myRT

myRT report for GCA_002147965.1_ASM214796v1

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Seq: MOOP01000143.1 Bacillus thuringiensis serovar iberica strain BGSC 4BW1 contig000143, whole genome shotgun sequence (7230 bp)
Overview 1 RT 1: 1-7023 bp Neighborhood of RT #1 [1, 7023] T4SS-DNA_transf T4SS-DNA_transf RVT-GII HNHc Feature: gene Location: 1-2593 bp Feature: gene Location: 2625-4514 bp Feature: domain Description: T4SS-DNA_transf Location: 2634-3117 bp Feature: domain Description: T4SS-DNA_transf Location: 2634-31 1 7 bp Feature: domain Description: T4SS-DNA_transf Location: 3507-4023 bp Feature: domain Description: T4SS-DNA_transf Location: 3507-4023 bp Feature: gene Location: 4715-6544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5015-5717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 501 5-571 7 bp Feature: domain Description: HNHc Note: nucleases Location: 6296-6428 bp Feature: domain Description: HNHc Note: nucleases Location: 6296-6428 bp Feature: gene Location: 6832-7023 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T4SS-DNA_transf (pfam02534), RVT-GII, HNHc (smart00507)

Seq: MOOP01000045.1 Bacillus thuringiensis serovar iberica strain BGSC 4BW1 contig000045, whole genome shotgun sequence (2635 bp)
Overview 1 RT 1: 120-2428 bp Neighborhood of RT #1 [120, 2428] RVT-GII HNHc Feature: gene Location: 120-1949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 420-1122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 0-112 2 bp Feature: domain Description: HNHc Note: nucleases Location: 1701-1833 bp Feature: domain Description: HNHc Note: nucleases Location: 1701-1833 bp Feature: gene Location: 2237-2428 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: MOOP01000043.1 Bacillus thuringiensis serovar iberica strain BGSC 4BW1 contig000043, whole genome shotgun sequence (4476 bp)
Overview 1 RT 1: 1344-4468 bp Neighborhood of RT #1 [1344, 4476] RVT-GII HNHc Feature: gene Location: 1344-2036 bp Feature: gene Location: 2276-2467 bp Feature: gene Location: 2755-4476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3055-3757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 055-3 757 bp Feature: domain Description: HNHc Note: nucleases Location: 4336-4468 bp Feature: domain Description: HNHc Note: nucleases Location: 43 3 6-4468 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: MOOP01000160.1 Bacillus thuringiensis serovar iberica strain BGSC 4BW1 contig000160, whole genome shotgun sequence (226062 bp)
Overview 1 RT 1: 74593-80440 bp Neighborhood of RT #1 [74593, 80440] RVT-Retrons HTH_3 Feature: gene Location: 74593-75291 bp Feature: gene Location: 75557-76735 bp Feature: gene Location: 76736-77668 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 76775-77351 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 76775-77351 bp Feature: gene Location: 78374-78823 bp Feature: domain Description: HTH_3 Location: 78422-78572 bp Feature: domain Description: HTH_3 Location: 784 22-78572 bp Feature: gene Location: 79364-80440 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HTH_3 (pfam01381)

Seq: MOOP01000099.1 Bacillus thuringiensis serovar iberica strain BGSC 4BW1 contig000099, whole genome shotgun sequence (10832 bp)
Overview 1 RT 1: 589-3586 bp Neighborhood of RT #1 [589, 3586] RVT-GII Intron_maturas2 HNHc NLPC_P60 Feature: gene Location: 589-2412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 853-1687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85 3-1687 bp Feature: domain Description: Intron_maturas2 Location: 1759-2095 bp Feature: domain Description: Intron_maturas2 Location: 175 9-2095 bp Feature: domain Description: HNHc Note: nucleases Location: 2233-2389 bp Feature: domain Description: HNHc Note: nucleases Location: 2233-2389 bp Feature: gene Location: 2524-2979 bp Feature: domain Description: NLPC_P60 Location: 2665-2971 bp Feature: domain Description: NLPC_P60 Location: 2665 -2971 bp Feature: gene Location: 2993-3586 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NLPC_P60 (pfam00877), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: MOOP01000103.1 Bacillus thuringiensis serovar iberica strain BGSC 4BW1 contig000103, whole genome shotgun sequence (11894 bp)
Overview 1 RT 1: 1-3023 bp Neighborhood of RT #1 [1, 3037] RVT-GII HNHc VirD4 Feature: gene Location: 1-1722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301-1003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301-1003 bp Feature: domain Description: HNHc Note: nucleases Location: 1582-1714 bp Feature: domain Description: HNHc Note: nucleases Location: 1582-1714 bp Feature: gene Location: 2010-2201 bp Feature: gene Location: 2441-3037 bp Feature: domain Description: VirD4 Location: 2525-3023 bp Feature: domain Description: VirD4 Location: 2525-3023 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), VirD4 (COG3505)

Seq: MOOP01000097.1 Bacillus thuringiensis serovar iberica strain BGSC 4BW1 contig000097, whole genome shotgun sequence (9590 bp)
Overview 1 RT 1: 115-5733 bp Neighborhood of RT #1 [115, 5733] RVT-GII Intron_maturas2 HNHc CwlT_like Feature: gene Location: 115-1938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 379-1213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37 9-1213 bp Feature: domain Description: Intron_maturas2 Location: 1285-1621 bp Feature: domain Description: Intron_maturas2 Location: 1285-1621 bp Feature: domain Description: HNHc Note: nucleases Location: 1759-1915 bp Feature: domain Description: HNHc Note: nucleases Location: 17 59-1915 bp Feature: gene Location: 2527-3222 bp Feature: domain Description: CwlT_like Location: 2803-3223 bp Feature: domain Description: CwlT_like Location: 2803-3223 bp Feature: gene Location: 3286-5733 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), CwlT_like

Seq: MOOP01000098.1 Bacillus thuringiensis serovar iberica strain BGSC 4BW1 contig000098, whole genome shotgun sequence (51756 bp)
Overview 1 RT 1: 115-4160 bp Neighborhood of RT #1 [115, 4183] RVT-GII Intron_maturas2 HNHc Lysozyme_like Ere-like Feature: gene Location: 115-1938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 379-1213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 379-1213 bp Feature: domain Description: Intron_maturas2 Location: 1285-1621 bp Feature: domain Description: Intron_maturas2 Location: 128 5-1621 bp Feature: domain Description: HNHc Note: nucleases Location: 1759-1915 bp Feature: domain Description: HNHc Note: nucleases Location: 1759-1915 bp Feature: gene Location: 2515-3096 bp Feature: domain Description: Lysozyme_like Location: 2650-3085 bp Feature: domain Description: Lysozyme_like Location: 2650-308 5 bp Feature: gene Location: 3593-4183 bp Feature: domain Description: Ere-like Location: 3596-4160 bp Feature: domain Description: Ere-like Location: 3596-4160 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Lysozyme_like (pfam13702), Ere-like (cd14728)

Seq: MOOP01000102.1 Bacillus thuringiensis serovar iberica strain BGSC 4BW1 contig000102, whole genome shotgun sequence (93340 bp)
Overview 1 RT 1: 90220-93332 bp Neighborhood of RT #1 [90220, 93340] RVT-GII HNHc Feature: gene Location: 90220-90897 bp Feature: gene Location: 91140-91331 bp Feature: gene Location: 91619-93340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91919-92621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9 19 19 -9 2621 bp Feature: domain Description: HNHc Note: nucleases Location: 93200-93332 bp Feature: domain Description: HNHc Note: nucleases Location: 9 3200-9 3332 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: MOOP01000100.1 Bacillus thuringiensis serovar iberica strain BGSC 4BW1 contig000100, whole genome shotgun sequence (5467 bp)
Overview 1 RT 1: 589-3973 bp Neighborhood of RT #1 [589, 3973] RVT-GII Intron_maturas2 HNHc RimL Feature: gene Location: 589-2412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 853-1687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 853-1687 bp Feature: domain Description: Intron_maturas2 Location: 1759-2095 bp Feature: domain Description: Intron_maturas2 Location: 1759-2095 bp Feature: domain Description: HNHc Note: nucleases Location: 2233-2389 bp Feature: domain Description: HNHc Note: nucleases Location: 2233-2389 bp Feature: gene Location: 2910-3416 bp Feature: domain Description: RimL Location: 2919-3414 bp Feature: domain Description: RimL Location: 2919-3414 bp Feature: gene Location: 3788-3973 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RimL (COG1670), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)