myRT

myRT report for GCA_002147905.1_ASM214790v1

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Seq: MOOL01000084.1 Bacillus thuringiensis serovar xiaguangiensis strain BGSC 4BN1 contig000084, whole genome shotgun sequence (32048 bp)
Overview 1 RT 1: 18580-24047 bp Neighborhood of RT #1 [18580, 24064] CwlT_like NlpD Spr RVT-GII HNHc CwlT_like Feature: gene Location: 18580-19155 bp Feature: gene Location: 19172-20248 bp Feature: domain Description: CwlT_like Location: 19175-19361 bp Feature: domain Description: CwlT_like Location: 1 91 75-1 9361 bp Feature: domain Description: NlpD Location: 19382-19820 bp Feature: domain Description: NlpD Location: 1 9382-1 9820 bp Feature: domain Description: Spr Location: 19853-20189 bp Feature: domain Description: Spr Location: 1 9853-201 89 bp Feature: gene Location: 20341-22137 bp Ori: OUB12229.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20599-21304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20599-21 304 bp Feature: domain Description: HNHc Note: nucleases Location: 21865-22000 bp Feature: domain Description: HNHc Note: nucleases Location: 21 865-22000 bp Feature: gene Location: 22449-22667 bp Feature: gene Location: 22910-24064 bp Ori: OUB12231.1 Feature: domain Description: CwlT_like Location: 23762-24047 bp Feature: domain Description: CwlT_like Location: 23762-24047 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CwlT_like, NlpD (COG0739), Spr (COG0791), RVT-GII, HNHc (smart00507)

Seq: MOOL01000079.1 Bacillus thuringiensis serovar xiaguangiensis strain BGSC 4BN1 contig000079, whole genome shotgun sequence (125441 bp)
Overview 1 RT 1: 622-5473 bp 2 RT 2: 118932-123730 bp Neighborhood of RT #1 [622, 5473] RVT-GII Intron_maturas2 HNHc TraG-D_C Ftsk_gamma Neighborhood of RT #2 [118932, 123729] Replic_Relax Replic_Relax DDE_Tnp_1 RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 622-2439 bp Ori: OUB13624.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 892-1717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 892 -1717 bp Feature: domain Description: Intron_maturas2 Location: 1798-2089 bp Feature: domain Description: Intron_maturas2 Location: 1798-2 089 bp Feature: domain Description: HNHc Note: nucleases Location: 2236-2413 bp Feature: domain Description: HNHc Note: nucleases Location: 2 2 36-2 413 bp Feature: gene Location: 2540-4396 bp Feature: domain Description: TraG-D_C Location: 2684-3041 bp Feature: domain Description: TraG-D_C Location: 2 684-3041 bp Feature: domain Description: Ftsk_gamma Location: 3449-3629 bp Feature: domain Description: Ftsk_gamma Location: 3449-362 9 bp Feature: gene Location: 4703-5473 bp Feature: gene Location: 118932-119519 bp Ori: OUB13721.1 Feature: domain Description: Replic_Relax Location: 118962-119088 bp Feature: domain Description: Replic_Relax Location: 118962 -119088 bp Feature: domain Description: Replic_Relax Location: 119145-119394 bp Feature: domain Description: Replic_Relax Location: 119145-119394 bp Feature: gene Location: 120318-120731 bp Ori: OUB13722.1 Feature: domain Description: DDE_Tnp_1 Location: 120354-120456 bp Feature: domain Description: DDE_Tnp_1 Location: 12 0354-12 0456 bp Feature: gene Location: 120848-122155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121133-121769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 1133-12 1769 bp Feature: domain Description: GIIM Note: maturase Location: 121847-122072 bp Feature: domain Description: GIIM Note: maturase Location: 12 1847-12 2 072 bp Feature: gene Location: 122331-122510 bp Feature: gene Location: 122677-123729 bp Feature: domain Description: DDE_Tnp_1 Location: 123043-123730 bp Feature: domain Description: DDE_Tnp_1 Location: 12 3043-12 3730 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), Replic_Relax (pfam13814), DDE_Tnp_1 (pfam01609), GIIM (pfam08388)

Seq: MOOL01000055.1 Bacillus thuringiensis serovar xiaguangiensis strain BGSC 4BN1 contig000055, whole genome shotgun sequence (25448 bp)
Overview 1 RT 1: 21027-25319 bp Neighborhood of RT #1 [21027, 25345] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 21027-21413 bp Feature: gene Location: 21431-22909 bp Feature: gene Location: 23528-25345 bp Ori: OUB15103.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23798-24623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 798-24623 bp Feature: domain Description: Intron_maturas2 Location: 24704-24995 bp Feature: domain Description: Intron_maturas2 Location: 24704-24995 bp Feature: domain Description: HNHc Note: nucleases Location: 25142-25319 bp Feature: domain Description: HNHc Note: nucleases Location: 25142-253 19 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: MOOL01000044.1 Bacillus thuringiensis serovar xiaguangiensis strain BGSC 4BN1 contig000044, whole genome shotgun sequence (40397 bp)
Overview 1 RT 1: 13144-17769 bp 2 RT 2: 34684-39750 bp Neighborhood of RT #1 [13144, 18227] RVT-GII Bacillus_HBL Neighborhood of RT #2 [34684, 39776] rpsA TraG-D_C Ftsk_gamma Ftsk_gamma RVT-GII Intron_maturas2 HNHc Feature: gene Location: 13144-13644 bp Feature: gene Location: 13752-14297 bp Feature: gene Location: 14288-15565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14609-15344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 609-1534 4 bp Feature: gene Location: 15562-15762 bp Feature: gene Location: 17094-18227 bp Ori: OUB17045.1 Feature: domain Description: Bacillus_HBL Location: 17238-17769 bp Feature: domain Description: Bacillus_HBL Location: 17238-17769 bp Feature: gene Location: 34684-35667 bp Ori: OUB17055.1 Feature: domain Description: rpsA Location: 34951-35488 bp Feature: domain Description: rpsA Location: 34 951-354 88 bp Feature: gene Location: 35903-37858 bp Feature: domain Description: TraG-D_C Location: 36047-36407 bp Feature: domain Description: TraG-D_C Location: 3604 7-364 07 bp Feature: domain Description: Ftsk_gamma Location: 36842-37013 bp Feature: domain Description: Ftsk_gamma Location: 3684 2-37013 bp Feature: domain Description: Ftsk_gamma Location: 37181-37319 bp Feature: domain Description: Ftsk_gamma Location: 37181-37319 bp Feature: gene Location: 37959-39776 bp Ori: OUB17056.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38229-39054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38229-39054 bp Feature: domain Description: Intron_maturas2 Location: 39135-39426 bp Feature: domain Description: Intron_maturas2 Location: 39135-394 26 bp Feature: domain Description: HNHc Note: nucleases Location: 39573-39750 bp Feature: domain Description: HNHc Note: nucleases Location: 39573-39750 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Bacillus_HBL (pfam05791), rpsA (TIGR00717), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: MOOL01000063.1 Bacillus thuringiensis serovar xiaguangiensis strain BGSC 4BN1 contig000063, whole genome shotgun sequence (226796 bp)
Overview 1 RT 1: 36172-43123 bp Neighborhood of RT #1 [36172, 44217] RVT-UG28 HTH_XRE Feature: gene Location: 36172-36369 bp Feature: gene Location: 37325-39436 bp Feature: gene Location: 39965-41464 bp Ori: OUB14628.1 Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 40253-40889 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 4025 3-40889 bp Feature: gene Location: 41799-42220 bp Feature: gene Location: 42958-44217 bp Ori: OUB14629.1 Feature: domain Description: HTH_XRE Location: 42988-43123 bp Feature: domain Description: HTH_XRE Location: 42988-43123 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG28, HTH_XRE (smart00530)

Seq: MOOL01000056.1 Bacillus thuringiensis serovar xiaguangiensis strain BGSC 4BN1 contig000056, whole genome shotgun sequence (26772 bp)
Overview 1 RT 1: 22354-26643 bp Neighborhood of RT #1 [22354, 26669] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 22354-22737 bp Feature: gene Location: 22755-24233 bp Feature: gene Location: 24852-26669 bp Ori: OUB14980.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25122-25947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25122-25947 bp Feature: domain Description: Intron_maturas2 Location: 26028-26319 bp Feature: domain Description: Intron_maturas2 Location: 26 028-26 319 bp Feature: domain Description: HNHc Note: nucleases Location: 26466-26643 bp Feature: domain Description: HNHc Note: nucleases Location: 26 46 6 -26 6 43 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)