myRT

myRT report for GCA_002147605.1_ASM214760v1

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Seq: NFEQ01000090.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000090, whole genome shotgun sequence (39873 bp)
Overview 1 RT 1: 581-3663 bp Neighborhood of RT #1 [581, 3734] RVT-GII Intron_maturas2 HNHc DnaD_dom Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 1 -1 748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1 886-21 77 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2736-2862 bp Feature: gene Location: 2952-3734 bp Feature: domain Description: DnaD_dom Location: 3480-3663 bp Feature: domain Description: DnaD_dom Location: 3480-3663 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DnaD_dom (TIGR01446), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEQ01000134.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000134, whole genome shotgun sequence (28563 bp)
Overview 1 RT 1: 24852-28394 bp Neighborhood of RT #1 [24852, 28447] Acetyltransf_8 nicotinamidase_related RVT-GII Intron_maturas2 HNHc Feature: gene Location: 24852-25388 bp Feature: domain Description: Acetyltransf_8 Location: 24894-25323 bp Feature: domain Description: Acetyltransf_8 Location: 2 4894-2 532 3 bp Feature: gene Location: 25423-25938 bp Feature: domain Description: nicotinamidase_related Location: 25435-25885 bp Feature: domain Description: nicotinamidase_related Location: 2 5435-2 5885 bp Feature: gene Location: 26507-28447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26837-27674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6837-2 7674 bp Feature: domain Description: Intron_maturas2 Location: 27812-28103 bp Feature: domain Description: Intron_maturas2 Location: 2 7812 -2 8103 bp Feature: domain Description: HNHc Note: nucleases Location: 28235-28394 bp Feature: domain Description: HNHc Note: nucleases Location: 2 82 35-2 8394 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_8 (pfam13523), nicotinamidase_related (cd01014), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEQ01000079.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000079, whole genome shotgun sequence (7404 bp)
Overview 1 RT 1: 117-3645 bp Neighborhood of RT #1 [117, 3645] RVT-GII Intron_maturas2 HNHc NO_synthase Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: gene Location: 2542-3426 bp Feature: domain Description: NO_synthase Location: 2554-3331 bp Feature: domain Description: NO_synthase Location: 2554-3 3 3 1 bp Feature: gene Location: 3459-3645 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), NO_synthase (pfam02898)

Seq: NFEQ01000234.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000234, whole genome shotgun sequence (12090 bp)
Overview 1 RT 1: 117-3655 bp Neighborhood of RT #1 [117, 3655] RVT-GII Intron_maturas2 HNHc FtsK_SpoIIIE Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 4 7-1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 14 22-1713 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 184 5-2004 bp Feature: gene Location: 2626-3357 bp Feature: domain Description: FtsK_SpoIIIE Location: 3004-3334 bp Feature: domain Description: FtsK_SpoIIIE Location: 3004 -3334 bp Feature: gene Location: 3473-3655 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), FtsK_SpoIIIE (pfam01580)

Seq: NFEQ01000088.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000088, whole genome shotgun sequence (7049 bp)
Overview 1 RT 1: 581-4866 bp Neighborhood of RT #1 [581, 4866] RVT-GII Intron_maturas2 HNHc Replic_Relax Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 3167-4444 bp Feature: domain Description: Replic_Relax Location: 3251-3797 bp Feature: domain Description: Replic_Relax Location: 325 1-3797 bp Feature: gene Location: 4552-4866 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Replic_Relax (pfam13814), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEQ01000197.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000197, whole genome shotgun sequence (10369 bp)
Overview 1 RT 1: 135-8655 bp Neighborhood of RT #1 [135, 8655] DUF3854 RVT-GII HNHc LPD1 RVT-GII HNHc Feature: gene Location: 135-629 bp Feature: domain Description: DUF3854 Location: 258-600 bp Feature: domain Description: DUF3854 Location: 258-6 00 bp Feature: gene Location: 753-2585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1065-1764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106 5-176 4 bp Feature: domain Description: HNHc Note: nucleases Location: 2304-2469 bp Feature: domain Description: HNHc Note: nucleases Location: 2304-246 9 bp Feature: gene Location: 3358-4188 bp Feature: gene Location: 4178-4975 bp Feature: domain Description: LPD1 Location: 4724-4919 bp Feature: domain Description: LPD1 Location: 4724-4919 bp Feature: gene Location: 5047-6843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5341-6037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5341-6 037 bp Feature: domain Description: HNHc Note: nucleases Location: 6637-6712 bp Feature: domain Description: HNHc Note: nucleases Location: 6 6 37-6 712 bp Feature: gene Location: 6875-7129 bp Feature: gene Location: 7564-8655 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LPD1 (pfam18796), RVT-GII, HNHc (smart00507)

Seq: NFEQ01000129.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000129, whole genome shotgun sequence (5720 bp)
Overview 1 RT 1: 655-5551 bp Neighborhood of RT #1 [655, 5604] Chondroitinas_B Bacillus_HBL RVT-GII Intron_maturas2 HNHc Feature: gene Location: 655-1179 bp Feature: domain Description: Chondroitinas_B Location: 853-1093 bp Feature: domain Description: Chondroitinas_B Location: 853-1093 bp Feature: gene Location: 2547-3083 bp Feature: domain Description: Bacillus_HBL Location: 2664-3081 bp Feature: domain Description: Bacillus_HBL Location: 2664-3081 bp Feature: gene Location: 3664-5604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3994-4831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3994-4831 bp Feature: domain Description: Intron_maturas2 Location: 4969-5260 bp Feature: domain Description: Intron_maturas2 Location: 4969-5260 bp Feature: domain Description: HNHc Note: nucleases Location: 5392-5551 bp Feature: domain Description: HNHc Note: nucleases Location: 5392-5551 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bacillus_HBL (pfam05791), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Chondroitinas_B (pfam14592)

Seq: NFEQ01000122.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000122, whole genome shotgun sequence (74608 bp)
Overview 1 RT 1: 69761-73975 bp Neighborhood of RT #1 [69761, 74028] BCCT COG4362 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 69761-71329 bp Feature: domain Description: BCCT Location: 69797-71240 bp Feature: domain Description: BCCT Location: 69797-71240 bp Feature: gene Location: 71690-71977 bp Feature: domain Description: COG4362 Location: 71699-71975 bp Feature: domain Description: COG4362 Location: 71699-71975 bp Feature: gene Location: 72088-74028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72418-73255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72418 -73255 bp Feature: domain Description: Intron_maturas2 Location: 73393-73684 bp Feature: domain Description: Intron_maturas2 Location: 73393-7368 4 bp Feature: domain Description: HNHc Note: nucleases Location: 73816-73975 bp Feature: domain Description: HNHc Note: nucleases Location: 738 16-73975 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BCCT (pfam02028), COG4362 (Nitric oxide synthase, oxygenase domain ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEQ01000082.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000082, whole genome shotgun sequence (8184 bp)
Overview 1 RT 1: 581-3656 bp Neighborhood of RT #1 [581, 3679] RVT-GII Intron_maturas2 HNHc Tar SASP Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9 11-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309 -2468 bp Feature: gene Location: 2638-3297 bp Feature: domain Description: Tar Location: 2644-3289 bp Feature: domain Description: Tar Location: 2644-3289 bp Feature: gene Location: 3464-3679 bp Feature: domain Description: SASP Location: 3494-3656 bp Feature: domain Description: SASP Location: 349 4-3656 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tar (COG0840), SASP (pfam00269), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEQ01000195.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000195, whole genome shotgun sequence (7325 bp)
Overview 1 RT 1: 1-6402 bp Neighborhood of RT #1 [1, 6402] TrbL TraC-F-type RVT-GII HNHc TraC-F-type Feature: gene Location: 1-653 bp Feature: domain Description: TrbL Location: 292-652 bp Feature: domain Description: TrbL Location: 292-652 bp Feature: gene Location: 684-1652 bp Feature: domain Description: TraC-F-type Location: 711-1491 bp Feature: domain Description: TraC-F-type Location: 711-1491 bp Feature: gene Location: 1944-3776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2244-2949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2244-2949 bp Feature: domain Description: HNHc Note: nucleases Location: 3528-3660 bp Feature: domain Description: HNHc Note: nucleases Location: 3528-3660 bp Feature: gene Location: 4505-5485 bp Feature: domain Description: TraC-F-type Location: 4934-5408 bp Feature: domain Description: TraC-F-type Location: 4934-5408 bp Feature: gene Location: 5488-6402 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TrbL (pfam04610), RVT-GII, HNHc (smart00507), TraC-F-type (TIGR02746)

Seq: NFEQ01000078.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000078, whole genome shotgun sequence (42598 bp)
Overview 1 RT 1: 117-3137 bp Neighborhood of RT #1 [117, 3151] RVT-GII Intron_maturas2 HNHc Tautomerase_2 YurZ Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: gene Location: 2639-2839 bp Feature: domain Description: Tautomerase_2 Location: 2642-2795 bp Feature: domain Description: Tautomerase_2 Location: 2642-2795 bp Feature: gene Location: 2843-3151 bp Feature: domain Description: YurZ Location: 2858-3137 bp Feature: domain Description: YurZ Location: 2858-3137 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Tautomerase_2 (pfam14552), YurZ (COG0599)

Seq: NFEQ01000246.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000246, whole genome shotgun sequence (23355 bp)
Overview 1 RT 1: 117-3878 bp Neighborhood of RT #1 [117, 3904] RVT-GII Intron_maturas2 HNHc ThiF InsQ Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-12 84 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: gene Location: 2644-3120 bp Feature: domain Description: ThiF Location: 2995-3121 bp Feature: domain Description: ThiF Location: 2995-312 1 bp Feature: gene Location: 3350-3904 bp Feature: domain Description: InsQ Location: 3398-3878 bp Feature: domain Description: InsQ Location: 3398-3878 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), ThiF (pfam00899), InsQ (COG0675)

Seq: NFEQ01000084.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000084, whole genome shotgun sequence (57341 bp)
Overview 1 RT 1: 581-4164 bp Neighborhood of RT #1 [581, 4193] RVT-GII Intron_maturas2 HNHc PRK09419 DUF4250 RHH_3 Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2638-3591 bp Feature: domain Description: PRK09419 Location: 2647-3586 bp Feature: domain Description: PRK09419 Location: 2647-3586 bp Feature: gene Location: 3717-4193 bp Feature: domain Description: DUF4250 Location: 3774-3858 bp Feature: domain Description: DUF4250 Location: 3774-3858 bp Feature: domain Description: RHH_3 Location: 4035-4164 bp Feature: domain Description: RHH_3 Location: 4035-4164 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09419 (multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase/5'-nucleotidase), DUF4250 (pfam14056), RHH_3 (pfam12651), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEQ01000046.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000046, whole genome shotgun sequence (48845 bp)
Overview 1 RT 1: 45331-48676 bp Neighborhood of RT #1 [45331, 48729] RimL NIPSNAP RVT-GII Intron_maturas2 HNHc Feature: gene Location: 45331-45927 bp Feature: domain Description: RimL Location: 45586-45883 bp Feature: domain Description: RimL Location: 45586-45883 bp Feature: gene Location: 45900-46220 bp Feature: domain Description: NIPSNAP Location: 45924-46128 bp Feature: domain Description: NIPSNAP Location: 45924-46128 bp Feature: gene Location: 46789-48729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47119-47956 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47119-47956 bp Feature: domain Description: Intron_maturas2 Location: 48094-48385 bp Feature: domain Description: Intron_maturas2 Location: 48094-48385 bp Feature: domain Description: HNHc Note: nucleases Location: 48517-48676 bp Feature: domain Description: HNHc Note: nucleases Location: 48517-48676 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RimL (COG1670), NIPSNAP (pfam07978), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEQ01000016.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000016, whole genome shotgun sequence (20406 bp)
Overview 1 RT 1: 16515-20237 bp Neighborhood of RT #1 [16515, 20290] DegV RVT-GII Intron_maturas2 HNHc Feature: gene Location: 16515-17321 bp Feature: domain Description: DegV Location: 16536-17319 bp Feature: domain Description: DegV Location: 16536-17319 bp Feature: gene Location: 17614-17769 bp Feature: gene Location: 18350-20290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18680-19517 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18680-19517 bp Feature: domain Description: Intron_maturas2 Location: 19655-19946 bp Feature: domain Description: Intron_maturas2 Location: 19655-19946 bp Feature: domain Description: HNHc Note: nucleases Location: 20078-20237 bp Feature: domain Description: HNHc Note: nucleases Location: 20078-20237 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DegV (TIGR00762), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEQ01000128.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000128, whole genome shotgun sequence (17605 bp)
Overview 1 RT 1: 13292-16972 bp Neighborhood of RT #1 [13292, 17025] SIR2-like DUF2512 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 13292-14203 bp Feature: domain Description: SIR2-like Location: 13382-14075 bp Feature: domain Description: SIR2-like Location: 13382-14075 bp Feature: gene Location: 14355-14792 bp Feature: domain Description: DUF2512 Location: 14364-14760 bp Feature: domain Description: DUF2512 Location: 14364-14760 bp Feature: gene Location: 15085-17025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15415-16252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15415-16 252 bp Feature: domain Description: Intron_maturas2 Location: 16390-16681 bp Feature: domain Description: Intron_maturas2 Location: 16 390-16 681 bp Feature: domain Description: HNHc Note: nucleases Location: 16813-16972 bp Feature: domain Description: HNHc Note: nucleases Location: 16 813-16 972 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SIR2-like (cd01406), DUF2512 (pfam10710), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEQ01000044.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000044, whole genome shotgun sequence (20335 bp)
Overview 1 RT 1: 16107-20166 bp Neighborhood of RT #1 [16107, 20219] MarR glpT RVT-GII Intron_maturas2 HNHc Feature: gene Location: 16107-16565 bp Feature: domain Description: MarR Location: 16167-16521 bp Feature: domain Description: MarR Location: 16167-16521 bp Feature: gene Location: 16835-17698 bp Feature: domain Description: glpT Location: 16853-17699 bp Feature: domain Description: glpT Location: 16853-17 699 bp Feature: gene Location: 18279-20219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18609-19446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18609-19446 bp Feature: domain Description: Intron_maturas2 Location: 19584-19875 bp Feature: domain Description: Intron_maturas2 Location: 19584-19875 bp Feature: domain Description: HNHc Note: nucleases Location: 20007-20166 bp Feature: domain Description: HNHc Note: nucleases Location: 20007-20166 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MarR (pfam01047), glpT (TIGR00712), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEQ01000103.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000103, whole genome shotgun sequence (5744 bp)
Overview 1 RT 1: 477-5111 bp Neighborhood of RT #1 [477, 5164] DDE_Tnp_1 Endotoxin_N RVT-GII Intron_maturas2 HNHc Feature: gene Location: 477-1898 bp Feature: domain Description: DDE_Tnp_1 Location: 831-1626 bp Feature: domain Description: DDE_Tnp_1 Location: 831-1626 bp Feature: gene Location: 2522-3145 bp Feature: domain Description: Endotoxin_N Location: 2663-3110 bp Feature: domain Description: Endotoxin_N Location: 2663-3110 bp Feature: gene Location: 3224-5164 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3554-4391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3554-4391 bp Feature: domain Description: Intron_maturas2 Location: 4529-4820 bp Feature: domain Description: Intron_maturas2 Location: 4529-4820 bp Feature: domain Description: HNHc Note: nucleases Location: 4952-5111 bp Feature: domain Description: HNHc Note: nucleases Location: 4952-5111 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Endotoxin_N (pfam03945), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DDE_Tnp_1 (pfam01609)

Seq: NFEQ01000160.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000160, whole genome shotgun sequence (4654 bp)
Overview 1 RT 1: 56-4021 bp Neighborhood of RT #1 [56, 4074] HTH_28 HTH_28 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 56-1410 bp Feature: domain Description: HTH_28 Location: 80-218 bp Feature: domain Description: HTH_28 Location: 80-218 bp Feature: domain Description: HTH_28 Location: 245-404 bp Feature: domain Description: HTH_28 Location: 245-404 bp Feature: gene Location: 1444-2001 bp Feature: gene Location: 2134-4074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2464-3301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2464-3301 bp Feature: domain Description: Intron_maturas2 Location: 3439-3730 bp Feature: domain Description: Intron_maturas2 Location: 3439-3730 bp Feature: domain Description: HNHc Note: nucleases Location: 3862-4021 bp Feature: domain Description: HNHc Note: nucleases Location: 3862-4021 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), HTH_28 (pfam13518)

Seq: NFEQ01000175.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000175, whole genome shotgun sequence (8485 bp)
Overview 1 RT 1: 3424-8485 bp Neighborhood of RT #1 [3424, 8485] T_den_put_tspse DUF3854 RVT-GII HNHc Feature: gene Location: 3424-4359 bp Feature: domain Description: T_den_put_tspse Location: 3466-4342 bp Feature: domain Description: T_den_put_tspse Location: 3466-4342 bp Feature: gene Location: 4471-4965 bp Feature: domain Description: DUF3854 Location: 4594-4936 bp Feature: domain Description: DUF3854 Location: 4594-4936 bp Feature: gene Location: 5089-6921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5401-6100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5401-6100 bp Feature: domain Description: HNHc Note: nucleases Location: 6640-6805 bp Feature: domain Description: HNHc Note: nucleases Location: 6640-6805 bp Feature: gene Location: 7694-8485 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T_den_put_tspse (TIGR01784), DUF3854 (pfam12965), RVT-GII, HNHc (smart00507)

Seq: NFEQ01000017.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000017, whole genome shotgun sequence (4689 bp)
Overview 1 RT 1: 10-4468 bp Neighborhood of RT #1 [10, 4584] CwlT_like RVT-GII HNHc Feature: gene Location: 10-1113 bp Feature: gene Location: 1110-2105 bp Feature: domain Description: CwlT_like Location: 1959-2082 bp Feature: domain Description: CwlT_like Location: 1959-2082 bp Feature: gene Location: 2779-4584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3073-3769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3073-3769 bp Feature: domain Description: HNHc Note: nucleases Location: 4330-4468 bp Feature: domain Description: HNHc Note: nucleases Location: 4330-4468 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CwlT_like, RVT-GII, HNHc (smart00507)

Seq: NFEQ01000061.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000061, whole genome shotgun sequence (71229 bp)
Overview 1 RT 1: 67483-70596 bp Neighborhood of RT #1 [67483, 70649] EFh_HEF_SCGN RVT-GII Intron_maturas2 HNHc Feature: gene Location: 67483-67599 bp Feature: gene Location: 68065-68547 bp Feature: domain Description: EFh_HEF_SCGN Location: 68143-68398 bp Feature: domain Description: EFh_HEF_SCGN Location: 68143-68398 bp Feature: gene Location: 68709-70649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69039-69876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69039-69876 bp Feature: domain Description: Intron_maturas2 Location: 70014-70305 bp Feature: domain Description: Intron_maturas2 Location: 70014-70305 bp Feature: domain Description: HNHc Note: nucleases Location: 70437-70596 bp Feature: domain Description: HNHc Note: nucleases Location: 70437-70596 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EFh_HEF_SCGN (cd16178), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEQ01000181.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000181, whole genome shotgun sequence (8561 bp)
Overview 1 RT 1: 697-8253 bp Neighborhood of RT #1 [697, 8327] RVT-GII Intron_maturas2 HNHc RVT-GII HNHc RVT-GII GIIM HNHc Feature: gene Location: 697-2520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 967-1795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 967-1795 bp Feature: domain Description: Intron_maturas2 Location: 1867-2185 bp Feature: domain Description: Intron_maturas2 Location: 1867-2185 bp Feature: domain Description: HNHc Note: nucleases Location: 2338-2491 bp Feature: domain Description: HNHc Note: nucleases Location: 23 38-2491 bp Feature: gene Location: 3487-5277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3784-4480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3784-4480 bp Feature: domain Description: HNHc Note: nucleases Location: 5020-5152 bp Feature: domain Description: HNHc Note: nucleases Location: 5020-5152 bp Feature: gene Location: 5343-5780 bp Feature: gene Location: 6453-8327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6753-7458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6753-7458 bp Feature: domain Description: GIIM Note: maturase Location: 7572-7740 bp Feature: domain Description: GIIM Note: maturase Location: 7572-7740 bp Feature: domain Description: HNHc Note: nucleases Location: 8088-8253 bp Feature: domain Description: HNHc Note: nucleases Location: 8088-8253 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Intron_maturas2 (pfam01348), GIIM (pfam08388)

Seq: NFEQ01000087.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000087, whole genome shotgun sequence (32778 bp)
Overview 1 RT 1: 581-5380 bp Neighborhood of RT #1 [581, 5385] RVT-GII Intron_maturas2 HNHc COG4932 COG4932 Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-24 68 bp Feature: gene Location: 3007-4155 bp Feature: domain Description: COG4932 Location: 3052-4144 bp Feature: domain Description: COG4932 Location: 3052-4144 bp Feature: gene Location: 4843-5385 bp Feature: domain Description: COG4932 Location: 4849-5380 bp Feature: domain Description: COG4932 Location: 4849-5380 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4932 (Uncharacterized surface anchored protein ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEQ01000183.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000183, whole genome shotgun sequence (8796 bp)
Overview 1 RT 1: 107-6651 bp Neighborhood of RT #1 [107, 6651] RVT-GII HNHc RVT-GII Intron_maturas2 HNHc Feature: gene Location: 107-1897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404-1100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404-1100 bp Feature: domain Description: HNHc Note: nucleases Location: 1640-1772 bp Feature: domain Description: HNHc Note: nucleases Location: 1640-1772 bp Feature: gene Location: 2864-4687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3134-3962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3134-3962 bp Feature: domain Description: Intron_maturas2 Location: 4034-4352 bp Feature: domain Description: Intron_maturas2 Location: 4034-4352 bp Feature: domain Description: HNHc Note: nucleases Location: 4505-4658 bp Feature: domain Description: HNHc Note: nucleases Location: 4505-4658 bp Feature: gene Location: 5288-6433 bp Feature: gene Location: 6451-6651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Intron_maturas2 (pfam01348)

Seq: NFEQ01000174.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000174, whole genome shotgun sequence (12103 bp)
Overview 1 RT 1: 7054-12103 bp Neighborhood of RT #1 [7054, 12103] T_den_put_tspse DUF3854 RVT-GII HNHc Feature: gene Location: 7054-7977 bp Feature: domain Description: T_den_put_tspse Location: 7096-7960 bp Feature: domain Description: T_den_put_tspse Location: 7096-7960 bp Feature: gene Location: 8089-8583 bp Feature: domain Description: DUF3854 Location: 8212-8554 bp Feature: domain Description: DUF3854 Location: 8212-8554 bp Feature: gene Location: 8707-10539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9019-9718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9019-9718 bp Feature: domain Description: HNHc Note: nucleases Location: 10258-10423 bp Feature: domain Description: HNHc Note: nucleases Location: 10258-10423 bp Feature: gene Location: 11312-12103 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T_den_put_tspse (TIGR01784), DUF3854 (pfam12965), RVT-GII, HNHc (smart00507)

Seq: NFEQ01000126.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000126, whole genome shotgun sequence (3976 bp)
Overview 1 RT 1: 434-3807 bp Neighborhood of RT #1 [434, 3860] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 434-919 bp Feature: gene Location: 1920-3860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2250-3087 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2250-3087 bp Feature: domain Description: Intron_maturas2 Location: 3225-3516 bp Feature: domain Description: Intron_maturas2 Location: 3225-3516 bp Feature: domain Description: HNHc Note: nucleases Location: 3648-3807 bp Feature: domain Description: HNHc Note: nucleases Location: 3648-3807 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEQ01000188.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000188, whole genome shotgun sequence (43978 bp)
Overview 1 RT 1: 25347-32576 bp 2 RT 2: 39485-43809 bp Neighborhood of RT #1 [25347, 32576] RVT-GII GIIM KOG1000 KOG1000 Neighborhood of RT #2 [39485, 43862] LolD LolE RVT-GII Intron_maturas2 HNHc Feature: gene Location: 25347-25574 bp Feature: gene Location: 25646-26539 bp Feature: gene Location: 27301-29166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27601-28306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27601-28 306 bp Feature: domain Description: GIIM Note: maturase Location: 28393-28576 bp Feature: domain Description: GIIM Note: maturase Location: 28 393-28 576 bp Feature: gene Location: 29441-31846 bp Feature: domain Description: KOG1000 Location: 30152-30368 bp Feature: domain Description: KOG1000 Location: 30152-30368 bp Feature: domain Description: KOG1000 Location: 30971-31304 bp Feature: domain Description: KOG1000 Location: 30971-31304 bp Feature: gene Location: 31863-32576 bp Feature: gene Location: 39485-40237 bp Feature: domain Description: LolD Location: 39500-40166 bp Feature: domain Description: LolD Location: 39500-40166 bp Feature: gene Location: 40245-41396 bp Feature: domain Description: LolE Location: 40257-41343 bp Feature: domain Description: LolE Location: 40257-41343 bp Feature: gene Location: 41922-43862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42252-43089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42252-43089 bp Feature: domain Description: Intron_maturas2 Location: 43227-43518 bp Feature: domain Description: Intron_maturas2 Location: 43227-43518 bp Feature: domain Description: HNHc Note: nucleases Location: 43650-43809 bp Feature: domain Description: HNHc Note: nucleases Location: 43650-43809 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), LolD (COG1136), LolE (COG4591), Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEQ01000189.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000189, whole genome shotgun sequence (10103 bp)
Overview 1 RT 1: 6398-9470 bp Neighborhood of RT #1 [6398, 9523] PRTRC_ThiF RVT-GII Intron_maturas2 HNHc Feature: gene Location: 6398-6769 bp Feature: gene Location: 6789-7331 bp Feature: domain Description: PRTRC_ThiF Location: 6852-7308 bp Feature: domain Description: PRTRC_ThiF Location: 6852-7308 bp Feature: gene Location: 7583-9523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7913-8750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7913-8750 bp Feature: domain Description: Intron_maturas2 Location: 8888-9179 bp Feature: domain Description: Intron_maturas2 Location: 8888-9179 bp Feature: domain Description: HNHc Note: nucleases Location: 9311-9470 bp Feature: domain Description: HNHc Note: nucleases Location: 9311-9470 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRTRC_ThiF (TIGR03736), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEQ01000089.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000089, whole genome shotgun sequence (78971 bp)
Overview 1 RT 1: 581-3359 bp Neighborhood of RT #1 [581, 3367] RVT-GII Intron_maturas2 HNHc glpT DUF4027 Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 230 9-2468 bp Feature: gene Location: 2626-3123 bp Feature: domain Description: glpT Location: 2644-3115 bp Feature: domain Description: glpT Location: 2644-3115 bp Feature: gene Location: 3242-3367 bp Feature: domain Description: DUF4027 Location: 3254-3359 bp Feature: domain Description: DUF4027 Location: 3254-3359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT glpT (TIGR00712), DUF4027 (pfam13219), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEQ01000029.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000029, whole genome shotgun sequence (55331 bp)
Overview 1 RT 1: 49933-55162 bp Neighborhood of RT #1 [49933, 55215] CcmA PRK12896 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 49933-50835 bp Feature: domain Description: CcmA Location: 49936-50806 bp Feature: domain Description: CcmA Location: 49936-50806 bp Feature: gene Location: 51041-51787 bp Feature: domain Description: PRK12896 Location: 51044-51782 bp Feature: domain Description: PRK12896 Location: 51044-51782 bp Feature: gene Location: 53275-55215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53605-54442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53605-54442 bp Feature: domain Description: Intron_maturas2 Location: 54580-54871 bp Feature: domain Description: Intron_maturas2 Location: 54580-54871 bp Feature: domain Description: HNHc Note: nucleases Location: 55003-55162 bp Feature: domain Description: HNHc Note: nucleases Location: 55003-55162 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CcmA (COG4133), PRK12896 (methionine aminopeptidase; Reviewed), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEQ01000213.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000213, whole genome shotgun sequence (8819 bp)
Overview 1 RT 1: 1-8521 bp Neighborhood of RT #1 [1, 8521] CwlT_like RVT-GII HNHc CwlT_like RVT-GII Intron_maturas2 HNHc NlpD Spr Feature: gene Location: 1-591 bp Feature: gene Location: 588-1583 bp Feature: domain Description: CwlT_like Location: 1437-1560 bp Feature: domain Description: CwlT_like Location: 1437-1560 bp Feature: gene Location: 2257-4062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2551-3247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2551-32 47 bp Feature: domain Description: HNHc Note: nucleases Location: 3808-3946 bp Feature: domain Description: HNHc Note: nucleases Location: 3808-3946 bp Feature: gene Location: 4178-4495 bp Feature: domain Description: CwlT_like Location: 4220-4484 bp Feature: domain Description: CwlT_like Location: 4220-4484 bp Feature: gene Location: 5071-6894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5335-6169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5335-6169 bp Feature: domain Description: Intron_maturas2 Location: 6238-6577 bp Feature: domain Description: Intron_maturas2 Location: 6238-6577 bp Feature: domain Description: HNHc Note: nucleases Location: 6715-6871 bp Feature: domain Description: HNHc Note: nucleases Location: 6715-6871 bp Feature: gene Location: 7054-7929 bp Feature: domain Description: NlpD Location: 7069-7498 bp Feature: domain Description: NlpD Location: 7069-7498 bp Feature: domain Description: Spr Location: 7534-7870 bp Feature: domain Description: Spr Location: 7534-7870 bp Feature: gene Location: 7946-8521 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), CwlT_like, Intron_maturas2 (pfam01348), NlpD (COG0739), Spr (COG0791)

Seq: NFEQ01000231.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000231, whole genome shotgun sequence (162493 bp)
Overview 1 RT 1: 581-3678 bp 2 RT 2: 157149-162324 bp Neighborhood of RT #1 [581, 3678] RVT-GII Intron_maturas2 HNHc Neighborhood of RT #2 [157149, 162377] CwlA SH3_3 SLH SLH SLH RVT-GII Intron_maturas2 HNHc Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2638-2895 bp Feature: gene Location: 3400-3678 bp Feature: gene Location: 157149-157607 bp Feature: gene Location: 158414-159721 bp Feature: domain Description: CwlA Location: 158453-158945 bp Feature: domain Description: CwlA Location: 158453-158945 bp Feature: domain Description: SH3_3 Location: 159005-159131 bp Feature: domain Description: SH3_3 Location: 159005-159131 bp Feature: domain Description: SLH Location: 159203-159320 bp Feature: domain Description: SLH Location: 159203-159320 bp Feature: domain Description: SLH Location: 159365-159494 bp Feature: domain Description: SLH Location: 159365-159494 bp Feature: domain Description: SLH Location: 159557-159683 bp Feature: domain Description: SLH Location: 159557-159683 bp Feature: gene Location: 160437-162377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 160767-161604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 160767-161604 bp Feature: domain Description: Intron_maturas2 Location: 161742-162033 bp Feature: domain Description: Intron_maturas2 Location: 161742-162033 bp Feature: domain Description: HNHc Note: nucleases Location: 162165-162324 bp Feature: domain Description: HNHc Note: nucleases Location: 162165-162324 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), CwlA (COG5632), SH3_3 (pfam08239), SLH (pfam00395)

Seq: NFEQ01000207.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000207, whole genome shotgun sequence (12107 bp)
Overview 1 RT 1: 6415-11938 bp Neighborhood of RT #1 [6415, 11991] CetZ_tubulin-like CetZ_tubulin-like RVT-GII Intron_maturas2 HNHc Feature: gene Location: 6415-7869 bp Feature: domain Description: CetZ_tubulin-like Location: 6454-6832 bp Feature: domain Description: CetZ_tubulin-like Location: 6454-6832 bp Feature: domain Description: CetZ_tubulin-like Location: 6964-7318 bp Feature: domain Description: CetZ_tubulin-like Location: 6964-7318 bp Feature: gene Location: 7874-8296 bp Feature: gene Location: 10051-11991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10381-11218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10381-11218 bp Feature: domain Description: Intron_maturas2 Location: 11356-11647 bp Feature: domain Description: Intron_maturas2 Location: 11356-11647 bp Feature: domain Description: HNHc Note: nucleases Location: 11779-11938 bp Feature: domain Description: HNHc Note: nucleases Location: 11779-11938 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), CetZ_tubulin-like (cd02202)

Seq: NFEQ01000086.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000086, whole genome shotgun sequence (31735 bp)
Overview 1 RT 1: 581-3554 bp Neighborhood of RT #1 [581, 3661] RVT-GII Intron_maturas2 HNHc T7_EssCb_Firm Replic_Relax Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2638-3099 bp Feature: domain Description: T7_EssCb_Firm Location: 2656-2956 bp Feature: domain Description: T7_EssCb_Firm Location: 2656-2956 bp Feature: gene Location: 3041-3661 bp Feature: domain Description: Replic_Relax Location: 3089-3554 bp Feature: domain Description: Replic_Relax Location: 3089-35 54 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T7_EssCb_Firm (TIGR03928), Replic_Relax (pfam13814), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEQ01000031.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000031, whole genome shotgun sequence (44129 bp)
Overview 1 RT 1: 39575-43960 bp Neighborhood of RT #1 [39575, 44013] AcrR MFS_MefA_like RVT-GII Intron_maturas2 HNHc Feature: gene Location: 39575-40210 bp Feature: domain Description: AcrR Location: 39599-40049 bp Feature: domain Description: AcrR Location: 39599-40049 bp Feature: gene Location: 40257-41504 bp Feature: domain Description: MFS_MefA_like Location: 40311-41484 bp Feature: domain Description: MFS_MefA_like Location: 40311-41484 bp Feature: gene Location: 42073-44013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42403-43240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42403-43240 bp Feature: domain Description: Intron_maturas2 Location: 43378-43669 bp Feature: domain Description: Intron_maturas2 Location: 43378-436 69 bp Feature: domain Description: HNHc Note: nucleases Location: 43801-43960 bp Feature: domain Description: HNHc Note: nucleases Location: 43801-43960 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), MFS_MefA_like (cd06173), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEQ01000182.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000182, whole genome shotgun sequence (11109 bp)
Overview 1 RT 1: 697-10801 bp Neighborhood of RT #1 [697, 10875] RVT-GII Intron_maturas2 HNHc RVT-GII HNHc RVT-GII Intron_maturas2 HNHc RVT-GII GIIM HNHc Feature: gene Location: 697-2520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 967-1795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 967-1795 bp Feature: domain Description: Intron_maturas2 Location: 1867-2185 bp Feature: domain Description: Intron_maturas2 Location: 1867-2185 bp Feature: domain Description: HNHc Note: nucleases Location: 2338-2491 bp Feature: domain Description: HNHc Note: nucleases Location: 2338-2491 bp Feature: gene Location: 3487-5277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3784-4480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37 84-4480 bp Feature: domain Description: HNHc Note: nucleases Location: 5020-5152 bp Feature: domain Description: HNHc Note: nucleases Location: 5020-5152 bp Feature: gene Location: 5343-5612 bp Feature: gene Location: 6204-8021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6474-7296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6474-7296 bp Feature: domain Description: Intron_maturas2 Location: 7377-7671 bp Feature: domain Description: Intron_maturas2 Location: 737 7-7671 bp Feature: domain Description: HNHc Note: nucleases Location: 7818-7992 bp Feature: domain Description: HNHc Note: nucleases Location: 7818-7992 bp Feature: gene Location: 8122-8328 bp Feature: gene Location: 9001-10875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9301-10006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9301-10006 bp Feature: domain Description: GIIM Note: maturase Location: 10120-10288 bp Feature: domain Description: GIIM Note: maturase Location: 10120-10288 bp Feature: domain Description: HNHc Note: nucleases Location: 10636-10801 bp Feature: domain Description: HNHc Note: nucleases Location: 10636-10801 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Intron_maturas2 (pfam01348), GIIM (pfam08388)

Seq: NFEQ01000176.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000176, whole genome shotgun sequence (18545 bp)
Overview 1 RT 1: 5130-8738 bp 2 RT 2: 15787-18408 bp Neighborhood of RT #1 [5130, 8746] RVT-GII GIIM Doc doc_partner Neighborhood of RT #2 [15787, 18545] RVT-GII GIIM Feature: gene Location: 5130-5384 bp Feature: gene Location: 5486-6070 bp Feature: gene Location: 6668-7942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6869-7484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6869-7484 bp Feature: domain Description: GIIM Note: maturase Location: 7544-7751 bp Feature: domain Description: GIIM Note: maturase Location: 7544-7751 bp Feature: gene Location: 8023-8424 bp Feature: domain Description: Doc Location: 8038-8410 bp Feature: domain Description: Doc Location: 8038 -8410 bp Feature: gene Location: 8462-8746 bp Feature: domain Description: doc_partner Location: 8507-8738 bp Feature: domain Description: doc_partner Location: 8507-8738 bp Feature: gene Location: 15787-16041 bp Feature: gene Location: 16143-16727 bp Feature: gene Location: 17325-18545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17526-18141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17526-18141 bp Feature: domain Description: GIIM Note: maturase Location: 18201-18408 bp Feature: domain Description: GIIM Note: maturase Location: 18201-18408 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Doc (COG3654), doc_partner (TIGR02609)

Seq: NFEQ01000146.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000146, whole genome shotgun sequence (14216 bp)
Overview 1 RT 1: 9892-14047 bp Neighborhood of RT #1 [9892, 14100] thiol_BshB2 PRK06172 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 9892-10554 bp Feature: domain Description: thiol_BshB2 Location: 9901-10549 bp Feature: domain Description: thiol_BshB2 Location: 9901-10549 bp Feature: gene Location: 10667-11410 bp Feature: domain Description: PRK06172 Location: 10670-11405 bp Feature: domain Description: PRK06172 Location: 10670-11405 bp Feature: gene Location: 12160-14100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12490-13327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12490-13327 bp Feature: domain Description: Intron_maturas2 Location: 13465-13756 bp Feature: domain Description: Intron_maturas2 Location: 13465-13756 bp Feature: domain Description: HNHc Note: nucleases Location: 13888-14047 bp Feature: domain Description: HNHc Note: nucleases Location: 13888-14047 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06172 (SDR family oxidoreductase), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), thiol_BshB2 (TIGR04000)

Seq: NFEQ01000203.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000203, whole genome shotgun sequence (4370 bp)
Overview 1 RT 1: 1-3737 bp Neighborhood of RT #1 [1, 3790] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1-1733 bp Feature: gene Location: 1850-3790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2180-3017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2180-3017 bp Feature: domain Description: Intron_maturas2 Location: 3155-3446 bp Feature: domain Description: Intron_maturas2 Location: 3155-3446 bp Feature: domain Description: HNHc Note: nucleases Location: 3578-3737 bp Feature: domain Description: HNHc Note: nucleases Location: 3578-3737 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEQ01000225.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000225, whole genome shotgun sequence (41912 bp)
Overview 1 RT 1: 24770-29423 bp Neighborhood of RT #1 [24770, 29423] PRK03113 RVT-GII HNHc Feature: gene Location: 24770-25207 bp Feature: domain Description: PRK03113 Location: 24788-25160 bp Feature: domain Description: PRK03113 Location: 24788-25160 bp Feature: gene Location: 25241-25996 bp Feature: gene Location: 26218-28125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26518-27229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26518-27229 bp Feature: domain Description: HNHc Note: nucleases Location: 27820-27970 bp Feature: domain Description: HNHc Note: nucleases Location: 27820-27970 bp Feature: gene Location: 28911-29147 bp Feature: gene Location: 29223-29423 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK03113 (putative disulfide oxidoreductase; Provisional), RVT-GII, HNHc (smart00507)

Seq: NFEQ01000066.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000066, whole genome shotgun sequence (9948 bp)
Overview 1 RT 1: 4717-9779 bp Neighborhood of RT #1 [4717, 9832] HTH_XRE RVT-GII Intron_maturas2 HNHc Feature: gene Location: 4717-5862 bp Feature: gene Location: 6301-6645 bp Feature: domain Description: HTH_XRE Location: 6316-6487 bp Feature: domain Description: HTH_XRE Location: 6316-6487 bp Feature: gene Location: 7892-9832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8222-9059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8222-9059 bp Feature: domain Description: Intron_maturas2 Location: 9197-9488 bp Feature: domain Description: Intron_maturas2 Location: 9197-9488 bp Feature: domain Description: HNHc Note: nucleases Location: 9620-9779 bp Feature: domain Description: HNHc Note: nucleases Location: 9620-9779 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEQ01000070.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000070, whole genome shotgun sequence (26515 bp)
Overview 1 RT 1: 23134-26346 bp Neighborhood of RT #1 [23134, 26399] PadR RVT-GII Intron_maturas2 HNHc Feature: gene Location: 23134-23379 bp Feature: gene Location: 23534-23848 bp Feature: domain Description: PadR Location: 23582-23792 bp Feature: domain Description: PadR Location: 23582-23792 bp Feature: gene Location: 24459-26399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24789-25626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24789-25626 bp Feature: domain Description: Intron_maturas2 Location: 25764-26055 bp Feature: domain Description: Intron_maturas2 Location: 25764-26055 bp Feature: domain Description: HNHc Note: nucleases Location: 26187-26346 bp Feature: domain Description: HNHc Note: nucleases Location: 26187-26346 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PadR (pfam03551), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEQ01000080.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000080, whole genome shotgun sequence (18631 bp)
Overview 1 RT 1: 117-3222 bp 2 RT 2: 13038-17903 bp Neighborhood of RT #1 [117, 3222] RVT-GII Intron_maturas2 HNHc E1_enzyme_family Neighborhood of RT #2 [13038, 17977] TraG-D_C Ftsk_gamma RVT-GII GIIM HNHc Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44 7-1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: gene Location: 2626-2808 bp Feature: domain Description: E1_enzyme_family Location: 2674-2791 bp Feature: domain Description: E1_enzyme_family Location: 2674-2791 bp Feature: gene Location: 2821-3222 bp Feature: gene Location: 13038-13808 bp Feature: gene Location: 14080-15951 bp Feature: domain Description: TraG-D_C Location: 14173-14488 bp Feature: domain Description: TraG-D_C Location: 14173-144 88 bp Feature: domain Description: Ftsk_gamma Location: 14896-15076 bp Feature: domain Description: Ftsk_gamma Location: 14896-15076 bp Feature: gene Location: 16103-17977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16403-17108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16403-17108 bp Feature: domain Description: GIIM Note: maturase Location: 17222-17390 bp Feature: domain Description: GIIM Note: maturase Location: 17222-17390 bp Feature: domain Description: HNHc Note: nucleases Location: 17738-17903 bp Feature: domain Description: HNHc Note: nucleases Location: 17738-17903 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), E1_enzyme_family (cl22428), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), GIIM (pfam08388)

Seq: NFEQ01000091.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000091, whole genome shotgun sequence (163416 bp)
Overview 1 RT 1: 581-5119 bp 2 RT 2: 159679-163247 bp Neighborhood of RT #1 [581, 5148] RVT-GII Intron_maturas2 HNHc Arm-DNA-bind_4 Phage_int_SAM_3 INT_ICEBs1_C_like PRK13670 Neighborhood of RT #2 [159679, 163300] DUF3886 MPP_YhcR_N RVT-GII Intron_maturas2 HNHc Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2642-3772 bp Feature: domain Description: Arm-DNA-bind_4 Location: 2672-2804 bp Feature: domain Description: Arm-DNA-bind_4 Location: 2672-2804 bp Feature: domain Description: Phage_int_SAM_3 Location: 2831-2999 bp Feature: domain Description: Phage_int_SAM_3 Location: 2831-2999 bp Feature: domain Description: INT_ICEBs1_C_like Location: 3158-3665 bp Feature: domain Description: INT_ICEBs1_C_like Location: 3158-3665 bp Feature: gene Location: 3922-5148 bp Feature: domain Description: PRK13670 Location: 3925-5119 bp Feature: domain Description: PRK13670 Location: 3925-5119 bp Feature: gene Location: 159679-159942 bp Feature: domain Description: DUF3886 Location: 159736-159934 bp Feature: domain Description: DUF3886 Location: 159736-159934 bp Feature: gene Location: 160144-160779 bp Feature: domain Description: MPP_YhcR_N Location: 160258-160780 bp Feature: domain Description: MPP_YhcR_N Location: 160258-160780 bp Feature: gene Location: 161360-163300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 161690-162527 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 161690-162527 bp Feature: domain Description: Intron_maturas2 Location: 162665-162956 bp Feature: domain Description: Intron_maturas2 Location: 162665-162956 bp Feature: domain Description: HNHc Note: nucleases Location: 163088-163247 bp Feature: domain Description: HNHc Note: nucleases Location: 163088-163247 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_4 (pfam14657), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), PRK13670 (nucleotidyltransferase), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF3886 (pfam13025), MPP_YhcR_N (cd07412)

Seq: NFEQ01000014.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000014, whole genome shotgun sequence (18911 bp)
Overview 1 RT 1: 15472-18278 bp Neighborhood of RT #1 [15472, 18331] DUF4865 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 15472-16020 bp Feature: domain Description: DUF4865 Location: 15475-16015 bp Feature: domain Description: DUF4865 Location: 15475-16015 bp Feature: gene Location: 16063-16275 bp Feature: gene Location: 16391-18331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16721-17558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16721-17558 bp Feature: domain Description: Intron_maturas2 Location: 17696-17987 bp Feature: domain Description: Intron_maturas2 Location: 17696-17987 bp Feature: domain Description: HNHc Note: nucleases Location: 18119-18278 bp Feature: domain Description: HNHc Note: nucleases Location: 18119-18278 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4865 (pfam16157), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEQ01000085.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000085, whole genome shotgun sequence (3039 bp)
Overview 1 RT 1: 581-3039 bp Neighborhood of RT #1 [581, 3039] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2641-3039 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEQ01000210.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000210, whole genome shotgun sequence (29361 bp)
Overview 1 RT 1: 25642-28728 bp Neighborhood of RT #1 [25642, 28781] ThiF RVT-GII Intron_maturas2 HNHc Feature: gene Location: 25642-25959 bp Feature: gene Location: 26104-26724 bp Feature: domain Description: ThiF Location: 26107-26650 bp Feature: domain Description: ThiF Location: 26107-26650 bp Feature: gene Location: 26841-28781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27171-28008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27171-28008 bp Feature: domain Description: Intron_maturas2 Location: 28146-28437 bp Feature: domain Description: Intron_maturas2 Location: 28146-28437 bp Feature: domain Description: HNHc Note: nucleases Location: 28569-28728 bp Feature: domain Description: HNHc Note: nucleases Location: 28569-28728 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ThiF (pfam00899), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEQ01000233.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000233, whole genome shotgun sequence (91624 bp)
Overview 1 RT 1: 581-4212 bp Neighborhood of RT #1 [581, 4586] RVT-GII Intron_maturas2 HNHc DUF2812 zf-HC2 DUF4179 Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2681-3232 bp Feature: domain Description: DUF2812 Location: 2684-2978 bp Feature: domain Description: DUF2812 Location: 2684-2978 bp Feature: gene Location: 3609-4586 bp Feature: domain Description: zf-HC2 Location: 3642-3717 bp Feature: domain Description: zf-HC2 Location: 3642-3717 bp Feature: domain Description: DUF4179 Location: 3921-4212 bp Feature: domain Description: DUF4179 Location: 3921-4212 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2812 (pfam11193), zf-HC2 (pfam13490), DUF4179 (pfam13786), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEQ01000208.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000208, whole genome shotgun sequence (18130 bp)
Overview 1 RT 1: 11294-17899 bp Neighborhood of RT #1 [11294, 18024] RVT-GII Intron_maturas2 HNHc RVT-GII HNHc Feature: gene Location: 11294-11680 bp Feature: gene Location: 11698-12843 bp Feature: gene Location: 13444-15267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13714-14542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13714-14542 bp Feature: domain Description: Intron_maturas2 Location: 14614-14932 bp Feature: domain Description: Intron_maturas2 Location: 14614-14932 bp Feature: domain Description: HNHc Note: nucleases Location: 15085-15238 bp Feature: domain Description: HNHc Note: nucleases Location: 150 85-15238 bp Feature: gene Location: 16234-18024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16531-17227 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16531-17227 bp Feature: domain Description: HNHc Note: nucleases Location: 17767-17899 bp Feature: domain Description: HNHc Note: nucleases Location: 17767-17899 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEQ01000083.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000083, whole genome shotgun sequence (38161 bp)
Overview 1 RT 1: 581-5875 bp Neighborhood of RT #1 [581, 5889] RVT-GII Intron_maturas2 HNHc pPIWI_RE_X MID_pPIWI_RE RNaseH_pPIWI_RE DUF3959 Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2632-4914 bp Feature: domain Description: pPIWI_RE_X Location: 2659-3583 bp Feature: domain Description: pPIWI_RE_X Location: 2659-3583 bp Feature: domain Description: MID_pPIWI_RE Location: 3781-4093 bp Feature: domain Description: MID_pPIWI_RE Location: 3781-4093 bp Feature: domain Description: RNaseH_pPIWI_RE Location: 4159-4822 bp Feature: domain Description: RNaseH_pPIWI_RE Location: 4159-4822 bp Feature: gene Location: 5122-5889 bp Feature: domain Description: DUF3959 Location: 5149-5875 bp Feature: domain Description: DUF3959 Location: 51 49-5875 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pPIWI_RE_X, MID_pPIWI_RE (pfam18157), RNaseH_pPIWI_RE, DUF3959 (pfam13105), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEQ01000248.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000248, whole genome shotgun sequence (16707 bp)
Overview 1 RT 1: 117-5144 bp Neighborhood of RT #1 [117, 5176] RVT-GII Intron_maturas2 HNHc Tar CPBP Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: gene Location: 2638-3720 bp Feature: domain Description: Tar Location: 3010-3721 bp Feature: domain Description: Tar Location: 3010-3721 bp Feature: gene Location: 4691-5176 bp Feature: domain Description: CPBP Location: 4838-5144 bp Feature: domain Description: CPBP Location: 4838-5144 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Tar (COG0840), CPBP

Seq: NFEQ01000140.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000140, whole genome shotgun sequence (9432 bp)
Overview 1 RT 1: 3988-8704 bp Neighborhood of RT #1 [3988, 8778] rpsA TraG-D_C Ftsk_gamma RVT-GII GIIM HNHc Feature: gene Location: 3988-4971 bp Feature: domain Description: rpsA Location: 4255-4792 bp Feature: domain Description: rpsA Location: 4255-4792 bp Feature: gene Location: 5229-6671 bp Feature: domain Description: TraG-D_C Location: 5241-5559 bp Feature: domain Description: TraG-D_C Location: 5241-5559 bp Feature: domain Description: Ftsk_gamma Location: 5994-6153 bp Feature: domain Description: Ftsk_gamma Location: 5994-6153 bp Feature: gene Location: 6904-8778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7204-7909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7204-7909 bp Feature: domain Description: GIIM Note: maturase Location: 8023-8191 bp Feature: domain Description: GIIM Note: maturase Location: 8023-8191 bp Feature: domain Description: HNHc Note: nucleases Location: 8539-8704 bp Feature: domain Description: HNHc Note: nucleases Location: 853 9-8704 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpsA (TIGR00717), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NFEQ01000256.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000256, whole genome shotgun sequence (4732 bp)
Overview 1 RT 1: 117-3908 bp Neighborhood of RT #1 [117, 4702] RVT-GII Intron_maturas2 HNHc SLH SLH SLH Feature: gene Location: 117-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 447-1284 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: Intron_maturas2 Location: 1422-1713 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: domain Description: HNHc Note: nucleases Location: 1845-2004 bp Feature: gene Location: 2638-3186 bp Feature: gene Location: 3311-4702 bp Feature: domain Description: SLH Location: 3422-3551 bp Feature: domain Description: SLH Location: 3422-3551 bp Feature: domain Description: SLH Location: 3608-3734 bp Feature: domain Description: SLH Location: 3608-3734 bp Feature: domain Description: SLH Location: 3782-3908 bp Feature: domain Description: SLH Location: 3782-3908 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), SLH (pfam00395)

Seq: NFEQ01000018.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000018, whole genome shotgun sequence (7692 bp)
Overview 1 RT 1: 1839-7523 bp Neighborhood of RT #1 [1839, 7576] delta_endotoxin_C Endotoxin_C2 Cry1Ac_D5 Endotoxin_C2 delta_endotoxin_C RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1839-2045 bp Feature: gene Location: 2306-5065 bp Feature: domain Description: delta_endotoxin_C Location: 2522-3566 bp Feature: domain Description: delta_endotoxin_C Location: 2522-3566 bp Feature: domain Description: Endotoxin_C2 Location: 3590-3770 bp Feature: domain Description: Endotoxin_C2 Location: 3590-3770 bp Feature: domain Description: Cry1Ac_D5 Location: 3791-4334 bp Feature: domain Description: Cry1Ac_D5 Location: 3791-4334 bp Feature: domain Description: Endotoxin_C2 Location: 4433-4562 bp Feature: domain Description: Endotoxin_C2 Location: 4433-4562 bp Feature: domain Description: delta_endotoxin_C Location: 4946-5051 bp Feature: domain Description: delta_endotoxin_C Location: 4946-5051 bp Feature: gene Location: 5636-7576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5966-6803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5966-6803 bp Feature: domain Description: Intron_maturas2 Location: 6941-7232 bp Feature: domain Description: Intron_maturas2 Location: 6941-7232 bp Feature: domain Description: HNHc Note: nucleases Location: 7364-7523 bp Feature: domain Description: HNHc Note: nucleases Location: 7364-7523 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT delta_endotoxin_C (cd04085), Endotoxin_C2 (pfam18449), Cry1Ac_D5 (pfam17997), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NFEQ01000212.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000212, whole genome shotgun sequence (6294 bp)
Overview 1 RT 1: 1-5996 bp Neighborhood of RT #1 [1, 5996] CwlT_like RVT-GII HNHc Feature: gene Location: 1-591 bp Feature: gene Location: 588-1583 bp Feature: domain Description: CwlT_like Location: 1437-1560 bp Feature: domain Description: CwlT_like Location: 1437-156 0 bp Feature: gene Location: 2257-4062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2551-3247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2551-3247 bp Feature: domain Description: HNHc Note: nucleases Location: 3808-3946 bp Feature: domain Description: HNHc Note: nucleases Location: 3808-3946 bp Feature: gene Location: 4113-5404 bp Feature: gene Location: 5421-5996 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), CwlT_like

Seq: NFEQ01000211.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000211, whole genome shotgun sequence (5793 bp)
Overview 1 RT 1: 106-5793 bp Neighborhood of RT #1 [106, 5793] RVT-GII HNHc CwlT_like Feature: gene Location: 106-1911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 400-1096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 400-1096 bp Feature: domain Description: HNHc Note: nucleases Location: 1657-1795 bp Feature: domain Description: HNHc Note: nucleases Location: 1657 -1795 bp Feature: gene Location: 2585-3580 bp Feature: domain Description: CwlT_like Location: 3434-3557 bp Feature: domain Description: CwlT_like Location: 3434-3557 bp Feature: gene Location: 3577-5793 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), CwlT_like

Seq: NFEQ01000081.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000081, whole genome shotgun sequence (100711 bp)
Overview 1 RT 1: 581-4344 bp 2 RT 2: 95881-100078 bp Neighborhood of RT #1 [581, 4637] RVT-GII Intron_maturas2 HNHc DUF4879 HTH_MerR-like_sg1 UbiE Neighborhood of RT #2 [95881, 100131] AcoR RVT-GII Intron_maturas2 HNHc Feature: gene Location: 581-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 911-1748 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: Intron_maturas2 Location: 1886-2177 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: domain Description: HNHc Note: nucleases Location: 2309-2468 bp Feature: gene Location: 2638-2907 bp Feature: domain Description: DUF4879 Location: 2653-2902 bp Feature: domain Description: DUF4879 Location: 2653-2902 bp Feature: gene Location: 3414-4637 bp Feature: domain Description: HTH_MerR-like_sg1 Location: 3417-3729 bp Feature: domain Description: HTH_MerR-like_sg1 Location: 3417-3729 bp Feature: domain Description: UbiE Location: 4074-4344 bp Feature: domain Description: UbiE Location: 4074-4344 bp Feature: gene Location: 95881-97731 bp Feature: domain Description: AcoR Location: 95905-97729 bp Feature: domain Description: AcoR Location: 95905-97729 bp Feature: gene Location: 97854-97967 bp Feature: gene Location: 98191-100131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98521-99358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98521-99358 bp Feature: domain Description: Intron_maturas2 Location: 99496-99787 bp Feature: domain Description: Intron_maturas2 Location: 99496-99787 bp Feature: domain Description: HNHc Note: nucleases Location: 99919-100078 bp Feature: domain Description: HNHc Note: nucleases Location: 99919-100078 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4879 (pfam16219), HTH_MerR-like_sg1 (cd04777), UbiE (COG2226), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), AcoR (COG3284)

Seq: NFEQ01000094.1 Bacillus thuringiensis serovar aizawai strain T07030 T07030_contig000094, whole genome shotgun sequence (3625 bp)
Overview 1 RT 1: 92-3217 bp Neighborhood of RT #1 [92, 3498] DDE_Tnp_1 RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 92-1141 bp Feature: domain Description: DDE_Tnp_1 Location: 449-1136 bp Feature: domain Description: DDE_Tnp_1 Location: 449-1136 bp Feature: gene Location: 1302-1481 bp Feature: gene Location: 1655-2962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1940-2579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1940-2579 bp Feature: domain Description: GIIM Note: maturase Location: 2654-2879 bp Feature: domain Description: GIIM Note: maturase Location: 2654-2879 bp Feature: gene Location: 3106-3498 bp Feature: domain Description: DDE_Tnp_1 Location: 3115-3217 bp Feature: domain Description: DDE_Tnp_1 Location: 3115-3217 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609)