myRT

myRT report for GCA_002147955.1_ASM214795v1

Download annotations/find similar RTs

Seq: MOON01000070.1 Bacillus thuringiensis serovar pirenaica strain BGSC 4BU1 contig000070, whole genome shotgun sequence (28760 bp)
Overview 1 RT 1: 20391-28104 bp Neighborhood of RT #1 [20391, 28133] TraG-D_C Ftsk_gamma RVT-GII GIIM RVT-GII Intron_maturas2 HNHc Feature: gene Location: 20391-21212 bp Feature: gene Location: 21543-23228 bp Feature: domain Description: TraG-D_C Location: 21555-21873 bp Feature: domain Description: TraG-D_C Location: 21 555-21 873 bp Feature: domain Description: Ftsk_gamma Location: 22281-22461 bp Feature: domain Description: Ftsk_gamma Location: 22281 -22461 bp Feature: gene Location: 23461-25335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23761-24466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23761 -24466 bp Feature: domain Description: GIIM Note: maturase Location: 24559-24748 bp Feature: domain Description: GIIM Note: maturase Location: 24559-24748 bp Feature: gene Location: 26316-28133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26586-27408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26586-27408 bp Feature: domain Description: Intron_maturas2 Location: 27489-27783 bp Feature: domain Description: Intron_maturas2 Location: 27489-27783 bp Feature: domain Description: HNHc Note: nucleases Location: 27930-28104 bp Feature: domain Description: HNHc Note: nucleases Location: 27930-281 04 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), Ftsk_gamma (smart00843), RVT-GII, GIIM (pfam08388), Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: MOON01000067.1 Bacillus thuringiensis serovar pirenaica strain BGSC 4BU1 contig000067, whole genome shotgun sequence (42600 bp)
Overview 1 RT 1: 29203-36080 bp Neighborhood of RT #1 [29203, 36080] SF2_C_SNF RVT-GII Intron_maturas2 HNHc DEXDc Feature: gene Location: 29203-29916 bp Feature: gene Location: 29933-31549 bp Feature: domain Description: SF2_C_SNF Location: 30698-30941 bp Feature: domain Description: SF2 _C_SNF Location: 30698-30941 bp Feature: gene Location: 31589-33424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31856-32687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31856-32 687 bp Feature: domain Description: Intron_maturas2 Location: 32756-33131 bp Feature: domain Description: Intron_maturas2 Location: 32 756-33131 bp Feature: domain Description: HNHc Note: nucleases Location: 33224-33371 bp Feature: domain Description: HNHc Note: nucleases Location: 332 2 4-33371 bp Feature: gene Location: 34027-35781 bp Feature: domain Description: DEXDc Location: 34804-35758 bp Feature: domain Description: DEXDc Location: 34804-35758 bp Feature: gene Location: 35853-36080 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SF2_C_SNF (cd18793), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DEXDc (smart00487)

Seq: MOON01000011.1 Bacillus thuringiensis serovar pirenaica strain BGSC 4BU1 contig000011, whole genome shotgun sequence (16454 bp)
Overview 1 RT 1: 2361-9396 bp Neighborhood of RT #1 [2361, 9452] T_den_put_tspse DUF3854 RVT-GII GIIM LPD1 Feature: gene Location: 2361-3284 bp Feature: domain Description: T_den_put_tspse Location: 2403-3267 bp Feature: domain Description: T_den_put_tspse Location: 2403 -3 267 bp Feature: gene Location: 3612-3971 bp Feature: domain Description: DUF3854 Location: 3783-3942 bp Feature: domain Description: DUF3 854 Location: 3 783 -3 942 bp Feature: gene Location: 4082-5959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4409-5105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4409-5105 bp Feature: domain Description: GIIM Note: maturase Location: 5246-5375 bp Feature: domain Description: GIIM Note: maturase Location: 5246-53 75 bp Feature: gene Location: 6701-7687 bp Feature: gene Location: 7677-9452 bp Feature: domain Description: LPD1 Location: 9201-9396 bp Feature: domain Description: LPD1 Location: 9201-93 96 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T_den_put_tspse (TIGR01784), DUF3854 (pfam12965), RVT-GII, GIIM (pfam08388), LPD1 (pfam18796)

Seq: MOON01000024.1 Bacillus thuringiensis serovar pirenaica strain BGSC 4BU1 contig000024, whole genome shotgun sequence (264445 bp)
Overview 1 RT 1: 261131-263818 bp Neighborhood of RT #1 [261131, 263931] RVT-GII HNHc Feature: gene Location: 261131-261343 bp Feature: gene Location: 261487-261723 bp Feature: gene Location: 262135-263931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 262432-263125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2624 32-263125 bp Feature: domain Description: HNHc Note: nucleases Location: 263680-263818 bp Feature: domain Description: HNHc Note: nucleases Location: 263680-263818 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: MOON01000065.1 Bacillus thuringiensis serovar pirenaica strain BGSC 4BU1 contig000065, whole genome shotgun sequence (22944 bp)
Overview 1 RT 1: 238-7417 bp Neighborhood of RT #1 [238, 7417] RVT-GII GIIM RVT-GII Intron_maturas2 HNHc Feature: gene Location: 238-2112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 538-1243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 38-1243 bp Feature: domain Description: GIIM Note: maturase Location: 1336-1525 bp Feature: domain Description: GIIM Note: maturase Location: 1336-15 25 bp Feature: gene Location: 3093-4910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3363-4185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3363-4185 bp Feature: domain Description: Intron_maturas2 Location: 4266-4560 bp Feature: domain Description: Intron_maturas2 Location: 4266-45 60 bp Feature: domain Description: HNHc Note: nucleases Location: 4707-4881 bp Feature: domain Description: HNHc Note: nucleases Location: 4707-4881 bp Feature: gene Location: 5535-7013 bp Feature: gene Location: 7031-7417 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: MOON01000036.1 Bacillus thuringiensis serovar pirenaica strain BGSC 4BU1 contig000036, whole genome shotgun sequence (11224 bp)
Overview 1 RT 1: 3008-10568 bp Neighborhood of RT #1 [3008, 10597] rpsA TraG-D_C Ftsk_gamma RVT-GII GIIM RVT-GII Intron_maturas2 HNHc Feature: gene Location: 3008-3991 bp Feature: domain Description: rpsA Location: 3275-3812 bp Feature: domain Description: rpsA Location: 3275-3812 bp Feature: gene Location: 4250-5692 bp Feature: domain Description: TraG-D_C Location: 4262-4580 bp Feature: domain Description: TraG-D_C Location: 426 2-4580 bp Feature: domain Description: Ftsk_gamma Location: 5015-5147 bp Feature: domain Description: Ftsk_gamma Location: 5015-5147 bp Feature: gene Location: 5925-7799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6225-6930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 225-6 930 bp Feature: domain Description: GIIM Note: maturase Location: 7023-7212 bp Feature: domain Description: GIIM Note: maturase Location: 7023-7212 bp Feature: gene Location: 8780-10597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9050-9872 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9050-9872 bp Feature: domain Description: Intron_maturas2 Location: 9953-10247 bp Feature: domain Description: Intron_maturas2 Location: 9953-10247 bp Feature: domain Description: HNHc Note: nucleases Location: 10394-10568 bp Feature: domain Description: HNHc Note: nucleases Location: 10394-1056 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpsA (TIGR00717), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), RVT-GII, GIIM (pfam08388), Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: MOON01000030.1 Bacillus thuringiensis serovar pirenaica strain BGSC 4BU1 contig000030, whole genome shotgun sequence (61640 bp)
Overview 1 RT 1: 515-3014 bp Neighborhood of RT #1 [515, 3014] RVT-GII HNHc Feature: gene Location: 515-2311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 812-1505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 812-1505 bp Feature: domain Description: HNHc Note: nucleases Location: 2060-2198 bp Feature: domain Description: HNHc Note: nucleases Location: 2060-2198 bp Feature: gene Location: 2473-2682 bp Feature: gene Location: 2727-3014 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: MOON01000029.1 Bacillus thuringiensis serovar pirenaica strain BGSC 4BU1 contig000029, whole genome shotgun sequence (4553 bp)
Overview 1 RT 1: 515-3120 bp Neighborhood of RT #1 [515, 3120] RVT-GII HNHc Feature: gene Location: 515-2311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 812-1505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8 12-1505 bp Feature: domain Description: HNHc Note: nucleases Location: 2060-2198 bp Feature: domain Description: HNHc Note: nucleases Location: 2060-2198 bp Feature: gene Location: 2432-2872 bp Feature: gene Location: 2893-3120 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: MOON01000064.1 Bacillus thuringiensis serovar pirenaica strain BGSC 4BU1 contig000064, whole genome shotgun sequence (22847 bp)
Overview 1 RT 1: 238-7414 bp Neighborhood of RT #1 [238, 7414] RVT-GII GIIM RVT-GII Intron_maturas2 HNHc Feature: gene Location: 238-2112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 538-1243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 538-1243 bp Feature: domain Description: GIIM Note: maturase Location: 1336-1525 bp Feature: domain Description: GIIM Note: maturase Location: 1336-1525 bp Feature: gene Location: 3093-4910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3363-4185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3363-4185 bp Feature: domain Description: Intron_maturas2 Location: 4266-4560 bp Feature: domain Description: Intron_maturas2 Location: 4266-4560 bp Feature: domain Description: HNHc Note: nucleases Location: 4707-4881 bp Feature: domain Description: HNHc Note: nucleases Location: 4707-4881 bp Feature: gene Location: 5535-7013 bp Feature: gene Location: 7031-7414 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: MOON01000100.1 Bacillus thuringiensis serovar pirenaica strain BGSC 4BU1 contig000100, whole genome shotgun sequence (145147 bp)
Overview 1 RT 1: 98-3972 bp Neighborhood of RT #1 [98, 3972] RVT-GII HNHc FtsB Feature: gene Location: 98-1894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 395-1088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 395-10 88 bp Feature: domain Description: HNHc Note: nucleases Location: 1643-1781 bp Feature: domain Description: HNHc Note: nucleases Location: 1643-1781 bp Feature: gene Location: 2715-3074 bp Feature: domain Description: FtsB Location: 2748-3069 bp Feature: domain Description: FtsB Location: 2748-3069 bp Feature: gene Location: 3508-3972 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FtsB (COG2919), RVT-GII, HNHc (smart00507)

Seq: MOON01000083.1 Bacillus thuringiensis serovar pirenaica strain BGSC 4BU1 contig000083, whole genome shotgun sequence (140735 bp)
Overview 1 RT 1: 122225-129697 bp Neighborhood of RT #1 [122225, 129697] DUF3221 UbiH RVT-GII Sialidase_non-viral Feature: gene Location: 122225-122620 bp Feature: domain Description: DUF3221 Location: 122378-122606 bp Feature: domain Description: DUF3221 Location: 122378-122606 bp Feature: gene Location: 122677-124203 bp Feature: domain Description: UbiH Location: 122719-123802 bp Feature: domain Description: UbiH Location: 122719-123802 bp Feature: gene Location: 126164-126586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 126449-126587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 126449-126587 bp Feature: gene Location: 127251-128744 bp Feature: domain Description: Sialidase_non-viral Location: 127932-128340 bp Feature: domain Description: Sialidase_non-viral Location: 127932-128340 bp Feature: gene Location: 129239-129697 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3221 (pfam11518), UbiH (TIGR01984), RVT-GII, Sialidase_non-viral (cd15482)