myRT

myRT report for GCA_002147565.1_ASM214756v1

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Seq: NFEP01000130.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000130, whole genome shotgun sequence (71882 bp)
Overview 1 RT 1: 68136-71249 bp Neighborhood of RT #1 [68136, 71302] EFh_HEF_SCGN RVT-GII Intron_maturas2 HNHc Feature: gene Location: 68136-68252 bp Feature: gene Location: 68718-69200 bp Feature: domain Description: EFh_HEF_SCGN Location: 68796-69051 bp Feature: domain Description: EFh_HEF_SCGN Location: 68796-69051 bp Feature: gene Location: 69362-71302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69692-70529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69692-70529 bp Feature: domain Description: Intron_maturas2 Location: 70667-70958 bp Feature: domain Description: Intron_maturas2 Location: 70667-70958 bp Feature: domain Description: HNHc Note: nucleases Location: 71090-71249 bp Feature: domain Description: HNHc Note: nucleases Location: 71 090-71 249 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EFh_HEF_SCGN (cd16178), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEP01000038.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000038, whole genome shotgun sequence (38154 bp)
Overview 1 RT 1: 581-5875 bp Neighborhood of RT #1 [581, 5889] RVT-GII Intron_maturas2 HNHc pPIWI_RE_X MID_pPIWI_RE RNaseH_pPIWI_RE DUF3959 Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2 177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2 309-2 468 bp Feature: gene Location: 2632-4914 bp Feature: domain Description: pPIWI_RE_X Location: 2659-3583 bp Feature: domain Description: pPIWI_RE_X Location: 2 659-3583 bp Feature: domain Description: MID_pPIWI_RE Location: 3781-4093 bp Feature: domain Description: MID_pPIWI_RE Location: 3781-4093 bp Feature: domain Description: RNaseH_pPIWI_RE Location: 4159-4822 bp Feature: domain Description: RNaseH_pPIWI_RE Location: 4159-482 2 bp Feature: gene Location: 5122-5889 bp Feature: domain Description: DUF3959 Location: 5149-5875 bp Feature: domain Description: DUF3959 Location: 5149-5875 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pPIWI_RE_X, MID_pPIWI_RE (pfam18157), RNaseH_pPIWI_RE, DUF3959 (pfam13105), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEP01000055.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000055, whole genome shotgun sequence (9963 bp)
Overview 1 RT 1: 117-5232 bp Neighborhood of RT #1 [117, 5232] RVT-GII Intron_maturas2 HNHc HTH_XRE Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: gene Location: 3304-3648 bp Feature: domain Description: HTH_XRE Location: 3319-3490 bp Feature: domain Description: HTH_XRE Location: 3 3 19-3 490 bp Feature: gene Location: 4087-5232 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), HTH_XRE (smart00530)

Seq: NFEP01000146.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000146, whole genome shotgun sequence (94611 bp)
Overview 1 RT 1: 90834-93978 bp Neighborhood of RT #1 [90834, 94031] Response_reg YcbB HATPase_c RVT-GII Intron_maturas2 HNHc Feature: gene Location: 90834-91766 bp Feature: domain Description: Response_reg Location: 90849-91176 bp Feature: domain Description: Response_reg Location: 9084 9-91176 bp Feature: domain Description: YcbB Location: 91317-91731 bp Feature: domain Description: YcbB Location: 91317-91731 bp Feature: gene Location: 91769-91981 bp Feature: domain Description: HATPase_c Location: 91787-91955 bp Feature: domain Description: HATPase_c Location: 91787-91955 bp Feature: gene Location: 92091-94031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92421-93258 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 924 21-93258 bp Feature: domain Description: Intron_maturas2 Location: 93396-93687 bp Feature: domain Description: Intron_maturas2 Location: 93396-93687 bp Feature: domain Description: HNHc Note: nucleases Location: 93819-93978 bp Feature: domain Description: HNHc Note: nucleases Location: 93819-93978 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Response_reg (pfam00072), YcbB (pfam08664), HATPase_c (smart00387), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEP01000041.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000041, whole genome shotgun sequence (74499 bp)
Overview 1 RT 1: 581-4759 bp Neighborhood of RT #1 [581, 4848] RVT-GII Intron_maturas2 HNHc COG4362 BCCT Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2632-2919 bp Feature: domain Description: COG4362 Location: 2641-2917 bp Feature: domain Description: COG4362 Location: 2641-2917 bp Feature: gene Location: 3280-4848 bp Feature: domain Description: BCCT Location: 3316-4759 bp Feature: domain Description: BCCT Location: 3316-475 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4362 (Nitric oxide synthase, oxygenase domain ), BCCT (pfam02028), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEP01000215.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000215, whole genome shotgun sequence (5383 bp)
Overview 1 RT 1: 697-5152 bp Neighborhood of RT #1 [697, 5277] RVT-GII Intron_maturas2 HNHc RVT-GII HNHc Feature: gene Location: 697-2520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 967-1795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96 7-1795 bp Feature: domain Description: Intron_maturas2 Location: 1867-2185 bp Feature: domain Description: Intron_maturas2 Location: 186 7-2185 bp Feature: domain Description: HNHc Note: nucleases Location: 2338-2491 bp Feature: domain Description: HNHc Note: nucleases Location: 2338-2491 bp Feature: gene Location: 3487-5277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3784-4480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3784-4480 bp Feature: domain Description: HNHc Note: nucleases Location: 5020-5152 bp Feature: domain Description: HNHc Note: nucleases Location: 5020-5152 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Intron_maturas2 (pfam01348)

Seq: NFEP01000125.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000125, whole genome shotgun sequence (31675 bp)
Overview 1 RT 1: 29155-31042 bp Neighborhood of RT #1 [29155, 31095] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 29155-31095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29485-30322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29485-30322 bp Feature: domain Description: Intron_maturas2 Location: 30460-30751 bp Feature: domain Description: Intron_maturas2 Location: 30460-307 51 bp Feature: domain Description: HNHc Note: nucleases Location: 30883-31042 bp Feature: domain Description: HNHc Note: nucleases Location: 30883-31042 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEP01000050.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000050, whole genome shotgun sequence (39873 bp)
Overview 1 RT 1: 581-3663 bp Neighborhood of RT #1 [581, 3734] RVT-GII Intron_maturas2 HNHc DnaD_dom Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 18 8 6-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2736-2862 bp Feature: gene Location: 2952-3734 bp Feature: domain Description: DnaD_dom Location: 3480-3663 bp Feature: domain Description: DnaD_dom Location: 348 0-3663 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DnaD_dom (TIGR01446), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEP01000039.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000039, whole genome shotgun sequence (28210 bp)
Overview 1 RT 1: 581-3720 bp Neighborhood of RT #1 [581, 3720] RVT-GII Intron_maturas2 HNHc ThiF Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9 11-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309 -2468 bp Feature: gene Location: 2638-3258 bp Feature: domain Description: ThiF Location: 2641-3184 bp Feature: domain Description: ThiF Location: 2641-3184 bp Feature: gene Location: 3403-3720 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ThiF (pfam00899), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEP01000266.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000266, whole genome shotgun sequence (23954 bp)
Overview 1 RT 1: 20051-23785 bp Neighborhood of RT #1 [20051, 23838] InsQ ThiF RVT-GII Intron_maturas2 HNHc Feature: gene Location: 20051-20605 bp Feature: domain Description: InsQ Location: 20099-20579 bp Feature: domain Description: InsQ Location: 20099-20579 bp Feature: gene Location: 20835-21311 bp Feature: domain Description: ThiF Location: 21186-21312 bp Feature: domain Description: ThiF Location: 21186-21312 bp Feature: gene Location: 21898-23838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22228-23065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22228-23065 bp Feature: domain Description: Intron_maturas2 Location: 23203-23494 bp Feature: domain Description: Intron_maturas2 Location: 23203-23494 bp Feature: domain Description: HNHc Note: nucleases Location: 23626-23785 bp Feature: domain Description: HNHc Note: nucleases Location: 23626-23785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), ThiF (pfam00899), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEP01000233.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000233, whole genome shotgun sequence (7367 bp)
Overview 1 RT 1: 1-7367 bp Neighborhood of RT #1 [1, 7367] KOG4768 RVT-GII HNHc RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1-705 bp Feature: domain Description: KOG4768 Location: 61-700 bp Feature: domain Description: KOG4768 Location: 61-700 bp Feature: gene Location: 1672-3462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1969-2665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1969-2665 bp Feature: domain Description: HNHc Note: nucleases Location: 3205-3337 bp Feature: domain Description: HNHc Note: nucleases Location: 3205-3337 bp Feature: gene Location: 3528-3797 bp Feature: gene Location: 4389-6206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4659-5481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4659-5481 bp Feature: domain Description: Intron_maturas2 Location: 5562-5856 bp Feature: domain Description: Intron_maturas2 Location: 5562-5856 bp Feature: domain Description: HNHc Note: nucleases Location: 6003-6177 bp Feature: domain Description: HNHc Note: nucleases Location: 6003-6177 bp Feature: gene Location: 6307-6513 bp Feature: gene Location: 7186-7367 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), Intron_maturas2 (pfam01348)

Seq: NFEP01000230.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000230, whole genome shotgun sequence (41912 bp)
Overview 1 RT 1: 24770-29423 bp Neighborhood of RT #1 [24770, 29423] PRK03113 RVT-GII HNHc Feature: gene Location: 24770-25207 bp Feature: domain Description: PRK03113 Location: 24788-25160 bp Feature: domain Description: PRK03113 Location: 24788-25160 bp Feature: gene Location: 25241-25996 bp Feature: gene Location: 26218-28125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26518-27229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26518-27229 bp Feature: domain Description: HNHc Note: nucleases Location: 27820-27970 bp Feature: domain Description: HNHc Note: nucleases Location: 27820-27970 bp Feature: gene Location: 28911-29147 bp Feature: gene Location: 29223-29423 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK03113 (putative disulfide oxidoreductase; Provisional), RVT-GII, HNHc (smart00507)

Seq: NFEP01000045.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000045, whole genome shotgun sequence (18545 bp)
Overview 1 RT 1: 581-4186 bp Neighborhood of RT #1 [581, 4314] RVT-GII Intron_maturas2 HNHc DUF2512 SIR2-like Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2814-3251 bp Feature: domain Description: DUF2512 Location: 2823-3219 bp Feature: domain Description: DUF2512 Location: 2823-3219 bp Feature: gene Location: 3403-4314 bp Feature: domain Description: SIR2-like Location: 3493-4186 bp Feature: domain Description: SIR2-like Location: 3493-4186 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2512 (pfam10710), SIR2-like (cd01406), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEP01000208.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000208, whole genome shotgun sequence (2763 bp)
Overview 1 RT 1: 235-2035 bp Neighborhood of RT #1 [235, 2109] RVT-GII GIIM HNHc Feature: gene Location: 235-2109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 535-1240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 535-1240 bp Feature: domain Description: GIIM Note: maturase Location: 1354-1522 bp Feature: domain Description: GIIM Note: maturase Location: 1354-1522 bp Feature: domain Description: HNHc Note: nucleases Location: 1870-2035 bp Feature: domain Description: HNHc Note: nucleases Location: 1870-2035 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NFEP01000057.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000057, whole genome shotgun sequence (186250 bp)
Overview 1 RT 1: 117-5508 bp Neighborhood of RT #1 [117, 5528] RVT-GII Intron_maturas2 HNHc BaeS PRK13529 Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: gene Location: 2639-3730 bp Feature: domain Description: BaeS Location: 3353-3731 bp Feature: domain Description: BaeS Location: 3353-3731 bp Feature: gene Location: 3795-5528 bp Feature: domain Description: PRK13529 Location: 3834-5508 bp Feature: domain Description: PRK13529 Location: 3834-5508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), BaeS (COG0642), PRK13529 (oxaloacetate-decarboxylating malate dehydrogenase)

Seq: NFEP01000242.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000242, whole genome shotgun sequence (23488 bp)
Overview 1 RT 1: 6634-13425 bp Neighborhood of RT #1 [6634, 13487] T_den_put_tspse DUF3854 RVT-GII HNHc LPD1 Feature: gene Location: 6634-7557 bp Feature: domain Description: T_den_put_tspse Location: 6676-7540 bp Feature: domain Description: T_den_put_tspse Location: 6676-7540 bp Feature: gene Location: 7669-8163 bp Feature: domain Description: DUF3854 Location: 7780-8134 bp Feature: domain Description: DUF3854 Location: 7780-8134 bp Feature: gene Location: 8287-10119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8599-9298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8599-9298 bp Feature: domain Description: HNHc Note: nucleases Location: 9838-10003 bp Feature: domain Description: HNHc Note: nucleases Location: 9838-10003 bp Feature: gene Location: 10892-11722 bp Feature: gene Location: 11712-13487 bp Feature: domain Description: LPD1 Location: 13236-13425 bp Feature: domain Description: LPD1 Location: 13236-13425 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LPD1 (pfam18796), T_den_put_tspse (TIGR01784), DUF3854 (pfam12965), RVT-GII, HNHc (smart00507)

Seq: NFEP01000250.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000250, whole genome shotgun sequence (24565 bp)
Overview 1 RT 1: 20546-23741 bp Neighborhood of RT #1 [20546, 23857] Lysozyme_like Spr RVT-GII HNHc Feature: gene Location: 20546-21154 bp Feature: gene Location: 21178-21936 bp Feature: domain Description: Lysozyme_like Location: 21181-21517 bp Feature: domain Description: Lysozyme_like Location: 21181-21517 bp Feature: domain Description: Spr Location: 21532-21919 bp Feature: domain Description: Spr Location: 21532-21919 bp Feature: gene Location: 22052-23857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22346-23042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22346-23042 bp Feature: domain Description: HNHc Note: nucleases Location: 23603-23741 bp Feature: domain Description: HNHc Note: nucleases Location: 23603-23741 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lysozyme_like (pfam13702), Spr (COG0791), RVT-GII, HNHc (smart00507)

Seq: NFEP01000190.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000190, whole genome shotgun sequence (19255 bp)
Overview 1 RT 1: 15027-19086 bp Neighborhood of RT #1 [15027, 19139] MarR glpT RVT-GII Intron_maturas2 HNHc Feature: gene Location: 15027-15485 bp Feature: domain Description: MarR Location: 15087-15441 bp Feature: domain Description: MarR Location: 15087-15441 bp Feature: gene Location: 15755-16618 bp Feature: domain Description: glpT Location: 15773-16619 bp Feature: domain Description: glpT Location: 15773-16619 bp Feature: gene Location: 17199-19139 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17529-18366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17529-18 366 bp Feature: domain Description: Intron_maturas2 Location: 18504-18795 bp Feature: domain Description: Intron_maturas2 Location: 18 504-18 795 bp Feature: domain Description: HNHc Note: nucleases Location: 18927-19086 bp Feature: domain Description: HNHc Note: nucleases Location: 18 927-19086 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MarR (pfam01047), glpT (TIGR00712), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEP01000186.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000186, whole genome shotgun sequence (29791 bp)
Overview 1 RT 1: 25237-29622 bp Neighborhood of RT #1 [25237, 29675] AcrR MFS_MefA_like RVT-GII Intron_maturas2 HNHc Feature: gene Location: 25237-25872 bp Feature: domain Description: AcrR Location: 25261-25711 bp Feature: domain Description: AcrR Location: 25261-25711 bp Feature: gene Location: 25919-27166 bp Feature: domain Description: MFS_MefA_like Location: 25973-27146 bp Feature: domain Description: MFS_MefA_like Location: 25973-27146 bp Feature: gene Location: 27735-29675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28065-28902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28065-28902 bp Feature: domain Description: Intron_maturas2 Location: 29040-29331 bp Feature: domain Description: Intron_maturas2 Location: 29040-29331 bp Feature: domain Description: HNHc Note: nucleases Location: 29463-29622 bp Feature: domain Description: HNHc Note: nucleases Location: 29463-29622 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), MFS_MefA_like (cd06173), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEP01000147.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000147, whole genome shotgun sequence (8184 bp)
Overview 1 RT 1: 4506-7551 bp Neighborhood of RT #1 [4506, 7604] SASP Tar RVT-GII Intron_maturas2 HNHc Feature: gene Location: 4506-4721 bp Feature: domain Description: SASP Location: 4536-4698 bp Feature: domain Description: SASP Location: 4536-4698 bp Feature: gene Location: 4888-5547 bp Feature: domain Description: Tar Location: 4894-5539 bp Feature: domain Description: Tar Location: 4894-5539 bp Feature: gene Location: 5664-7604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5994-6831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5994-6831 bp Feature: domain Description: Intron_maturas2 Location: 6969-7260 bp Feature: domain Description: Intron_maturas2 Location: 6969-7260 bp Feature: domain Description: HNHc Note: nucleases Location: 7392-7551 bp Feature: domain Description: HNHc Note: nucleases Location: 7392-7551 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SASP (pfam00269), Tar (COG0840), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEP01000244.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000244, whole genome shotgun sequence (4370 bp)
Overview 1 RT 1: 1-3737 bp Neighborhood of RT #1 [1, 3790] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1-1733 bp Feature: gene Location: 1850-3790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2180-3017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 80-3017 bp Feature: domain Description: Intron_maturas2 Location: 3155-3446 bp Feature: domain Description: Intron_maturas2 Location: 3155-3446 bp Feature: domain Description: HNHc Note: nucleases Location: 3578-3737 bp Feature: domain Description: HNHc Note: nucleases Location: 3578-3737 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEP01000206.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000206, whole genome shotgun sequence (8283 bp)
Overview 1 RT 1: 1-4117 bp Neighborhood of RT #1 [1, 4296] RVT-GII GIIM HNHc TraG-D_C Ftsk_gamma rpsA Feature: gene Location: 1-1380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10-511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10-511 bp Feature: domain Description: GIIM Note: maturase Location: 625-793 bp Feature: domain Description: GIIM Note: maturase Location: 625-793 bp Feature: domain Description: HNHc Note: nucleases Location: 1141-1306 bp Feature: domain Description: HNHc Note: nucleases Location: 1141-1306 bp Feature: gene Location: 1613-3055 bp Feature: domain Description: TraG-D_C Location: 1625-1943 bp Feature: domain Description: TraG-D_C Location: 1625-1943 bp Feature: domain Description: Ftsk_gamma Location: 2378-2537 bp Feature: domain Description: Ftsk_gamma Location: 2378-2537 bp Feature: gene Location: 3313-4296 bp Feature: domain Description: rpsA Location: 3580-4117 bp Feature: domain Description: rpsA Location: 3580-4117 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), rpsA (TIGR00717)

Seq: NFEP01000043.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000043, whole genome shotgun sequence (4654 bp)
Overview 1 RT 1: 581-3593 bp Neighborhood of RT #1 [581, 4599] RVT-GII Intron_maturas2 HNHc HTH_28 HTH_28 Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 23 09-2468 bp Feature: gene Location: 2654-3211 bp Feature: gene Location: 3245-4599 bp Feature: domain Description: HTH_28 Location: 3269-3407 bp Feature: domain Description: HTH_28 Location: 3269-3407 bp Feature: domain Description: HTH_28 Location: 3434-3593 bp Feature: domain Description: HTH_28 Location: 3434-3593 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_28 (pfam13518), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEP01000253.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000253, whole genome shotgun sequence (12105 bp)
Overview 1 RT 1: 8451-11936 bp Neighborhood of RT #1 [8451, 11989] FtsK_SpoIIIE RVT-GII Intron_maturas2 HNHc Feature: gene Location: 8451-8633 bp Feature: gene Location: 8749-9480 bp Feature: domain Description: FtsK_SpoIIIE Location: 9127-9457 bp Feature: domain Description: FtsK_SpoIIIE Location: 9127-9457 bp Feature: gene Location: 10049-11989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10379-11216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10379-11216 bp Feature: domain Description: Intron_maturas2 Location: 11354-11645 bp Feature: domain Description: Intron_maturas2 Location: 11354-11645 bp Feature: domain Description: HNHc Note: nucleases Location: 11777-11936 bp Feature: domain Description: HNHc Note: nucleases Location: 11777-11936 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), FtsK_SpoIIIE (pfam01580)

Seq: NFEP01000047.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000047, whole genome shotgun sequence (100711 bp)
Overview 1 RT 1: 581-4344 bp 2 RT 2: 95881-100078 bp Neighborhood of RT #1 [581, 4637] RVT-GII Intron_maturas2 HNHc DUF4879 HTH_MerR-like_sg1 UbiE Neighborhood of RT #2 [95881, 100131] AcoR RVT-GII Intron_maturas2 HNHc Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2638-2907 bp Feature: domain Description: DUF4879 Location: 2653-2902 bp Feature: domain Description: DUF4879 Location: 2653-2902 bp Feature: gene Location: 3414-4637 bp Feature: domain Description: HTH_MerR-like_sg1 Location: 3417-3729 bp Feature: domain Description: HTH_MerR-like_sg1 Location: 3417-3729 bp Feature: domain Description: UbiE Location: 4074-4344 bp Feature: domain Description: UbiE Location: 4074-4344 bp Feature: gene Location: 95881-97731 bp Feature: domain Description: AcoR Location: 95905-97729 bp Feature: domain Description: AcoR Location: 95905-97729 bp Feature: gene Location: 97854-97967 bp Feature: gene Location: 98191-100131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98521-99358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98521-99358 bp Feature: domain Description: Intron_maturas2 Location: 99496-99787 bp Feature: domain Description: Intron_maturas2 Location: 99496-99787 bp Feature: domain Description: HNHc Note: nucleases Location: 99919-100078 bp Feature: domain Description: HNHc Note: nucleases Location: 99919-100078 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4879 (pfam16219), HTH_MerR-like_sg1 (cd04777), UbiE (COG2226), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), AcoR (COG3284)

Seq: NFEP01000258.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000258, whole genome shotgun sequence (16707 bp)
Overview 1 RT 1: 11532-16538 bp Neighborhood of RT #1 [11532, 16591] CPBP Tar RVT-GII Intron_maturas2 HNHc Feature: gene Location: 11532-12017 bp Feature: domain Description: CPBP Location: 11679-11985 bp Feature: domain Description: CPBP Location: 11679-11985 bp Feature: gene Location: 12988-14070 bp Feature: domain Description: Tar Location: 13360-14071 bp Feature: domain Description: Tar Location: 13360-14071 bp Feature: gene Location: 14651-16591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14981-15818 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14981-15818 bp Feature: domain Description: Intron_maturas2 Location: 15956-16247 bp Feature: domain Description: Intron_maturas2 Location: 15956-16247 bp Feature: domain Description: HNHc Note: nucleases Location: 16379-16538 bp Feature: domain Description: HNHc Note: nucleases Location: 16379-16538 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CPBP, Tar (COG0840), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEP01000225.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000225, whole genome shotgun sequence (13294 bp)
Overview 1 RT 1: 7602-13125 bp Neighborhood of RT #1 [7602, 13178] CetZ_tubulin-like CetZ_tubulin-like RVT-GII Intron_maturas2 HNHc Feature: gene Location: 7602-9056 bp Feature: domain Description: CetZ_tubulin-like Location: 7641-8019 bp Feature: domain Description: CetZ_tubulin-like Location: 7641-8019 bp Feature: domain Description: CetZ_tubulin-like Location: 8151-8505 bp Feature: domain Description: CetZ_tubulin-like Location: 8151-8505 bp Feature: gene Location: 9061-9483 bp Feature: gene Location: 11238-13178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11568-12405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11568-12405 bp Feature: domain Description: Intron_maturas2 Location: 12543-12834 bp Feature: domain Description: Intron_maturas2 Location: 12543-12834 bp Feature: domain Description: HNHc Note: nucleases Location: 12966-13125 bp Feature: domain Description: HNHc Note: nucleases Location: 12966-13125 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), CetZ_tubulin-like (cd02202)

Seq: NFEP01000137.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000137, whole genome shotgun sequence (7786 bp)
Overview 1 RT 1: 4240-7365 bp Neighborhood of RT #1 [4240, 7646] DDE_Tnp_1 RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 4240-5289 bp Feature: domain Description: DDE_Tnp_1 Location: 4597-5284 bp Feature: domain Description: DDE_Tnp_1 Location: 4597-528 4 bp Feature: gene Location: 5450-5629 bp Feature: gene Location: 5803-7110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6088-6727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6088-6727 bp Feature: domain Description: GIIM Note: maturase Location: 6802-7027 bp Feature: domain Description: GIIM Note: maturase Location: 6802-7027 bp Feature: gene Location: 7254-7646 bp Feature: domain Description: DDE_Tnp_1 Location: 7263-7365 bp Feature: domain Description: DDE_Tnp_1 Location: 7263-7365 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388)

Seq: NFEP01000066.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000066, whole genome shotgun sequence (55330 bp)
Overview 1 RT 1: 49932-55161 bp Neighborhood of RT #1 [49932, 55214] CcmA PRK12896 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 49932-50834 bp Feature: domain Description: CcmA Location: 49935-50805 bp Feature: domain Description: CcmA Location: 49935-50805 bp Feature: gene Location: 51040-51786 bp Feature: domain Description: PRK12896 Location: 51043-51781 bp Feature: domain Description: PRK12896 Location: 51043-51781 bp Feature: gene Location: 53274-55214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53604-54441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53604-54441 bp Feature: domain Description: Intron_maturas2 Location: 54579-54870 bp Feature: domain Description: Intron_maturas2 Location: 54579-54870 bp Feature: domain Description: HNHc Note: nucleases Location: 55002-55161 bp Feature: domain Description: HNHc Note: nucleases Location: 55002-55161 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CcmA (COG4133), PRK12896 (methionine aminopeptidase; Reviewed), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEP01000044.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000044, whole genome shotgun sequence (18926 bp)
Overview 1 RT 1: 581-3435 bp Neighborhood of RT #1 [581, 3440] RVT-GII Intron_maturas2 HNHc DUF4865 Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 230 9-2468 bp Feature: gene Location: 2637-2849 bp Feature: gene Location: 2892-3440 bp Feature: domain Description: DUF4865 Location: 2895-3435 bp Feature: domain Description: DUF4865 Location: 2895-3435 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4865 (pfam16157), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEP01000247.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000247, whole genome shotgun sequence (48599 bp)
Overview 1 RT 1: 45085-48430 bp Neighborhood of RT #1 [45085, 48483] RimL NIPSNAP RVT-GII Intron_maturas2 HNHc Feature: gene Location: 45085-45681 bp Feature: domain Description: RimL Location: 45340-45637 bp Feature: domain Description: RimL Location: 45340-45637 bp Feature: gene Location: 45654-45974 bp Feature: domain Description: NIPSNAP Location: 45678-45882 bp Feature: domain Description: NIPSNAP Location: 45678-45882 bp Feature: gene Location: 46543-48483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46873-47710 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46873-47710 bp Feature: domain Description: Intron_maturas2 Location: 47848-48139 bp Feature: domain Description: Intron_maturas2 Location: 47848-48139 bp Feature: domain Description: HNHc Note: nucleases Location: 48271-48430 bp Feature: domain Description: HNHc Note: nucleases Location: 48271-48430 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RimL (COG1670), NIPSNAP (pfam07978), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEP01000040.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000040, whole genome shotgun sequence (5386 bp)
Overview 1 RT 1: 581-4169 bp Neighborhood of RT #1 [581, 4711] RVT-GII Intron_maturas2 HNHc Bacillus_HBL Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2641-3420 bp Feature: gene Location: 3482-4711 bp Feature: domain Description: Bacillus_HBL Location: 3617-4169 bp Feature: domain Description: Bacillus_HBL Location: 3617-4169 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bacillus_HBL (pfam05791), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEP01000223.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000223, whole genome shotgun sequence (4835 bp)
Overview 1 RT 1: 1-4758 bp Neighborhood of RT #1 [1, 4835] TraC-F-type RVT-GII HNHc TraC-F-type Feature: gene Location: 1-354 bp Feature: gene Location: 385-1353 bp Feature: domain Description: TraC-F-type Location: 412-1192 bp Feature: domain Description: TraC-F-type Location: 412-1192 bp Feature: gene Location: 1645-3477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1945-2650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1945-2650 bp Feature: domain Description: HNHc Note: nucleases Location: 3229-3361 bp Feature: domain Description: HNHc Note: nucleases Location: 3229-33 61 bp Feature: gene Location: 4206-4835 bp Feature: domain Description: TraC-F-type Location: 4296-4758 bp Feature: domain Description: TraC-F-type Location: 4296-4758 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), TraC-F-type (TIGR02746)

Seq: NFEP01000048.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000048, whole genome shotgun sequence (70941 bp)
Overview 1 RT 1: 581-4212 bp Neighborhood of RT #1 [581, 4586] RVT-GII Intron_maturas2 HNHc DUF2812 zf-HC2 DUF4179 Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2681-3232 bp Feature: domain Description: DUF2812 Location: 2684-2978 bp Feature: domain Description: DUF2812 Location: 2684-2978 bp Feature: gene Location: 3609-4586 bp Feature: domain Description: zf-HC2 Location: 3642-3717 bp Feature: domain Description: zf-HC2 Location: 3642-3717 bp Feature: domain Description: DUF4179 Location: 3921-4212 bp Feature: domain Description: DUF4179 Location: 3921-4212 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2812 (pfam11193), zf-HC2 (pfam13490), DUF4179 (pfam13786), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEP01000051.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000051, whole genome shotgun sequence (8827 bp)
Overview 1 RT 1: 117-3647 bp Neighborhood of RT #1 [117, 3712] RVT-GII Intron_maturas2 HNHc nicotinamidase_related Acetyltransf_8 Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: gene Location: 2626-3141 bp Feature: domain Description: nicotinamidase_related Location: 2638-3088 bp Feature: domain Description: nicotinamidase_related Location: 2638-3088 bp Feature: gene Location: 3176-3712 bp Feature: domain Description: Acetyltransf_8 Location: 3218-3647 bp Feature: domain Description: Acetyltransf_8 Location: 3218-3647 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), nicotinamidase_related (cd01014), Acetyltransf_8 (pfam13523)

Seq: NFEP01000199.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000199, whole genome shotgun sequence (4746 bp)
Overview 1 RT 1: 299-3922 bp Neighborhood of RT #1 [299, 4038] RVT-GII HNHc Feature: gene Location: 299-874 bp Feature: gene Location: 891-2182 bp Feature: gene Location: 2233-4038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2527-3223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2527-3223 bp Feature: domain Description: HNHc Note: nucleases Location: 3784-3922 bp Feature: domain Description: HNHc Note: nucleases Location: 3784-3922 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NFEP01000226.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000226, whole genome shotgun sequence (43978 bp)
Overview 1 RT 1: 25347-32576 bp 2 RT 2: 39485-43809 bp Neighborhood of RT #1 [25347, 32576] RVT-GII GIIM KOG1000 KOG1000 Neighborhood of RT #2 [39485, 43862] LolD LolE RVT-GII Intron_maturas2 HNHc Feature: gene Location: 25347-25574 bp Feature: gene Location: 25646-26539 bp Feature: gene Location: 27301-29166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27601-28306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27601-28306 bp Feature: domain Description: GIIM Note: maturase Location: 28393-28576 bp Feature: domain Description: GIIM Note: maturase Location: 28393-28576 bp Feature: gene Location: 29441-31846 bp Feature: domain Description: KOG1000 Location: 30152-30368 bp Feature: domain Description: KOG1000 Location: 30152-30368 bp Feature: domain Description: KOG1000 Location: 30971-31304 bp Feature: domain Description: KOG1000 Location: 30971-31304 bp Feature: gene Location: 31863-32576 bp Feature: gene Location: 39485-40237 bp Feature: domain Description: LolD Location: 39500-40166 bp Feature: domain Description: LolD Location: 39500-40166 bp Feature: gene Location: 40245-41396 bp Feature: domain Description: LolE Location: 40257-41343 bp Feature: domain Description: LolE Location: 40257-41343 bp Feature: gene Location: 41922-43862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42252-43089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42252-43089 bp Feature: domain Description: Intron_maturas2 Location: 43227-43518 bp Feature: domain Description: Intron_maturas2 Location: 43227-43518 bp Feature: domain Description: HNHc Note: nucleases Location: 43650-43809 bp Feature: domain Description: HNHc Note: nucleases Location: 43650-43809 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), LolD (COG1136), LolE (COG4591), Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEP01000173.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000173, whole genome shotgun sequence (80573 bp)
Overview 1 RT 1: 76215-80404 bp Neighborhood of RT #1 [76215, 80457] B_an_ocin RVT-GII Intron_maturas2 HNHc Feature: gene Location: 76215-76541 bp Feature: domain Description: B_an_ocin Location: 76224-76497 bp Feature: domain Description: B_an_ocin Location: 76224-76497 bp Feature: gene Location: 77031-77516 bp Feature: gene Location: 78517-80457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78847-79684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78847-79684 bp Feature: domain Description: Intron_maturas2 Location: 79822-80113 bp Feature: domain Description: Intron_maturas2 Location: 79822-80113 bp Feature: domain Description: HNHc Note: nucleases Location: 80245-80404 bp Feature: domain Description: HNHc Note: nucleases Location: 80245-80404 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT B_an_ocin (TIGR03601), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEP01000180.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000180, whole genome shotgun sequence (44173 bp)
Overview 1 RT 1: 40792-44004 bp Neighborhood of RT #1 [40792, 44057] PadR RVT-GII Intron_maturas2 HNHc Feature: gene Location: 40792-41037 bp Feature: gene Location: 41192-41506 bp Feature: domain Description: PadR Location: 41240-41450 bp Feature: domain Description: PadR Location: 41240-41450 bp Feature: gene Location: 42117-44057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42447-43284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42447-43284 bp Feature: domain Description: Intron_maturas2 Location: 43422-43713 bp Feature: domain Description: Intron_maturas2 Location: 43422-43713 bp Feature: domain Description: HNHc Note: nucleases Location: 43845-44004 bp Feature: domain Description: HNHc Note: nucleases Location: 43845-44004 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PadR (pfam03551), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEP01000058.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000058, whole genome shotgun sequence (163415 bp)
Overview 1 RT 1: 117-3730 bp 2 RT 2: 158268-162782 bp Neighborhood of RT #1 [117, 3738] RVT-GII Intron_maturas2 HNHc MPP_YhcR_N DUF3886 Neighborhood of RT #2 [158268, 162835] PRK13670 Arm-DNA-bind_4 Phage_int_SAM_3 INT_ICEBs1_C_like RVT-GII Intron_maturas2 HNHc Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: gene Location: 2638-3273 bp Feature: domain Description: MPP_YhcR_N Location: 2752-3274 bp Feature: domain Description: MPP_YhcR_N Location: 2752-3274 bp Feature: gene Location: 3475-3738 bp Feature: domain Description: DUF3886 Location: 3532-3730 bp Feature: domain Description: DUF3886 Location: 3532-3730 bp Feature: gene Location: 158268-159494 bp Feature: domain Description: PRK13670 Location: 158271-159465 bp Feature: domain Description: PRK13670 Location: 158271-159465 bp Feature: gene Location: 159644-160774 bp Feature: domain Description: Arm-DNA-bind_4 Location: 159674-159806 bp Feature: domain Description: Arm-DNA-bind_4 Location: 159674-159806 bp Feature: domain Description: Phage_int_SAM_3 Location: 159833-160001 bp Feature: domain Description: Phage_int_SAM_3 Location: 159833-160001 bp Feature: domain Description: INT_ICEBs1_C_like Location: 160160-160667 bp Feature: domain Description: INT_ICEBs1_C_like Location: 160160-160667 bp Feature: gene Location: 160895-162835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 161225-162062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 161225-162062 bp Feature: domain Description: Intron_maturas2 Location: 162200-162491 bp Feature: domain Description: Intron_maturas2 Location: 162200-162491 bp Feature: domain Description: HNHc Note: nucleases Location: 162623-162782 bp Feature: domain Description: HNHc Note: nucleases Location: 162623-162782 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), MPP_YhcR_N (cd07412), DUF3886 (pfam13025), PRK13670 (nucleotidyltransferase), Arm-DNA-bind_4 (pfam14657), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189)

Seq: NFEP01000049.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000049, whole genome shotgun sequence (78990 bp)
Overview 1 RT 1: 581-3359 bp Neighborhood of RT #1 [581, 3367] RVT-GII Intron_maturas2 HNHc glpT DUF4027 Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2626-3123 bp Feature: domain Description: glpT Location: 2644-3115 bp Feature: domain Description: glpT Location: 2644-3115 bp Feature: gene Location: 3242-3367 bp Feature: domain Description: DUF4027 Location: 3254-3359 bp Feature: domain Description: DUF4027 Location: 3254-3359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT glpT (TIGR00712), DUF4027 (pfam13219), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEP01000181.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000181, whole genome shotgun sequence (5788 bp)
Overview 1 RT 1: 101-5788 bp Neighborhood of RT #1 [101, 5788] RVT-GII HNHc CwlT_like Feature: gene Location: 101-1906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 395-1091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 395-1091 bp Feature: domain Description: HNHc Note: nucleases Location: 1652-1790 bp Feature: domain Description: HNHc Note: nucleases Location: 1652-1790 bp Feature: gene Location: 2580-3575 bp Feature: domain Description: CwlT_like Location: 3429-3552 bp Feature: domain Description: CwlT_like Location: 342 9-3552 bp Feature: gene Location: 3572-5788 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), CwlT_like

Seq: NFEP01000232.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000232, whole genome shotgun sequence (4819 bp)
Overview 1 RT 1: 1-4819 bp Neighborhood of RT #1 [1, 4819] KOG4768 RVT-GII HNHc Feature: gene Location: 1-705 bp Feature: domain Description: KOG4768 Location: 61-700 bp Feature: domain Description: KOG4768 Location: 61-700 bp Feature: gene Location: 1672-3462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1969-2665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1969-2665 bp Feature: domain Description: HNHc Note: nucleases Location: 3205-3337 bp Feature: domain Description: HNHc Note: nucleases Location: 3205-3337 bp Feature: gene Location: 3528-3965 bp Feature: gene Location: 4638-4819 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), KOG4768 (KOG4768, Mitochondrial mRNA maturase )

Seq: NFEP01000224.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000224, whole genome shotgun sequence (15571 bp)
Overview 1 RT 1: 12481-15570 bp Neighborhood of RT #1 [12481, 15571] RVT-GII Feature: gene Location: 12481-12867 bp Feature: gene Location: 12885-14030 bp Feature: gene Location: 14631-15571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14901-15570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14901-15570 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NFEP01000182.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000182, whole genome shotgun sequence (7271 bp)
Overview 1 RT 1: 709-6973 bp Neighborhood of RT #1 [709, 6973] RVT-GII HNHc CwlT_like RVT-GII Intron_maturas2 HNHc NlpD Spr Feature: gene Location: 709-2514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1003-1699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1003-1699 bp Feature: domain Description: HNHc Note: nucleases Location: 2260-2398 bp Feature: domain Description: HNHc Note: nucleases Location: 2260-2398 bp Feature: gene Location: 2630-2947 bp Feature: domain Description: CwlT_like Location: 2672-2936 bp Feature: domain Description: CwlT_like Location: 2672-2936 bp Feature: gene Location: 3523-5346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3787-4621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3787-4621 bp Feature: domain Description: Intron_maturas2 Location: 4690-5029 bp Feature: domain Description: Intron_maturas2 Location: 4690-5029 bp Feature: domain Description: HNHc Note: nucleases Location: 5167-5323 bp Feature: domain Description: HNHc Note: nucleases Location: 5167-5323 bp Feature: gene Location: 5506-6381 bp Feature: domain Description: NlpD Location: 5521-5950 bp Feature: domain Description: NlpD Location: 5521-5950 bp Feature: domain Description: Spr Location: 5986-6322 bp Feature: domain Description: Spr Location: 5986-6322 bp Feature: gene Location: 6398-6973 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CwlT_like, RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), NlpD (COG0739), Spr (COG0791)

Seq: NFEP01000037.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000037, whole genome shotgun sequence (57356 bp)
Overview 1 RT 1: 581-4164 bp Neighborhood of RT #1 [581, 4193] RVT-GII Intron_maturas2 HNHc PRK09419 DUF4250 RHH_3 Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-246 8 bp Feature: gene Location: 2638-3591 bp Feature: domain Description: PRK09419 Location: 2647-3586 bp Feature: domain Description: PRK09419 Location: 2647-3586 bp Feature: gene Location: 3717-4193 bp Feature: domain Description: DUF4250 Location: 3774-3858 bp Feature: domain Description: DUF4250 Location: 3774-3858 bp Feature: domain Description: RHH_3 Location: 4035-4164 bp Feature: domain Description: RHH_3 Location: 4035-4164 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09419 (multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase/5'-nucleotidase), DUF4250 (pfam14056), RHH_3 (pfam12651), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEP01000054.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000054, whole genome shotgun sequence (6660 bp)
Overview 1 RT 1: 117-4980 bp Neighborhood of RT #1 [117, 5066] RVT-GII Intron_maturas2 HNHc Bacillus_HBL Chondroitinas_B Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447 -1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: gene Location: 2638-3174 bp Feature: domain Description: Bacillus_HBL Location: 2755-3172 bp Feature: domain Description: Bacillus_HBL Location: 2755-3172 bp Feature: gene Location: 4542-5066 bp Feature: domain Description: Chondroitinas_B Location: 4740-4980 bp Feature: domain Description: Chondroitinas_B Location: 47 40-4980 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Bacillus_HBL (pfam05791), Chondroitinas_B (pfam14592)

Seq: NFEP01000234.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000234, whole genome shotgun sequence (5383 bp)
Overview 1 RT 1: 107-4658 bp Neighborhood of RT #1 [107, 4687] RVT-GII HNHc RVT-GII Intron_maturas2 HNHc Feature: gene Location: 107-1897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404-1100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404-1100 bp Feature: domain Description: HNHc Note: nucleases Location: 1640-1772 bp Feature: domain Description: HNHc Note: nucleases Location: 1640-1772 bp Feature: gene Location: 2864-4687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3134-3962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3134-3962 bp Feature: domain Description: Intron_maturas2 Location: 4034-4352 bp Feature: domain Description: Intron_maturas2 Location: 4034-4352 bp Feature: domain Description: HNHc Note: nucleases Location: 4505-4658 bp Feature: domain Description: HNHc Note: nucleases Location: 4505-4658 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Intron_maturas2 (pfam01348)

Seq: NFEP01000172.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000172, whole genome shotgun sequence (4129 bp)
Overview 1 RT 1: 1-3960 bp Neighborhood of RT #1 [1, 4013] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1-819 bp Feature: gene Location: 944-1492 bp Feature: gene Location: 2073-4013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2403-3240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2403-3240 bp Feature: domain Description: Intron_maturas2 Location: 3378-3669 bp Feature: domain Description: Intron_maturas2 Location: 3378-3669 bp Feature: domain Description: HNHc Note: nucleases Location: 3801-3960 bp Feature: domain Description: HNHc Note: nucleases Location: 3801-3960 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEP01000270.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000270, whole genome shotgun sequence (8367 bp)
Overview 1 RT 1: 3466-8151 bp Neighborhood of RT #1 [3466, 8267] VirB4_CagE Lysozyme_like RVT-GII HNHc Feature: gene Location: 3466-5400 bp Feature: domain Description: VirB4_CagE Location: 3796-5311 bp Feature: domain Description: VirB4_CagE Location: 3796-5311 bp Feature: gene Location: 5402-5788 bp Feature: domain Description: Lysozyme_like Location: 5621-5768 bp Feature: domain Description: Lysozyme_like Location: 5621-5768 bp Feature: gene Location: 6462-8267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6756-7452 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6756-7452 bp Feature: domain Description: HNHc Note: nucleases Location: 8013-8151 bp Feature: domain Description: HNHc Note: nucleases Location: 8013-8151 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirB4_CagE (TIGR00929), Lysozyme_like (pfam13702), RVT-GII, HNHc (smart00507)

Seq: NFEP01000053.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000053, whole genome shotgun sequence (7404 bp)
Overview 1 RT 1: 117-3645 bp Neighborhood of RT #1 [117, 3645] RVT-GII Intron_maturas2 HNHc NO_synthase Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: gene Location: 2542-3426 bp Feature: domain Description: NO_synthase Location: 2554-3331 bp Feature: domain Description: NO_synthase Location: 2554-3331 bp Feature: gene Location: 3459-3645 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), NO_synthase (pfam02898)

Seq: NFEP01000205.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000205, whole genome shotgun sequence (17482 bp)
Overview 1 RT 1: 1-4445 bp 2 RT 2: 14261-17313 bp Neighborhood of RT #1 [1, 4445] RVT-GII GIIM HNHc TraG-D_C Ftsk_gamma Neighborhood of RT #2 [14261, 17366] E1_enzyme_family RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1-1380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10-511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10-511 bp Feature: domain Description: GIIM Note: maturase Location: 625-793 bp Feature: domain Description: GIIM Note: maturase Location: 625-793 bp Feature: domain Description: HNHc Note: nucleases Location: 1141-1306 bp Feature: domain Description: HNHc Note: nucleases Location: 1141-1306 bp Feature: gene Location: 1532-3403 bp Feature: domain Description: TraG-D_C Location: 1625-1940 bp Feature: domain Description: TraG-D_C Location: 1625-1940 bp Feature: domain Description: Ftsk_gamma Location: 2348-2528 bp Feature: domain Description: Ftsk_gamma Location: 2348-252 8 bp Feature: gene Location: 3675-4445 bp Feature: gene Location: 14261-14662 bp Feature: gene Location: 14675-14857 bp Feature: domain Description: E1_enzyme_family Location: 14723-14840 bp Feature: domain Description: E1_enzyme_family Location: 14723-14840 bp Feature: gene Location: 15426-17366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15756-16593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15756-16593 bp Feature: domain Description: Intron_maturas2 Location: 16731-17022 bp Feature: domain Description: Intron_maturas2 Location: 16731-17022 bp Feature: domain Description: HNHc Note: nucleases Location: 17154-17313 bp Feature: domain Description: HNHc Note: nucleases Location: 17154-17313 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), E1_enzyme_family (cl22428), Intron_maturas2 (pfam01348)

Seq: NFEP01000028.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000028, whole genome shotgun sequence (7049 bp)
Overview 1 RT 1: 2184-6416 bp Neighborhood of RT #1 [2184, 6469] Replic_Relax RVT-GII Intron_maturas2 HNHc Feature: gene Location: 2184-2498 bp Feature: gene Location: 2606-3883 bp Feature: domain Description: Replic_Relax Location: 2690-3236 bp Feature: domain Description: Replic_Relax Location: 2690-3236 bp Feature: gene Location: 4529-6469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4859-5696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4859-5696 bp Feature: domain Description: Intron_maturas2 Location: 5834-6125 bp Feature: domain Description: Intron_maturas2 Location: 5834-6125 bp Feature: domain Description: HNHc Note: nucleases Location: 6257-6416 bp Feature: domain Description: HNHc Note: nucleases Location: 6257-6416 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Replic_Relax (pfam13814), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEP01000200.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000200, whole genome shotgun sequence (19832 bp)
Overview 1 RT 1: 10002-15753 bp Neighborhood of RT #1 [10002, 15782] RVT-GII HNHc LPD1 DUF3854 Feature: gene Location: 10002-11093 bp Feature: gene Location: 11528-11782 bp Feature: gene Location: 11814-13610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12108-12804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12108-12804 bp Feature: domain Description: HNHc Note: nucleases Location: 13404-13479 bp Feature: domain Description: HNHc Note: nucleases Location: 13404-13479 bp Feature: gene Location: 13682-14479 bp Feature: domain Description: LPD1 Location: 14228-14423 bp Feature: domain Description: LPD1 Location: 14228-14423 bp Feature: gene Location: 14469-15782 bp Feature: domain Description: DUF3854 Location: 15414-15753 bp Feature: domain Description: DUF3854 Location: 154 14-15753 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), LPD1 (pfam18796), DUF3854 (pfam12965)

Seq: NFEP01000024.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000024, whole genome shotgun sequence (5050 bp)
Overview 1 RT 1: 2146-5049 bp Neighborhood of RT #1 [2146, 5050] RVT-GII Feature: gene Location: 2146-2346 bp Feature: gene Location: 2364-3509 bp Feature: gene Location: 4110-5050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4380-5049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4380-5049 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NFEP01000264.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000264, whole genome shotgun sequence (162493 bp)
Overview 1 RT 1: 581-3678 bp 2 RT 2: 157149-162324 bp Neighborhood of RT #1 [581, 3678] RVT-GII Intron_maturas2 HNHc Neighborhood of RT #2 [157149, 162377] CwlA SH3_3 SLH SLH SLH RVT-GII Intron_maturas2 HNHc Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2638-2895 bp Feature: gene Location: 3400-3678 bp Feature: gene Location: 157149-157607 bp Feature: gene Location: 158414-159721 bp Feature: domain Description: CwlA Location: 158453-158945 bp Feature: domain Description: CwlA Location: 158453-158945 bp Feature: domain Description: SH3_3 Location: 159005-159131 bp Feature: domain Description: SH3_3 Location: 159005-159131 bp Feature: domain Description: SLH Location: 159203-159320 bp Feature: domain Description: SLH Location: 159203-159320 bp Feature: domain Description: SLH Location: 159365-159494 bp Feature: domain Description: SLH Location: 159365-159494 bp Feature: domain Description: SLH Location: 159557-159683 bp Feature: domain Description: SLH Location: 159557-159683 bp Feature: gene Location: 160437-162377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 160767-161604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 160767-161604 bp Feature: domain Description: Intron_maturas2 Location: 161742-162033 bp Feature: domain Description: Intron_maturas2 Location: 161742-162033 bp Feature: domain Description: HNHc Note: nucleases Location: 162165-162324 bp Feature: domain Description: HNHc Note: nucleases Location: 162165-162324 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), CwlA (COG5632), SH3_3 (pfam08239), SLH (pfam00395)

Seq: NFEP01000046.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000046, whole genome shotgun sequence (10103 bp)
Overview 1 RT 1: 581-3706 bp Neighborhood of RT #1 [581, 3706] RVT-GII Intron_maturas2 HNHc PRTRC_ThiF Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2773-3315 bp Feature: domain Description: PRTRC_ThiF Location: 2836-3292 bp Feature: domain Description: PRTRC_ThiF Location: 2836-3292 bp Feature: gene Location: 3335-3706 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRTRC_ThiF (TIGR03736), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEP01000207.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000207, whole genome shotgun sequence (2763 bp)
Overview 1 RT 1: 235-2035 bp Neighborhood of RT #1 [235, 2109] RVT-GII GIIM HNHc Feature: gene Location: 235-2109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 535-1240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 535-1240 bp Feature: domain Description: GIIM Note: maturase Location: 1354-1522 bp Feature: domain Description: GIIM Note: maturase Location: 1354-1522 bp Feature: domain Description: HNHc Note: nucleases Location: 1870-2035 bp Feature: domain Description: HNHc Note: nucleases Location: 1870-2035 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NFEP01000056.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000056, whole genome shotgun sequence (14216 bp)
Overview 1 RT 1: 117-4320 bp Neighborhood of RT #1 [117, 4325] RVT-GII Intron_maturas2 HNHc PRK06172 thiol_BshB2 Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: gene Location: 2807-3550 bp Feature: domain Description: PRK06172 Location: 2810-3545 bp Feature: domain Description: PRK06172 Location: 2810-3545 bp Feature: gene Location: 3663-4325 bp Feature: domain Description: thiol_BshB2 Location: 3672-4320 bp Feature: domain Description: thiol_BshB2 Location: 3672-4320 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK06172 (SDR family oxidoreductase), thiol_BshB2 (TIGR04000)

Seq: NFEP01000052.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000052, whole genome shotgun sequence (42617 bp)
Overview 1 RT 1: 117-3137 bp Neighborhood of RT #1 [117, 3151] RVT-GII Intron_maturas2 HNHc Tautomerase_2 YurZ Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: gene Location: 2639-2839 bp Feature: domain Description: Tautomerase_2 Location: 2642-2795 bp Feature: domain Description: Tautomerase_2 Location: 2642-2795 bp Feature: gene Location: 2843-3151 bp Feature: domain Description: YurZ Location: 2858-3137 bp Feature: domain Description: YurZ Location: 2858-3137 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Tautomerase_2 (pfam14552), YurZ (COG0599)

Seq: NFEP01000042.1 Bacillus thuringiensis serovar aizawai strain T07019 T07019_contig000042, whole genome shotgun sequence (31735 bp)
Overview 1 RT 1: 581-3554 bp Neighborhood of RT #1 [581, 3661] RVT-GII Intron_maturas2 HNHc T7_EssCb_Firm Replic_Relax Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2638-3099 bp Feature: domain Description: T7_EssCb_Firm Location: 2656-2956 bp Feature: domain Description: T7_EssCb_Firm Location: 2656-2956 bp Feature: gene Location: 3041-3661 bp Feature: domain Description: Replic_Relax Location: 3089-3554 bp Feature: domain Description: Replic_Relax Location: 3089-3554 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T7_EssCb_Firm (TIGR03928), Replic_Relax (pfam13814), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)