNHc RVT-GII GIIM HNHc Feature: gene Location: 613-2436 bp Ori: OTZ94348.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 883-1711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 883-1711 bp Feature: domain Description: Intron_maturas2 Location: 1783-2101 bp Feature: domain Description: Intron_maturas2 Location: 1783-2101 bp Feature: domain Description: HNHc Note: nucleases Location: 2254-2407 bp Feature: domain Description: HNHc Note: nucleases Location: 2254-2407 bp Feature: gene Location: 3403-5193 bp Ori: OTZ94349.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3700-4396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3700-4396 bp Feature: domain Description: HNHc Note: nucleases Location: 4936-5068 bp Feature: domain Description: HNHc Note: nucleases Location: 4936-5068 bp Feature: gene Location: 5259-5696 bp Feature: gene Location: 6369-8243 bp Ori: OTZ94351.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6669-7374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6669-7374 bp Feature: domain Description: GIIM Note: maturase Location: 7488-7656 bp Feature: domain Description: GIIM Note: maturase Location: 7488-7656 bp Feature: domain Description: HNHc Note: nucleases Location: 8004-8169 bp Feature: domain Description: HNHc Note: nucleases Location: 8004-8169 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), GIIM (pfam08388)

Seq: NFEI01000081.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000081, whole genome shotgun sequence (5362 bp)
Overview 1 RT 1: 59-5223 bp Neighborhood of RT #1 [59, 5246] RVT-GII HNHc CwlT_like RVT-GII Intron_maturas2 HNHc Feature: gene Location: 59-247 bp Feature: gene Location: 398-628 bp Feature: gene Location: 791-2587 bp Ori: OTZ99728.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1049-1754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1049-1754 bp Feature: domain Description: HNHc Note: nucleases Location: 2315-2450 bp Feature: domain Description: HNHc Note: nucleases Location: 2315-2450 bp Feature: gene Location: 2656-2847 bp Ori: OTZ99729.1 Feature: domain Description: CwlT_like Location: 2683-2839 bp Feature: domain Description: CwlT_like Location: 2683-2839 bp Feature: gene Location: 3423-5246 bp Ori: OTZ99730.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3687-4521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3687-4521 bp Feature: domain Description: Intron_maturas2 Location: 4590-4929 bp Feature: domain Description: Intron_maturas2 Location: 4590-4929 bp Feature: domain Description: HNHc Note: nucleases Location: 5067-5223 bp Feature: domain Description: HNHc Note: nucleases Location: 5067-5223 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), CwlT_like, Intron_maturas2 (pfam01348)

Seq: NFEI01000211.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000211, whole genome shotgun sequence (47298 bp)
Overview 1 RT 1: 117-3870 bp Neighborhood of RT #1 [117, 3881] RVT-GII Intron_maturas2 HNHc Lysozyme_like YxeA Feature: gene Location: 117-1940 bp Ori: OTZ86447.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 381-1215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 381-121 5 bp Feature: domain Description: Intron_maturas2 Location: 1284-1623 bp Feature: domain Description: Intron_maturas2 Location: 1284-1623 bp Feature: domain Description: HNHc Note: nucleases Location: 1761-1917 bp Feature: domain Description: HNHc Note: nucleases Location: 1761-1917 bp Feature: gene Location: 2516-3097 bp Ori: OTZ86448.1 Feature: domain Description: Lysozyme_like Location: 2651-3086 bp Feature: domain Description: Lysozyme_like Location: 2651-3086 bp Feature: gene Location: 3513-3881 bp Ori: OTZ86449.1 Feature: domain Description: YxeA Location: 3564-3870 bp Feature: domain Description: YxeA Location: 3564-3870 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Lysozyme_like (pfam13702), YxeA (COG5294)

Seq: NFEI01000170.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000170, whole genome shotgun sequence (5454 bp)
Overview 1 RT 1: 704-5224 bp Neighborhood of RT #1 [704, 5361] RVT-GII HNHc CwlT_like RVT-GII HNHc Feature: gene Location: 704-2509 bp Ori: OTZ90563.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 998-1694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 998-1694 bp Feature: domain Description: HNHc Note: nucleases Location: 2255-2393 bp Feature: domain Description: HNHc Note: nucleases Location: 22 55-2393 bp Feature: gene Location: 2625-2792 bp Ori: OTZ90564.1 Feature: domain Description: CwlT_like Location: 2667-2775 bp Feature: domain Description: CwlT_like Location: 2667-2775 bp Feature: gene Location: 2833-3021 bp Feature: gene Location: 3172-3402 bp Feature: gene Location: 3565-5361 bp Ori: OTZ90566.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3823-4528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3823-4528 bp Feature: domain Description: HNHc Note: nucleases Location: 5089-5224 bp Feature: domain Description: HNHc Note: nucleases Location: 5089-522 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), CwlT_like

Seq: NFEI01000096.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000096, whole genome shotgun sequence (27858 bp)
Overview 1 RT 1: 23666-27713 bp Neighborhood of RT #1 [23666, 27742] NhoA RVT-GII Intron_maturas2 HNHc Feature: gene Location: 23666-24505 bp Ori: OTZ98505.1 Feature: domain Description: NhoA Location: 23684-24476 bp Feature: domain Description: NhoA Location: 23 684-24476 bp Feature: gene Location: 25037-25306 bp Feature: gene Location: 25919-27742 bp Ori: OTZ98506.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26189-27017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26189-27017 bp Feature: domain Description: Intron_maturas2 Location: 27089-27407 bp Feature: domain Description: Intron_maturas2 Location: 27089-27407 bp Feature: domain Description: HNHc Note: nucleases Location: 27560-27713 bp Feature: domain Description: HNHc Note: nucleases Location: 27560-27713 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NhoA (COG2162), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEI01000204.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000204, whole genome shotgun sequence (56609 bp)
Overview 1 RT 1: 24988-32217 bp Neighborhood of RT #1 [24988, 32217] RVT-GII GIIM KOG1000 KOG1000 Feature: gene Location: 24988-25215 bp Feature: gene Location: 25287-26180 bp Feature: gene Location: 26942-28807 bp Ori: OTZ86880.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27242-27947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2724 2-27947 bp Feature: domain Description: GIIM Note: maturase Location: 28034-28217 bp Feature: domain Description: GIIM Note: maturase Location: 28034-28217 bp Feature: gene Location: 29082-31487 bp Ori: OTZ86881.1 Feature: domain Description: KOG1000 Location: 29793-30009 bp Feature: domain Description: KOG1000 Location: 29793-30009 bp Feature: domain Description: KOG1000 Location: 30612-30945 bp Feature: domain Description: KOG1000 Location: 30612-30945 bp Feature: gene Location: 31504-32217 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily )

Seq: NFEI01000026.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000026, whole genome shotgun sequence (148815 bp)
Overview 1 RT 1: 142097-147996 bp Neighborhood of RT #1 [142097, 148112] PRK10416 SMC_prok_B RVT-GII HNHc Feature: gene Location: 142097-143086 bp Ori: OUA05199.1 Feature: domain Description: PRK10416 Location: 142121-143063 bp Feature: domain Description: PRK10416 Location: 142121-143063 bp Feature: gene Location: 143102-146230 bp Feature: domain Description: SMC_prok_B Location: 143108-146198 bp Feature: domain Description: SMC_prok_B Location: 143108-146198 bp Feature: gene Location: 146307-148112 bp Ori: OUA05200.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 146601-147297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 146601-147297 bp Feature: domain Description: HNHc Note: nucleases Location: 147858-147996 bp Feature: domain Description: HNHc Note: nucleases Location: 147858-147996 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10416 (signal recognition particle-docking protein FtsY; Provisional), SMC_prok_B (TIGR02168), RVT-GII, HNHc (smart00507)

Seq: NFEI01000106.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000106, whole genome shotgun sequence (16750 bp)
Overview 1 RT 1: 12911-16338 bp Neighborhood of RT #1 [12911, 16361] NlpD Spr RVT-GII Intron_maturas2 HNHc Feature: gene Location: 12911-13486 bp Feature: gene Location: 13503-14378 bp Ori: OTZ97635.1 Feature: domain Description: NlpD Location: 13518-13947 bp Feature: domain Description: NlpD Location: 13518-13947 bp Feature: domain Description: Spr Location: 13983-14319 bp Feature: domain Description: Spr Location: 13983-14319 bp Feature: gene Location: 14538-16361 bp Ori: OTZ97636.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14802-15636 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14802-15636 bp Feature: domain Description: Intron_maturas2 Location: 15705-16044 bp Feature: domain Description: Intron_maturas2 Location: 15705-16044 bp Feature: domain Description: HNHc Note: nucleases Location: 16182-16338 bp Feature: domain Description: HNHc Note: nucleases Location: 16182-16338 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NlpD (COG0739), Spr (COG0791), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEI01000172.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000172, whole genome shotgun sequence (138816 bp)
Overview 1 RT 1: 100-3946 bp Neighborhood of RT #1 [100, 3954] RVT-GII HNHc SMC_prok_B rnc Feature: gene Location: 100-1905 bp Ori: OTZ90404.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 394-1090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 394-1090 bp Feature: domain Description: HNHc Note: nucleases Location: 1651-1789 bp Feature: domain Description: HNHc Note: nucleases Location: 1651-1789 bp Feature: gene Location: 2609-3070 bp Feature: domain Description: SMC_prok_B Location: 2615-3068 bp Feature: domain Description: SMC_prok_B Location: 2615-3068 bp Feature: gene Location: 3217-3954 bp Ori: OTZ90405.1 Feature: domain Description: rnc Location: 3268-3946 bp Feature: domain Description: rnc Location: 3268-3946 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), SMC_prok_B (TIGR02168), rnc (PRK00102)

Seq: NFEI01000183.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000183, whole genome shotgun sequence (8477 bp)
Overview 1 RT 1: 235-7836 bp Neighborhood of RT #1 [235, 7865] RVT-GII GIIM HNHc RVT-GII HNHc RVT-GII Intron_maturas2 HNHc Feature: gene Location: 235-2109 bp Ori: OTZ89628.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 535-1240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 535-1240 bp Feature: domain Description: GIIM Note: maturase Location: 1354-1522 bp Feature: domain Description: GIIM Note: maturase Location: 1354-1522 bp Feature: domain Description: HNHc Note: nucleases Location: 1870-2035 bp Feature: domain Description: HNHc Note: nucleases Location: 1870-2035 bp Feature: gene Location: 2782-3219 bp Feature: gene Location: 3285-5075 bp Ori: OTZ89630.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3582-4278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3582-4278 bp Feature: domain Description: HNHc Note: nucleases Location: 4818-4950 bp Feature: domain Description: HNHc Note: nucleases Location: 4818-4950 bp Feature: gene Location: 6042-7865 bp Ori: OTZ89631.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6312-7140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6312-7140 bp Feature: domain Description: Intron_maturas2 Location: 7212-7530 bp Feature: domain Description: Intron_maturas2 Location: 7212-7530 bp Feature: domain Description: HNHc Note: nucleases Location: 7683-7836 bp Feature: domain Description: HNHc Note: nucleases Location: 7683-7836 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), Intron_maturas2 (pfam01348)

Seq: NFEI01000012.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000012, whole genome shotgun sequence (4208 bp)
Overview 1 RT 1: 1-3389 bp Neighborhood of RT #1 [1, 3505] tape_meas_TP901 RVT-GII HNHc Feature: gene Location: 1-1602 bp Feature: domain Description: tape_meas_TP901 Location: 103-538 bp Feature: domain Description: tape_meas_TP901 Location: 103-538 bp Feature: gene Location: 1700-3505 bp Ori: OUA08008.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1994-2690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1994-2690 bp Feature: domain Description: HNHc Note: nucleases Location: 3251-3389 bp Feature: domain Description: HNHc Note: nucleases Location: 3251-3389 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT tape_meas_TP901 (TIGR01760), RVT-GII, HNHc (smart00507)

Seq: NFEI01000169.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000169, whole genome shotgun sequence (24662 bp)
Overview 1 RT 1: 704-5284 bp Neighborhood of RT #1 [704, 5448] RVT-GII HNHc BaeS Uup Uup Feature: gene Location: 704-2509 bp Ori: OTZ90575.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 998-1694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 998-1694 bp Feature: domain Description: HNHc Note: nucleases Location: 2255-2393 bp Feature: domain Description: HNHc Note: nucleases Location: 2255-2393 bp Feature: gene Location: 2610-3368 bp Feature: domain Description: BaeS Location: 2652-3351 bp Feature: domain Description: BaeS Location: 2652-3351 bp Feature: gene Location: 3820-5448 bp Ori: OTZ90591.1 Feature: domain Description: Uup Location: 3829-4060 bp Feature: domain Description: Uup Location: 3829-4060 bp Feature: domain Description: Uup Location: 4075-5284 bp Feature: domain Description: Uup Location: 4075-5284 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), BaeS (COG0642), Uup (COG0488)

Seq: NFEI01000171.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000171, whole genome shotgun sequence (4819 bp)
Overview 1 RT 1: 100-4819 bp Neighborhood of RT #1 [100, 4819] RVT-GII HNHc CwlT_like Feature: gene Location: 100-1905 bp Ori: OTZ90555.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 394-1090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 394-1090 bp Feature: domain Description: HNHc Note: nucleases Location: 1651-1789 bp Feature: domain Description: HNHc Note: nucleases Location: 1651-1789 bp Feature: gene Location: 2579-3574 bp Ori: OTZ90556.1 Feature: domain Description: CwlT_like Location: 3428-3551 bp Feature: domain Description: CwlT_like Location: 3428-3551 bp Feature: gene Location: 3571-4819 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), CwlT_like

Seq: NFEI01000014.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000014, whole genome shotgun sequence (3312 bp)
Overview 1 RT 1: 9-3097 bp Neighborhood of RT #1 [9, 3213] PhageMin_Tail RVT-GII HNHc Feature: gene Location: 9-704 bp Feature: domain Description: PhageMin_Tail Location: 135-636 bp Feature: domain Description: PhageMin_Tail Location: 135-636 bp Feature: gene Location: 1408-3213 bp Ori: OUA07732.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1702-2398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1702-2398 bp Feature: domain Description: HNHc Note: nucleases Location: 2959-3097 bp Feature: domain Description: HNHc Note: nucleases Location: 2959-3097 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PhageMin_Tail (pfam10145), RVT-GII, HNHc (smart00507)

Seq: NFEI01000155.1 Bacillus thuringiensis serovar colmeri strain BGSC 4X1 4X1_contig000155, whole genome shotgun sequence (870 bp)
Overview 1 RT 1: 30-639 bp Neighborhood of RT #1 [30, 722] RVT-GII GIIM Feature: gene Location: 30-722 bp Ori: OTZ91547.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36-339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36-33 9 bp Feature: domain Description: GIIM Note: maturase Location: 414-639 bp Feature: domain Description: GIIM Note: maturase Location: 414-639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)